Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g1667 ATGAGGGAAGATGATTCAAATTGGTTCTCAAAATGGGAACAACAACTTCCTTCTCCTGATGAATTGATGCCTCTTTCCCAAACCCTAATCACCCCTGATCTTGCTTTAGCATTTGATATCACAAACTCAAATCCTCCCATTAATAACAATTCTCATCCACCGCCACCTCCGCCGCCGCCTCCGGTTCTCACTCAGCCGAGTTCTGCAGATTTTGGGGATTCAGGGGATTTAGGGTCTGGCGCTGGCGACGAACCTGCCAGAACCCTGAAACGGCCGCGGCTTGTCTGGACTCCGCAGCTTCATAAGCGATTCGTTGACGCCGTTGCGCATTTGGGGATAAAAAATGCCGTCCCGAAAACCATAATGCAGTTGATGAGCGTCGATGGGTTAACTCGTGAGAACGTAGCTAGCCATTTGCAGAAATACCGTCTTTATTTGAAGCGTATGCAGGGGATTTCCGGCGGTACTGGTGGCGGAGCTAGTGCCGGTGGTGGATTGCCTTCAGCCGCTTCAGATCCTGCCACCGATCATTTGTTTGCTAGTTCCCCTGTTCCGGCTCATTTTCTTCACTCTGCTCGGGGTAATTCCGACCATTTCTTGCCGTTTGTTCCCATCGGAGCTCTGCAGCATCACCACCACCAGATGGCCGCCGCCGCTCAGTACCACCGGCAAGTGGCTCAGTTTGGGTCGCCGTCGAATGGGCAATTTGAGCATCCGTTTTTGGCTCGCCCTGTTCACCGGATTGGAGCTCCGGTGAGTACTCCGGCGACGAATTATAGCGAGGATTTGGATACGGGTAATGGAACAGGAGGGAGGAAGGTTCTTACTCTTTTCCCCACCGGAAATGATTAA 852 52.0 MREDDSNWFSKWEQQLPSPDELMPLSQTLITPDLALAFDITNSNPPINNNSHPPPPPPPPPVLTQPSSADFGDSGDLGSGAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGTGGGASAGGGLPSAASDPATDHLFASSPVPAHFLHSARGNSDHFLPFVPIGALQHHHHQMAAAAQYHRQVAQFGSPSNGQFEHPFLARPVHRIGAPVSTPATNYSEDLDTGNGTGGRKVLTLFPTGND 283
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 31143451 31144302 + CePI673135_10g016670.1 Cec10g1667 214582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g1667 283 FunFam Two-component response regulator 87 150 - -
Cec10g1667 283 MobiDBLite consensus disorder prediction 252 283 - -
Cec10g1667 283 Gene3D - 88 150 - -
Cec10g1667 283 MobiDBLite consensus disorder prediction 37 90 - -
Cec10g1667 283 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 4 233 IPR044841 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec10g1667 283 MobiDBLite consensus disorder prediction 48 65 - -
Cec10g1667 283 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 96 147 IPR017930 -
Cec10g1667 283 NCBIfam myb-like DNA-binding domain, SHAQKYF class 92 144 IPR006447 GO:0003677(InterPro)
Cec10g1667 283 SUPERFAMILY Homeodomain-like 88 148 IPR009057 -
Cec10g1667 283 MobiDBLite consensus disorder prediction 10 24 - -
Cec10g1667 283 MobiDBLite consensus disorder prediction 1 24 - -
Cec10g1667 283 Pfam Myb-like DNA-binding domain 94 143 IPR001005 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g0650 Cec-Chr4:25390308 Cec10g1667 Cec-Chr10:31143451 4.30E-104 dispersed
Cec09g0534 Cec-Chr9:4593510 Cec10g1667 Cec-Chr10:31143451 3.90E-07 dispersed
Cec10g1667 Cec-Chr10:31143451 Cec11g0360 Cec-Chr11:3814227 1.60E-15 dispersed
Cec10g1667 Cec-Chr10:31143451 Cec03g0127 Cec-Chr3:1227256 9.50E-37 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30411 PF00249 Myb_DNA-binding 2.00E-08 CL0123 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g1667 - - - 0.0