Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g1741 ATGGATGACCCTTCCACTAACTTCTTCTTCACAAATCTCTTCAAATTCAACTCTCCCACCACTACCAATTTCCCCCCCCACCACCACCCTTCTTCTTCTTCTTCTTCTTCTTCAAACCCTTTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCCAATTTCTTCCCCACTTTCCACCACCACCACCACGCTCCGCCGCCATCCTCTCCACCGCTCCGCCAAGCTCTCCCTCTCCTTCGCCTTAGCCCCACACGATCATCACAAGAGAAAAACAACAAGGAAGAGGAAAAGGAAGAAACTTTAATGAGAGTTGCACTTCATATAGGGTTACCAAGCCCTAGGGCTGAAGAAGAAGAAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATCAAGAATTAGAAGAAGAAGAAGAATTAGAAGATCAAGAAGAAGAAGAAGAAGTAGCAATTTCAGGATTGTGTTTGAGTAATAGTAGACTTAACAAAGGACAATATTGGATCCCAACTCCTTCACAAATCCTCATTGGACCTACTCAATTCTCTTGTCCTGTTTGTTACAAAACCTTCAATAGATATAACAACATGCAGATGCACATGTGGGGGCATGGGTCACAATACAGGAGAGGACCAGAATCGTTAAGAGGAACACAACCAACAGGGATGTTAAGGCTGCCATGTTATTGCTGCTCACCAGGTTGCCGCAACAACATTGACCATCCAAGAGCAAAGCCTTTAAAGGATTTCAGAACTCTCCAAACTCATTACAAACGCAAGCATGGAATCAAGCCTTTCATGTGTAGGAAATGTGGGAAAGCCTTTGCTGTTAGAGGAGATTGGAGAACTCATGAGAAGAATTGTGGAAAGCTTTGGTATTGCATTTGTGGATCTGATTTTAAGCACAAAAGATCTCTCAAAGACCACATCAAAGCCTTTGGAAATGGCCATGCTGCTTATAATCATTTTAATAATAACGCTAATAACAATAATTCTGATCAACATCGTCGTCATCATCATCGGCATCATCGTCTTCATGGGTTCGATGAAGAGGATGACCATGCTTATTCTGAAGTTGAGCAGGATCATGATTGA 1086 43.0 MDDPSTNFFFTNLFKFNSPTTTNFPPHHHPSSSSSSSSNPFPPPPPPPPPPNFFPTFHHHHHAPPPSSPPLRQALPLLRLSPTRSSQEKNNKEEEKEETLMRVALHIGLPSPRAEEEEGEEEEEEEEEDQELEEEEELEDQEEEEEVAISGLCLSNSRLNKGQYWIPTPSQILIGPTQFSCPVCYKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHAAYNHFNNNANNNNSDQHRRHHHRHHRLHGFDEEDDHAYSEVEQDHD 361
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 32086938 32089587 + CePI673135_10g017410.1 Cec10g1741 214656
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cec10g1741 361 FunFam zinc finger protein WIP2-like 178 201 - -
Cec10g1741 361 MobiDBLite consensus disorder prediction 106 148 - -
Cec10g1741 361 MobiDBLite consensus disorder prediction 37 55 - -
Cec10g1741 361 ProSitePatterns Zinc finger C2H2 type domain signature. 181 201 IPR013087 -
Cec10g1741 361 Gene3D Classic Zinc Finger 178 201 - -
Cec10g1741 361 ProSiteProfiles Zinc finger C2H2 type domain profile. 263 283 IPR013087 -
Cec10g1741 361 MobiDBLite consensus disorder prediction 19 73 - -
Cec10g1741 361 FunFam Zinc finger protein WIP2 232 314 - -
Cec10g1741 361 Pfam BIRD-IDD transcription factor, third C2HC zinc finger 262 286 - -
Cec10g1741 361 MobiDBLite consensus disorder prediction 19 36 - -
Cec10g1741 361 MobiDBLite consensus disorder prediction 115 147 - -
Cec10g1741 361 MobiDBLite consensus disorder prediction 318 361 - -
Cec10g1741 361 Coils Coil 113 148 - -
Cec10g1741 361 PANTHER ZINC FINGER PROTEIN WIP2 27 333 IPR043584 GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0010468(PANTHER)|GO:0010468(InterPro)|GO:0048856(PANTHER)
Cec10g1741 361 SUPERFAMILY beta-beta-alpha zinc fingers 245 283 IPR036236 -
Cec10g1741 361 ProSiteProfiles Zinc finger C2H2 type domain profile. 179 206 IPR013087 -
Cec10g1741 361 SMART c2h2final6 263 283 IPR013087 -
Cec10g1741 361 SMART c2h2final6 179 201 IPR013087 -
Cec10g1741 361 MobiDBLite consensus disorder prediction 342 361 - -
Cec10g1741 361 SUPERFAMILY beta-beta-alpha zinc fingers 175 201 IPR036236 -
Cec10g1741 361 Gene3D Classic Zinc Finger 238 321 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0994 Cec-Chr3:18229877 Cec10g1741 Cec-Chr10:32086938 9.10E-85 dispersed
Cec04g0167 Cec-Chr4:6582323 Cec10g1741 Cec-Chr10:32086938 1.60E-99 dispersed
Cec09g0419 Cec-Chr9:3626026 Cec10g1741 Cec-Chr10:32086938 7.50E-88 dispersed
Cec10g1741 Cec-Chr10:32086938 Cec02g2442 Cec-Chr2:41628104 7.40E-95 transposed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30421 None None None None Cec TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g1741 - - - 0.0