Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec10g1741 | ATGGATGACCCTTCCACTAACTTCTTCTTCACAAATCTCTTCAAATTCAACTCTCCCACCACTACCAATTTCCCCCCCCACCACCACCCTTCTTCTTCTTCTTCTTCTTCTTCAAACCCTTTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCCAATTTCTTCCCCACTTTCCACCACCACCACCACGCTCCGCCGCCATCCTCTCCACCGCTCCGCCAAGCTCTCCCTCTCCTTCGCCTTAGCCCCACACGATCATCACAAGAGAAAAACAACAAGGAAGAGGAAAAGGAAGAAACTTTAATGAGAGTTGCACTTCATATAGGGTTACCAAGCCCTAGGGCTGAAGAAGAAGAAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATCAAGAATTAGAAGAAGAAGAAGAATTAGAAGATCAAGAAGAAGAAGAAGAAGTAGCAATTTCAGGATTGTGTTTGAGTAATAGTAGACTTAACAAAGGACAATATTGGATCCCAACTCCTTCACAAATCCTCATTGGACCTACTCAATTCTCTTGTCCTGTTTGTTACAAAACCTTCAATAGATATAACAACATGCAGATGCACATGTGGGGGCATGGGTCACAATACAGGAGAGGACCAGAATCGTTAAGAGGAACACAACCAACAGGGATGTTAAGGCTGCCATGTTATTGCTGCTCACCAGGTTGCCGCAACAACATTGACCATCCAAGAGCAAAGCCTTTAAAGGATTTCAGAACTCTCCAAACTCATTACAAACGCAAGCATGGAATCAAGCCTTTCATGTGTAGGAAATGTGGGAAAGCCTTTGCTGTTAGAGGAGATTGGAGAACTCATGAGAAGAATTGTGGAAAGCTTTGGTATTGCATTTGTGGATCTGATTTTAAGCACAAAAGATCTCTCAAAGACCACATCAAAGCCTTTGGAAATGGCCATGCTGCTTATAATCATTTTAATAATAACGCTAATAACAATAATTCTGATCAACATCGTCGTCATCATCATCGGCATCATCGTCTTCATGGGTTCGATGAAGAGGATGACCATGCTTATTCTGAAGTTGAGCAGGATCATGATTGA | 1086 | 43.0 | MDDPSTNFFFTNLFKFNSPTTTNFPPHHHPSSSSSSSSNPFPPPPPPPPPPNFFPTFHHHHHAPPPSSPPLRQALPLLRLSPTRSSQEKNNKEEEKEETLMRVALHIGLPSPRAEEEEGEEEEEEEEEDQELEEEEELEDQEEEEEVAISGLCLSNSRLNKGQYWIPTPSQILIGPTQFSCPVCYKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHAAYNHFNNNANNNNSDQHRRHHHRHHRLHGFDEEDDHAYSEVEQDHD | 361 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 32086938 | 32089587 | + | CePI673135_10g017410.1 | Cec10g1741 | 214656 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec10g1741 | 361 | FunFam | zinc finger protein WIP2-like | 178 | 201 | - | - | |
Cec10g1741 | 361 | MobiDBLite | consensus disorder prediction | 106 | 148 | - | - | |
Cec10g1741 | 361 | MobiDBLite | consensus disorder prediction | 37 | 55 | - | - | |
Cec10g1741 | 361 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 181 | 201 | IPR013087 | - | |
Cec10g1741 | 361 | Gene3D | Classic Zinc Finger | 178 | 201 | - | - | |
Cec10g1741 | 361 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 263 | 283 | IPR013087 | - | |
Cec10g1741 | 361 | MobiDBLite | consensus disorder prediction | 19 | 73 | - | - | |
Cec10g1741 | 361 | FunFam | Zinc finger protein WIP2 | 232 | 314 | - | - | |
Cec10g1741 | 361 | Pfam | BIRD-IDD transcription factor, third C2HC zinc finger | 262 | 286 | - | - | |
Cec10g1741 | 361 | MobiDBLite | consensus disorder prediction | 19 | 36 | - | - | |
Cec10g1741 | 361 | MobiDBLite | consensus disorder prediction | 115 | 147 | - | - | |
Cec10g1741 | 361 | MobiDBLite | consensus disorder prediction | 318 | 361 | - | - | |
Cec10g1741 | 361 | Coils | Coil | 113 | 148 | - | - | |
Cec10g1741 | 361 | PANTHER | ZINC FINGER PROTEIN WIP2 | 27 | 333 | IPR043584 | GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0010468(PANTHER)|GO:0010468(InterPro)|GO:0048856(PANTHER) | |
Cec10g1741 | 361 | SUPERFAMILY | beta-beta-alpha zinc fingers | 245 | 283 | IPR036236 | - | |
Cec10g1741 | 361 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 179 | 206 | IPR013087 | - | |
Cec10g1741 | 361 | SMART | c2h2final6 | 263 | 283 | IPR013087 | - | |
Cec10g1741 | 361 | SMART | c2h2final6 | 179 | 201 | IPR013087 | - | |
Cec10g1741 | 361 | MobiDBLite | consensus disorder prediction | 342 | 361 | - | - | |
Cec10g1741 | 361 | SUPERFAMILY | beta-beta-alpha zinc fingers | 175 | 201 | IPR036236 | - | |
Cec10g1741 | 361 | Gene3D | Classic Zinc Finger | 238 | 321 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec03g0994 | Cec-Chr3:18229877 | Cec10g1741 | Cec-Chr10:32086938 | 9.10E-85 | dispersed | |
Cec04g0167 | Cec-Chr4:6582323 | Cec10g1741 | Cec-Chr10:32086938 | 1.60E-99 | dispersed | |
Cec09g0419 | Cec-Chr9:3626026 | Cec10g1741 | Cec-Chr10:32086938 | 7.50E-88 | dispersed | |
Cec10g1741 | Cec-Chr10:32086938 | Cec02g2442 | Cec-Chr2:41628104 | 7.40E-95 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
30421 | None | None | None | None | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec10g1741 | - | - | - | 0.0 |