Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g1745 ATGGAGATTAAAGTAGGGACTGTAGTTGGATCCAGTCCAATCGGGCGTCAATCGGATGATACTGGACTTGAGTCGCTTCAATTCTGCGAAGACATTCAGGGGTTGATGACGATTCCGGCGGAAAATGCTAGCTCCTTCACGGCACTTCTGGAACTTCCGGCGACGCAGGCTTTAGAGCTACTCCACTCGCCGGATTCCGGCGGTGGCGCCACGGCGGCGGTTGTGAACGATGATTCCGTTCAACACTGTATCAAAGACGTTCCGAAACCCTACTTCAGTGCCTTCAATTGCAATTTGACCTTCCCGACGAACTCGGGTCTAATTGAACGCGCTGCCAAGCTCTCGGTCTTGGCCGAAGAGCATTCGCCGGAGACGACTAGTTCAGTGCCGTTGAATTCGAGTGTGAATTTGGAGAAGGTGAAGAACGAGCCCACCACTGAAACCGATTCGAACCCTAATCCCTTGCAGACTTTAATCTCCGATCCGACGGTGGAGAACACGAACCAGAGATCGGCGAAGAGGAAGGAGCGCGAGAAAAAGGGAAAAGGGTCAACAAAGAAGAGCAAGAACGAAAGCAACGAGGATGCCGAAAAGCTTCCTTATGTTCATGTCCGAGCTCGCCGTGGTCAAGCGACAGACAGCCATAGCCTAGCAGAACGAGCGAGGAGAGAGAAAATCAATGCTCGAATGAAGCTACTTCAAGAACTGGTCCCTGGCTGCAATAAGATCTCAGGCACAGCCCTAGTGTTGGATGAAATCATCAACCATGTACAATCACTGCAGCGTCAGGTGGAGTTCTTGTCAATGAGGCTTGCAGCAGTTAACCCCAGAGTTGATTTCAACATTGATAGCATATTGGCTGCAGAAAATGAACCCGTACTCGAAAGCTCGCCATTGATGTGGCCAGAAATCCCAGTAAGTGGAACAAGACAACAATATCAACCCCAATGGCATTTTGATGGTTCAGTTAACCAGCAAGCTTGGGCGAGGGATGAACATAATCATCATAATTTCAGCACTCCTGAAAACTCTCTTTTAAGTTATGATTCTTCAGCAAATTCAGCATCTCTGCACTCAAATCAATTGAAGATGGAGCTGTGA 1101 48.86 MEIKVGTVVGSSPIGRQSDDTGLESLQFCEDIQGLMTIPAENASSFTALLELPATQALELLHSPDSGGGATAAVVNDDSVQHCIKDVPKPYFSAFNCNLTFPTNSGLIERAAKLSVLAEEHSPETTSSVPLNSSVNLEKVKNEPTTETDSNPNPLQTLISDPTVENTNQRSAKRKEREKKGKGSTKKSKNESNEDAEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIINHVQSLQRQVEFLSMRLAAVNPRVDFNIDSILAAENEPVLESSPLMWPEIPVSGTRQQYQPQWHFDGSVNQQAWARDEHNHHNFSTPENSLLSYDSSANSASLHSNQLKMEL 366
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 32130978 32135342 - CePI673135_10g017450.1 Cec10g1745 214660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g1745 366 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 210 260 IPR011598 GO:0046983(InterPro)
Cec10g1745 366 MobiDBLite consensus disorder prediction 120 167 - -
Cec10g1745 366 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 119 334 IPR024097 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(InterPro)
Cec10g1745 366 MobiDBLite consensus disorder prediction 119 201 - -
Cec10g1745 366 Pfam Helix-loop-helix DNA-binding domain 214 261 IPR011598 GO:0046983(InterPro)
Cec10g1745 366 MobiDBLite consensus disorder prediction 183 201 - -
Cec10g1745 366 SMART finulus 216 266 IPR011598 GO:0046983(InterPro)
Cec10g1745 366 Coils Coil 250 270 - -
Cec10g1745 366 Gene3D - 207 280 IPR036638 GO:0046983(InterPro)
Cec10g1745 366 FunFam transcription factor bHLH48-like isoform X1 207 279 - -
Cec10g1745 366 CDD bHLH_AtBPE_like 200 285 - -
Cec10g1745 366 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 208 279 IPR036638 GO:0046983(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec10g1745 Cec-Chr10:32130978 Cec11g0454 Cec-Chr11:4814712 8.20E-33 dispersed
Cec10g1745 Cec-Chr10:32130978 Cec02g0524 Cec-Chr2:4933702 3.90E-35 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30422 PF00010 HLH 1.40E-05 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g1745 - - - 0.0