Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g1751 ATGGCTTCTTCCAATATTAAAAGCACCTCCATCATCCAACAAGCAAACCAGCAAGAAGAAGAAAAACAACAACAACAACTTCTTCATCATCATCAACAACAACAACCTCAACTTTTACAAACTCCAAGCTTTGTCATCTCATCAAACTCAAAAAATTCCTCATTATTCAACTTCCAAAACCCCAATTTTCCTGATCATCATCATCATCATCAATTACCCTTCTCCATGAATCTCCCTTCCATCTCTTCAAATTTCTTAAGCAAAGATGGAGGAGGAGATGATTTGGGGGAATTGGATCAAGCTCTTTTTCTCTATCTTGATGGGCAAGAGCCCTCTACAACCACTACTCAAGACCAAAGACAGAGTTTGGGCATGAGACCTCCGACTTTGAACATCTTCCCGTCGCAGCCGATGCATGTCGACCCGTTACCAATAAAAGGAAATACAGCATTGATAAACCATAGTGATTCAAAGATCAAAGCATCTGAGCCGTCCAGAGAGTTGGCCAACCAACGCAGCAGCAATGGAGCCACTGCATCTGGACCACCCCCAACCCAAACTGCAACAACCGAACCTCATCCCAAACCTCCCAAACGTGAGCCCAACAAAAAAGGACTAACCTCAAGCTCAGAACAAGAAGGACCCAAAACCCCAGACCCCAAGACCTTAAGAAGATTGGCTCAGAATCGAGAGGCCGCTAGAAAAAGCAGACTTAGAAAAAAGGCGTATGTTCAGCAGTTAGAGATGAGTAGGATTAAGCTCACCCAGCTGGAGCAAGAACTACAAAGAGCAAGAACTCAGGGCATGTTTCTGGGTGGAGGAGCCGCCATTTTAGGACCTGACCAAGGACTTCCCTCTGGCTTCCATAACCTCAGCTCCGATGCTGCGGTGTTCGACATTGAGTATGGGCGGTGGCAAGAGGAGCACCACCGGCTAATGTGCGAGCTCCGAGCAGCAGTGCAAGAGCAGCTACCGGAGAACGAGTTGCGGTTGTTCGTGGACAGCTGCCTGGCCCATTACGACGAGGTTCTGAACTTGAAGATGATGGTGGCTAAGTCGGACGTGTTCCACCTTGTCTCCGGCATGTGGAAAACGCCGGCGGAGAGATGCTTCATGTGGATGGGAGATTTTAGGCCCTCCGAACTCATTAAGATAATAATGGGTCAACTAGAGCCATTAACAGAGCATCAAATATTAAACATTTGTGCATTGCAACAATCAACACAAGAGAGTGAAGAAGCATTGTCTCAAGGACTTGAAGCCCTAAATCAGTCCTTATCAGACACCATCACCTCTGATTCATTGAGTAGCCCTCCCAATATGGCTAACTATATGGGCCAAATGACCTTAGCCATCAACAAGCTCTCCACTCTTGAAGGCTTTGTAAGACAGGCAGAGAATTTGAGACACCAAACGATTCACCGATTGCAACAAATGTTGACAACTCGACAAGCAGCAAGATGTTTATTAGCCATTGCTGAATATTTTCATAGGCTTCGAGCTTTGAGTTCCCTATGGTTGGCTCGTCCAAGGCAAGATTAA 1542 46.04 MASSNIKSTSIIQQANQQEEEKQQQQLLHHHQQQQPQLLQTPSFVISSNSKNSSLFNFQNPNFPDHHHHHQLPFSMNLPSISSNFLSKDGGGDDLGELDQALFLYLDGQEPSTTTTQDQRQSLGMRPPTLNIFPSQPMHVDPLPIKGNTALINHSDSKIKASEPSRELANQRSSNGATASGPPPTQTATTEPHPKPPKREPNKKGLTSSSEQEGPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLEMSRIKLTQLEQELQRARTQGMFLGGGAAILGPDQGLPSGFHNLSSDAAVFDIEYGRWQEEHHRLMCELRAAVQEQLPENELRLFVDSCLAHYDEVLNLKMMVAKSDVFHLVSGMWKTPAERCFMWMGDFRPSELIKIIMGQLEPLTEHQILNICALQQSTQESEEALSQGLEALNQSLSDTITSDSLSSPPNMANYMGQMTLAINKLSTLEGFVRQAENLRHQTIHRLQQMLTTRQAARCLLAIAEYFHRLRALSSLWLARPRQD 513
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 32194494 32202555 - CePI673135_10g017510.1 Cec10g1751 214666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g1751 513 MobiDBLite consensus disorder prediction 166 186 - -
Cec10g1751 513 Pfam Basic region leucine zipper 218 262 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec10g1751 513 MobiDBLite consensus disorder prediction 108 129 - -
Cec10g1751 513 SUPERFAMILY Leucine zipper domain 221 263 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec10g1751 513 ProSiteProfiles DOG1 domain profile. 295 509 IPR025422 GO:0006351(InterPro)|GO:0043565(InterPro)
Cec10g1751 513 Gene3D - 220 270 - -
Cec10g1751 513 PANTHER TRANSCRIPTION FACTOR TGA9 129 512 - -
Cec10g1751 513 MobiDBLite consensus disorder prediction 1 37 - -
Cec10g1751 513 CDD bZIP_HBP1b-like 221 273 - -
Cec10g1751 513 MobiDBLite consensus disorder prediction 108 224 - -
Cec10g1751 513 Coils Coil 240 267 - -
Cec10g1751 513 SMART brlzneu 217 297 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec10g1751 513 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 224 239 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec10g1751 513 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 219 263 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec10g1751 513 Pfam Seed dormancy control 313 387 IPR025422 GO:0006351(InterPro)|GO:0043565(InterPro)
Cec10g1751 513 FunFam BZIP family transcription factor 220 269 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g2325 Cec-Chr2:40569015 Cec10g1751 Cec-Chr10:32194494 2.00E-91 dispersed
Cec10g1646 Cec-Chr10:30977939 Cec10g1751 Cec-Chr10:32194494 1.20E-87 dispersed
Cec10g1751 Cec-Chr10:32194494 Cec11g0786 Cec-Chr11:9252329 6.10E-66 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30424 PF14144 DOG1 6.10E-31 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g1751 K14431 - csv:101204923 885.945