Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g1755 ATGGCTCAACTTTCCACTATTACGCATCCTCAAGCATTTTCTAACGGCCTAACCGTTGCAGCCGACGTGGACGCCAGCTCATCAAATTCCCTCAAATGCAAAAACTTCGTCGTCTTCATCGCCGCAATATCTCTTCTTGATTTCTTGCTTGTGTTCGATTCTTTGTTCCATGGAAACAGAGAAACATCAAACTGGACAGTGTTTTTTTTTGGAGAAATGCTCCAACAGCGTCTGCTTACGTATTTTAGTGTCGTTGTCTATTCGACGATTCTGACTTCGCGGGTTTGGGCATTCACTAATCCGCCGCATGTTATAGCTCTTCAGGGTCTGTATAGTGCTATGAACTACCCACTAGAGCTTAAAGGATGGAGAAAAGAAGGTGGAGATCCCTGTGAGGAATCATGGACTGGAGTGTCTTGCTCCGGTTCTTCTGTAATATACCTTAAACTCCATGGACTAAATCTCACTGGGAATCTTGGAGGGCAGCTCAGCAACCTCATCGATTTGAAGCAACTGGATGTTAGCTCTAATAGACTTATGGGTGAAATTCCGCACAACTTGCCTCCTAATGCGACTCACATAAATATGGCATTCAACCATTTCAGCCAAAATCTTCCACATACTTTATCTTACATGGGACGTCTCCGACATCTAAATCTGAGCCATAATACTCTATCTGGTGTGATTGGGAATGTGTTCACTGGTTTACAGAATTTGAGAGAGATGGATTTATCATATAATGACTTCGCTGGAGATTTGCCAAGTTCATTTGGTTCCCTGACAAACATCACTAGACTGTTCTTGCAGAATAACAAATTCACTGGATCAGTTGCCTACTTGTCTCGCCTTCCATTAATTGACTTAAACATCCAAGACAATTATTTTAGTGGCATTATTCCAAAAAATTTTAGAAATATTCCAAATTTGTGGATTGGGGGCAATAGGTTTCGTCCAGAAGTCAATTCTCCACCCTGGGACTTTCCCCTGGAAAAAGCACCTATGGTGCAGAACATCAGTGGCCCTCCAACAACCAAGTCAAACGCCATCCAGAATTATCCCTCTCGGGGTGTAGTCAGGCATGAGAAGAAAAGGCTTGGTCCGGGTGGAATTGTTCTCCTGGTTGGAGGGTTAACACTAGTAGTTAGCTTTGCAGCTCTCTTTTTCGTATTTTCCATGAAGAAAGTGCATGACAAGAAAATAAATTTGAAGATTGGCAATATGTTACCTCGTTCTCTTCCTCTGGGCAAAGCTGAAGATGGTTCGTCTACTGCAACAGAAGAGAGCTCACAAAGCTTTCCCCTGAGTTCACTACTCATGGGTGGTCCAAGGCCTATACCTTTATTAAATCACACGAGAACTGAGAAAGTTTCTGGAAGAAAAGGTTTTTCGAAGAGATGCAGGCTCCCAGTGAGAACAAAAATTTACACTCTGACAGAGCTTCAATCCGCTACAAACAAGTTTAGTCAAGAGAATCTTTTGGGAGAGGGATCTCTTGGTGCTGTTTATAGAGCTGAATTTCCTGATGGCCAAGTTTTGGCGGTGAAAAATATCAACATGGGAGAGCTCTCCTTTACAGAAGAAGAGCAATTTCTGGATGTGGTATGGACTGCTTCCCGTTTGAGGCACCCAAACATTGTTACACTGCTTGGATATTGTGTAGAGCATGGGCAACATATACTCGGATATGAATATGTTCGAAATCTGTCTCTTGATGACGCTTTACACTGTGAAGCATACATGCCTCTGTCATGGACTGTCCGTCTCCAGATTGCTCTTGGAGTTGCCAGGGCTTTAGATTATCTGCATACAAGTTTTTTCCCTCCATTTGCTCACTGCAATCTGAAGGCTGCCAACATCTTACTGGATGAAGAACTGACGCCTCGTATTTGTGATTGTGGGCTGTCGGTTTTGAGGCCACTTGTGACCAATAGAGTTAAAACGAAGGCTTCTGAGATTGTCAGTGGTGATAGAGGCTACCTTGCACCTGAACATGGCCAGCCAGGATTTGATAATACCAGAAGTGACGTGTATTCTTTTGGAGTGTTGCTTTTGGAGCTTGTCACAGGGAGAAAACCATTTGACAATTCGAAACCGAGGAAGGAGCAATTGCTGGTGAAATGGGCTTCATCTCGGCTTCATGACAACGAGAGTTTAGAACAGATGGTTGATCCAGGCATCAAAGGAACATTTTCCTCCAAGGCTCTCTCACGCTTTGTCGATATTATCTCCCTTTGTATACAGTCTGTGAAAGAATTTCGATCGCCAATGTCTGAAATAGTGGAACATCTAACAAATCTTCAAAGAAAGATGGAAATGGTGAAACGTGCTACAGCGGATGGAACTGAAGTGGATCCTTTTGAGAAATCCTTTCGTTCTACCAATACTGGCTTTCTCATCAGTTGTTCTGTACTCAAGAACTTCGTCTTCTCCATTGTCATACTCTCAGTTTACACTCCACTCTGCTCTTCTCTTCCCTCTGGGACGAAACTCCGTGCGTTACTGTATTCCAGTGTCCTTGTCTTCTTGGCAATTCTGACTTCAGTCGTTCAGTGCTTTACTGACCCGTTCGATGTTATAGCTCTTCTCAATCTATATAGTACCCTAAATTACCCACCTGAGCTTAAAGGATGGAGAACAGATGGTGGGGATCCTTGCGATGGAACGTGGACTGGGGTGTTTTGTGTTGGTTCTTCTGTAATAAACCTTAAACTTAATAGACTAAACCTTTCTGGGAATCTTGGAGACCAGCTTTATCTTCTCCATAATTTGAAGCAACTGGATGCTAGTTCCAATTCAATTCTGGGTGCATTTCCTTCTGGCTTACCCCCAAATGTCACTTCTGTGAATCTAAGCCATAATGTCCTATCTGGCCCCATCGGGAATGCTTTTTCTGGCTTACAAAATCTTGTGGAGATGGATCTGTCATATAACGATTTCACTGGAGATTTACCAAGTTCATTTGCTTCCTTGACTAATATCAATAGACTGTTCTTGCAGAAAAACAAATTCACAGGATCGATTTCCTACTTATCTGACCTTCCATTGACTGATTTGAACATCCAAGACAATTACTTTAGTGGCACTATTCCAGAGCATTTCAAGACAATTCCAAATTTATGGATTGGGGGAAATAGGTTCGATGTAAGTAATTCTCCACCCTGGGATTTTTCTGTGGAAACAACACCTTTGACTCGAAACAATAGTAGCTTTCCATTAACAGAACCGATTATCATTGAGAAATGTCCCTACAAGAAAAAGGGGGGGAAAGGGGGGGAAAGATTGGGCCCTGCTGGAATAGCTATAGTGGCTGGTGGAGGTGGTTTTGTAATAATCTTTGCAGCTCTCTTTATTGCAATCTGCAACACACAAATATGTGCAAAGCAAAGGAGCATGAAGCACGTCAACGTGTCTCTTCCAGTCAGCAAAGCTGAAGACGGTTATTCCACCGCACCAGTTGGCAGCCCCCATATCTTGCCTCTCAGTTCTCCAGACATAGGTGGCAGTCTGAATCATGCATGTCCTACTCGTCATGCTAGAACTGAGAGGGGATGTAGCAGAAGTTTCTCTAAGAGATCCTGGTTCCCAGAAAAAACAAAAACTTACACCGTCACAGAGCTCGAATCCGCTACTAACAAGTACAGTGAAGAAAACCTTCTTGGAGAGGGATCTCTTGGTTCTGTTTATAAAGCTGAATTTCCTGATGGCCAAATTTTGGCTGTGAAGAGGGTTGATATGGCGGCACTCTCTTTCACACAAGAACAACAGTTTCTGGATGTGGTCTGCACTGTTTCCCGTTTGAGGCACCCTAACATTGTTCGCCTTCTTGGATACAGTGTAGAGAATGGACAACATTTACTAGCCTATGAGTACGTCAGGAATCTGTCTCTTGACGATGCTCTACACAGTGTAGCACACAACCCTCTATCGTCGAGTGTTCGAATCCAAATTGCTCATGGAGTTGCCAAGGCTTTGGATTACTTGCATAATGCCTTTTTCCCCCCATTTGCTCACTGCAATTTGAAGGCCGCCAACATCATGCTTGATGAAGAATTCATGCCAAAGATTTGTGACTGTGGTTTGTCTGTTTTGAAGCCACTTGTTAGCAATAGAGTTAAAATCAAGGCTGCTCAAATTGCTTTTGCTGACACTGGCTACTTTGCACCTGAATATGGCCAATCTGGGATTGATCATACCAAAAGTGATGTGTATGCATTCGGAGTGTTGTTTCTGGAGCTTATTACCGCAAAGAAACCAAACGATTTGAGACCAGGGATCGAGCAATCTCTGTCAAGATGGGCGTCATTTCAGCTTCACGACTGTGAGAGTCTAGATGAGATTATTGATCCTGAGATTAAAGGAACATTATCCTCCAAGGTTCTCTCTCGCTGTGCTGATATTATCACCCTTTGCATACAGCCTGTAATGGAACGTCGGCCACCCATGTTTGCCATTGTTGGATACCTGGCAAGTATTCAAAGAAGGTTCGAGATGGAAAAACGTGCTGCAGCGGAAGGTAAAGTAGTTGACACTTTCGAGAAATCCTTCCACACAACTAACACAGGGATTGTAAGACATCCTAACAAGACTGTCATTGGCATCAATGCTATCAATCGTCGCTTCTGGGTTCGTGCTATGATGGAGGACGCATCAAAGAACGGCGTCCTGGCCGTCCAAACGCTAAGGAACAACATAATGGCGTCTACTCTTCTGGCATCTACGGCGATAATGCTCTGTTCTCTAATCGCCGTCTTAATGACAAGCGGCGGCCACAGCGAATCTCCATTAGTCGTACTCGGCGACAGAAGCCAGTTCAGTTTCTCCATCAAATTTTTCGCCATTTTGCTTTGCTTTCTCGTAGCATTTTTGTTCAATGTTCAATCCATTAGGTATTATAGCCATGCCAGCATTCTGATCAACACGCCTTTCAAGAAAATTGCAATCGACGATCATAACCAACGGCTCACGGCGGAATACGTGGCGGCGACGGTGAACAGAGGCAGCTATTTCTGGTCGTTGGGATTGCGAGCTTTCTACTTCTCGTTTCCTCTGTTTTTGTGGATTTTTGGACCTATTCCTATGTTTTCTTCTTCATTTCTGCTTGTTTTTATGCTTTATTTCCTTGATGCTACTTTTGAATTCTGCTGGACGGATGGGAATTTGGATTACCTTCCTCAAAGAGACGAAGAAGAGGAAATTGGGAAATAG 5205 43.42 MAQLSTITHPQAFSNGLTVAADVDASSSNSLKCKNFVVFIAAISLLDFLLVFDSLFHGNRETSNWTVFFFGEMLQQRLLTYFSVVVYSTILTSRVWAFTNPPHVIALQGLYSAMNYPLELKGWRKEGGDPCEESWTGVSCSGSSVIYLKLHGLNLTGNLGGQLSNLIDLKQLDVSSNRLMGEIPHNLPPNATHINMAFNHFSQNLPHTLSYMGRLRHLNLSHNTLSGVIGNVFTGLQNLREMDLSYNDFAGDLPSSFGSLTNITRLFLQNNKFTGSVAYLSRLPLIDLNIQDNYFSGIIPKNFRNIPNLWIGGNRFRPEVNSPPWDFPLEKAPMVQNISGPPTTKSNAIQNYPSRGVVRHEKKRLGPGGIVLLVGGLTLVVSFAALFFVFSMKKVHDKKINLKIGNMLPRSLPLGKAEDGSSTATEESSQSFPLSSLLMGGPRPIPLLNHTRTEKVSGRKGFSKRCRLPVRTKIYTLTELQSATNKFSQENLLGEGSLGAVYRAEFPDGQVLAVKNINMGELSFTEEEQFLDVVWTASRLRHPNIVTLLGYCVEHGQHILGYEYVRNLSLDDALHCEAYMPLSWTVRLQIALGVARALDYLHTSFFPPFAHCNLKAANILLDEELTPRICDCGLSVLRPLVTNRVKTKASEIVSGDRGYLAPEHGQPGFDNTRSDVYSFGVLLLELVTGRKPFDNSKPRKEQLLVKWASSRLHDNESLEQMVDPGIKGTFSSKALSRFVDIISLCIQSVKEFRSPMSEIVEHLTNLQRKMEMVKRATADGTEVDPFEKSFRSTNTGFLISCSVLKNFVFSIVILSVYTPLCSSLPSGTKLRALLYSSVLVFLAILTSVVQCFTDPFDVIALLNLYSTLNYPPELKGWRTDGGDPCDGTWTGVFCVGSSVINLKLNRLNLSGNLGDQLYLLHNLKQLDASSNSILGAFPSGLPPNVTSVNLSHNVLSGPIGNAFSGLQNLVEMDLSYNDFTGDLPSSFASLTNINRLFLQKNKFTGSISYLSDLPLTDLNIQDNYFSGTIPEHFKTIPNLWIGGNRFDVSNSPPWDFSVETTPLTRNNSSFPLTEPIIIEKCPYKKKGGKGGERLGPAGIAIVAGGGGFVIIFAALFIAICNTQICAKQRSMKHVNVSLPVSKAEDGYSTAPVGSPHILPLSSPDIGGSLNHACPTRHARTERGCSRSFSKRSWFPEKTKTYTVTELESATNKYSEENLLGEGSLGSVYKAEFPDGQILAVKRVDMAALSFTQEQQFLDVVCTVSRLRHPNIVRLLGYSVENGQHLLAYEYVRNLSLDDALHSVAHNPLSSSVRIQIAHGVAKALDYLHNAFFPPFAHCNLKAANIMLDEEFMPKICDCGLSVLKPLVSNRVKIKAAQIAFADTGYFAPEYGQSGIDHTKSDVYAFGVLFLELITAKKPNDLRPGIEQSLSRWASFQLHDCESLDEIIDPEIKGTLSSKVLSRCADIITLCIQPVMERRPPMFAIVGYLASIQRRFEMEKRAAAEGKVVDTFEKSFHTTNTGIVRHPNKTVIGINAINRRFWVRAMMEDASKNGVLAVQTLRNNIMASTLLASTAIMLCSLIAVLMTSGGHSESPLVVLGDRSQFSFSIKFFAILLCFLVAFLFNVQSIRYYSHASILINTPFKKIAIDDHNQRLTAEYVAATVNRGSYFWSLGLRAFYFSFPLFLWIFGPIPMFSSSFLLVFMLYFLDATFEFCWTDGNLDYLPQRDEEEEIGK 1734
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 32243901 32259248 - CePI673135_10g017550.1 Cec10g1755 214670

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g1755 1734 SUPERFAMILY L domain-like 103 310 - -
Cec10g1755 1734 FunFam Leucine-rich repeat receptor-like protein kinase 565 774 - -
Cec10g1755 1734 Gene3D Phosphorylase Kinase; domain 1 450 564 - -
Cec10g1755 1734 Gene3D Phosphorylase Kinase; domain 1 1175 1290 - -
Cec10g1755 1734 SMART LRR_typ_2 236 259 IPR003591 -
Cec10g1755 1734 SMART LRR_typ_2 260 283 IPR003591 -
Cec10g1755 1734 SMART LRR_typ_2 966 989 IPR003591 -
Cec10g1755 1734 SMART LRR_typ_2 920 948 IPR003591 -
Cec10g1755 1734 SMART LRR_typ_2 166 190 IPR003591 -
Cec10g1755 1734 SMART LRR_typ_2 212 235 IPR003591 -
Cec10g1755 1734 SUPERFAMILY L domain-like 851 1040 - -
Cec10g1755 1734 Gene3D Ribonuclease Inhibitor 854 1078 IPR032675 -
Cec10g1755 1734 Gene3D Ribonuclease Inhibitor 102 331 IPR032675 -
Cec10g1755 1734 MobiDBLite consensus disorder prediction 413 435 - -
Cec10g1755 1734 ProSiteProfiles Protein kinase domain profile. 1213 1495 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec10g1755 1734 Pfam Leucine rich repeat N-terminal domain 106 141 IPR013210 -
Cec10g1755 1734 Pfam Leucine rich repeat N-terminal domain 857 894 IPR013210 -
Cec10g1755 1734 Gene3D Transferase(Phosphotransferase) domain 1 1291 1514 - -
Cec10g1755 1734 Gene3D Transferase(Phosphotransferase) domain 1 565 787 - -
Cec10g1755 1734 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 452 564 - -
Cec10g1755 1734 MobiDBLite consensus disorder prediction 421 435 - -
Cec10g1755 1734 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 1178 1290 - -
Cec10g1755 1734 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 945 1056 - -
Cec10g1755 1734 FunFam Leucine-rich repeat receptor-like protein kinase 1291 1499 - -
Cec10g1755 1734 Pfam Protein kinase domain 1213 1482 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec10g1755 1734 Pfam Protein kinase domain 488 762 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec10g1755 1734 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 100 327 - -
Cec10g1755 1734 ProSiteProfiles Protein kinase domain profile. 487 765 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec10g1755 1734 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 103 767 IPR046959 -
Cec10g1755 1734 Pfam Leucine rich repeat 943 1003 IPR001611 GO:0005515(InterPro)
Cec10g1755 1734 Pfam Leucine rich repeat 214 273 IPR001611 GO:0005515(InterPro)
Cec10g1755 1734 SUPERFAMILY Protein kinase-like (PK-like) 464 764 IPR011009 -
Cec10g1755 1734 Pfam Protein of unknown function, DUF599 1521 1711 IPR006747 -
Cec10g1755 1734 SUPERFAMILY Protein kinase-like (PK-like) 1188 1487 IPR011009 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g1755 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g1625 Cec-Chr1:30897082 Cec10g1755 Cec-Chr10:32243901 5.80E-45 dispersed
Cec06g1654 Cec-Chr6:30144880 Cec10g1755 Cec-Chr10:32243901 4.90E-35 dispersed
Cec09g0147 Cec-Chr9:1305249 Cec10g1755 Cec-Chr10:32243901 7.10E-90 dispersed
Cec10g1755 Cec-Chr10:32243901 Cec09g1058 Cec-Chr9:10293323 2.30E-56 dispersed
Cec10g1755 Cec-Chr10:32243901 Cec07g1541 Cec-Chr7:30982735 9.10E-98 transposed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cec02g0135 . 65 817 Strubbelig Receptor Gene Family AT4G03390 62.2 5.5e-204 708.0
Cec04g1985 . 17 752 Strubbelig Receptor Gene Family AT4G03390 52.1 8.6e-165 577.8
Cec09g0147 . 470 764 Strubbelig Receptor Gene Family AT4G03390 58.7 5.7e-92 335.9
Cec10g1755 . 73 798 Strubbelig Receptor Gene Family AT5G06820 53.8 6.4e-186 647.9
Cec08g0512 . 22 704 Strubbelig Receptor Gene Family AT1G78980 60.4 1.4e-193 673.3
Cec09g0147 . 101 767 Strubbelig Receptor Gene Family AT1G78980 50.1 1.5e-120 430.6
Cec08g0512 . 20 682 Strubbelig Receptor Gene Family AT3G13065 53.7 3.2e-147 519.2
Cec09g0147 . 99 762 Strubbelig Receptor Gene Family AT3G13065 50.6 3.5e-101 366.3
Cec01g0983 . 388 681 Strubbelig Receptor Gene Family AT1G11130 53.4 6.0e-85 312.4
Cec10g1755 . 73 798 Strubbelig Receptor Gene Family AT5G06820 53.8 6.4e-186 647.9
Cec02g0135 . 65 817 Strubbelig Receptor Gene Family AT4G03390 62.2 5.5e-204 708.0
Cec04g1985 . 17 752 Strubbelig Receptor Gene Family AT4G03390 52.1 8.6e-165 577.8
Cec09g0147 . 470 764 Strubbelig Receptor Gene Family AT4G03390 58.7 5.7e-92 335.9
Cec08g0512 . 20 682 Strubbelig Receptor Gene Family AT3G13065 53.7 3.2e-147 519.2
Cec09g0147 . 99 762 Strubbelig Receptor Gene Family AT3G13065 50.6 3.5e-101 366.3
Cec08g0512 . 22 704 Strubbelig Receptor Gene Family AT1G78980 60.4 1.4e-193 673.3
Cec09g0147 . 101 767 Strubbelig Receptor Gene Family AT1G78980 50.1 1.5e-120 430.6
Cec07g1541 . 1 813 Strubbelig Receptor Gene Family AT1G53730 52.1 3.8e-199 691.8
Cec09g0147 . 95 789 Strubbelig Receptor Gene Family AT1G53730 60.7 8.0e-181 630.9
Cec08g0512 . 20 690 Strubbelig Receptor Gene Family AT1G53730 50.5 7.5e-155 544.7
Cec01g0983 . 9 689 Strubbelig Receptor Gene Family AT1G53730 51.4 3.4e-147 519.2
Cec09g0147 . 95 779 Strubbelig Receptor Gene Family AT3G14350 54.7 2.5e-160 562.8
Cec01g0983 . 201 711 Strubbelig Receptor Gene Family AT4G22130 68.3 1.4e-177 619.8
Cec07g1541 . 492 820 Strubbelig Receptor Gene Family AT4G22130 63.4 8.0e-120 427.9
Cec09g0147 . 465 781 Strubbelig Receptor Gene Family AT4G22130 63.6 6.3e-117 418.3
Cec02g0135 . 516 827 Strubbelig Receptor Gene Family AT4G22130 58.8 7.8e-107 384.8
Cec08g0512 . 357 704 Strubbelig Receptor Gene Family AT4G22130 52.1 7.8e-99 358.2
Cec04g1985 . 464 752 Strubbelig Receptor Gene Family AT4G22130 59.5 3.9e-98 355.9
Cec10g1755 . 459 781 Strubbelig Receptor Gene Family AT4G22130 52.3 1.4e-92 337.4
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003013 1 3 1 1 1 1 2 1 1 2 1 0 3 2 1 2 1 1 3 1 2 2 2 1 2 2 2 1 0 1 44
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72334 PF00069 Pkinase 4.90E-34 CL0016 Cec PK