Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g1769 ATGTTTTCGTGGCTGGCAAGGATGGCGTCGGCTTGTTGGAAACCAGTGAGGCGGTATGCCCGTATGAACAAGGATGATGATGAAGATTGTTCTTTAGAGGACTCTTTGTTGTGGAGCAGAGAGCTTGAAAAGCACTCTTATGGGGAATTTTCTTTTGCTGTGGTTCAGGCTAATGAGGTAATTGAGGATAATAGTCAGGTTGAGACTGGCCCAGATGCCACTTTCGTCGGCGTTTATGATGGCCATGGTGGCCCTGATGCTTCTCGCTTTATCTGTGATCATCTTTTCAGGAATCTAATGAGGCTTGCTCAAGAGAATGGAAATATAACTGAAGATATCCTTCGAAGTGCATTTTCTGCAACTGAGGAAGGGTTTCTTACTCTTGTTCGTCGGTCATGGGGAATAAAGCCAACAATTGCAGCTATGGGATCTTGTTGCCTGGTGGGAGTTATCTGGAGAGGTACATTATACGTCGGTAACGTCGGTGATTCCCGGGCTGTTATTGGTTCTTTAGGTAAATCTAATAAGATAGTTGCAGAACAGTTGACAAGGGATCATAATGCAAGTATCGAGGAGGTTAGACAAGAACTCAGGTCCTTACATCCTGATGACTCACATATCGTTGTTATGAAGCACGGAGTCTGGCGTATTAAAGGCATTATTCAGGTTTCCAGATCAATAGGTGATGCATATTTAAAAAAGCCAGAGTTTTCTCTTGATCCATCCTTTCCACGATTCCACCTTGCGGAGCCTCTTCGACGGCCTGTTCTTACTGCGGAACCATCGTTAAGTACAAGAGTTCTACAACCTAATGACAAATTTCTCATATTTGCATCTGATGGCCTATGGGAGCATCTAACGAATCAACAAGCTGTCGAGATTGTGTATAATAACCCAAGAGCAGGAATTGCAAAAAGACTTGTTAAAACAGCGCTAACTGAGGCTGCAAGGAAGAGAGAAATGAGATATGATGATCTGAAGAAGCTCGAAAAGGGCATACGACGGTTTTTTCATGATGATATCACAGTTGTTGTCATCTTTCTGGACTATGAGTTGCAAGGGAAGAAGGCACGTGTGCCAGAATTATCTGTTCGTGGGTTTACTGATACCGTTGGACCGTCAAATTTCAATGTTCTTCGAGGCATTGATGAGAATGGAAGGTCTGTTGGGTGA 1173 43.56 MFSWLARMASACWKPVRRYARMNKDDDEDCSLEDSLLWSRELEKHSYGEFSFAVVQANEVIEDNSQVETGPDATFVGVYDGHGGPDASRFICDHLFRNLMRLAQENGNITEDILRSAFSATEEGFLTLVRRSWGIKPTIAAMGSCCLVGVIWRGTLYVGNVGDSRAVIGSLGKSNKIVAEQLTRDHNASIEEVRQELRSLHPDDSHIVVMKHGVWRIKGIIQVSRSIGDAYLKKPEFSLDPSFPRFHLAEPLRRPVLTAEPSLSTRVLQPNDKFLIFASDGLWEHLTNQQAVEIVYNNPRAGIAKRLVKTALTEAARKREMRYDDLKKLEKGIRRFFHDDITVVVIFLDYELQGKKARVPELSVRGFTDTVGPSNFNVLRGIDENGRSVG 390
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 32415335 32418198 + CePI673135_10g017690.1 Cec10g1769 214684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g1769 390 FunFam Probable protein phosphatase 2C 42 40 356 - -
Cec10g1769 390 PANTHER PROTEIN PHOSPHATASE 40 347 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cec10g1769 390 ProSitePatterns PPM-type phosphatase domain signature. 75 83 IPR000222 GO:0043169(InterPro)
Cec10g1769 390 SUPERFAMILY PP2C-like 53 349 IPR036457 -
Cec10g1769 390 Gene3D - 27 358 IPR036457 -
Cec10g1769 390 SMART PP2C_4 43 346 IPR001932 -
Cec10g1769 390 Pfam Protein phosphatase 2C 69 317 IPR001932 -
Cec10g1769 390 CDD PP2Cc 47 348 IPR001932 -
Cec10g1769 390 ProSiteProfiles PPM-type phosphatase domain profile. 49 348 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0716 Cec-Chr2:7509883 Cec10g1769 Cec-Chr10:32415335 3.30E-117 dispersed
Cec10g1769 Cec-Chr10:32415335 Cec10g2077 Cec-Chr10:35483190 8.30E-116 dispersed
Cec10g1769 Cec-Chr10:32415335 Cec02g1269 Cec-Chr2:29348677 1.70E-116 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g1769 K01102 - csv:101222146 763.837