Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec10g1770 | ATGCGGTGGAGTTCGTCTCGGAATCAAGAAACCGAATCTCTTTCCCTGGTCAACGAGAGGAGAGGATCGTCCGATGTGAAGGGCATAACGGTCCAGGAGAGGGCGATGACCGAAAAGTTAGACAGCTGGATCCAACGAGAATGTGACGCACTCAGTCCATTGCTATTGCTATTGCCATTGCCACCACCTCGACAGTTTCAAGAACACGAAGCTTTCTTGATTTCTAAGCTCAGAAATCATGATCGAGCAAACATTTTGCGACAATTCACAATGGCAGATTCCGAGGATATTCAGCCTCTCGTTTGTGATAATGGAACAGGGATGGTCAAGGCTGGATTTGCTGGAGACGATGCTCCAAGGGCTGTATTCCCTAGCATCGTTGGTCGCCCCAGACACACCGGTGTTATGGTTGGTATGGGCCAAAAGGATGCCTATGTTGGTGATGAAGCTCAATCGAAGAGAGGGATTTTGACTTTAAAATATCCCATTGAGCATGGTATCGTTAGCAATTGGGATGATATGGAGAAAATTTGGCATCACACTTTCTACAACGAGCTTCGAGTTGCTCCAGAAGAGCATCCAGTTCTGCTCACCGAAGCACCCTTGAATCCCAAGGCGAATAGAGAGAAAATGACCCAAATTATGTTTGAGACTTTCAACACCCCCGCTATGTATGTTGCTATCCAGGCCGTCCTTTCCCTTTATGCCAGTGGTCGCACAACCGGGATCGTTTTGGATTCTGGTGATGGTGTCAGCCACACAGTTCCAATCTACGAAGGGTATGCTCTCCCACATGCCATCCTTCGTCTAGACCTGGCTGGCCGTGATCTCACAGATGCTCTAATGAAAATCTTGACTGAACGTGGTTACTCTTTCACCACCACCGCCGAGCGTGAAATTGTGAGAGATATGAAGGAGAAACTAGCTTACATAGCCCTGGACTACGAGCAAGAGCTAGAGACATCAAAAACCAGCTCTTCAGTGGAGAAGAGCTATGAACTACCAGATGGACAGGTGATCACCATTGGTGCTGAAAGATTCCGATGCCCTGAAGTCTTGTTCCAGCCATCCATGATAGGAATGGAAGCAGCTGGTATTCATGAAACCACATACAATTCAATCATGAAGTGTGATGTCGATATTAGAAAGGATCTCTATGGAAACATTGTCCTCAGTGGTGGTTCCACTATGTTCCCTGGCATTGCTGACAGGATGAGCAAGGAGATCACTGCATTGGCTCCTAGTAGCATGAAGATCAAAGTGGTAGCACCACCTGAAAGAAAGTACAGTGTCTGGATTGGAGGCTCCATTTTAGCTTCCCTCAGCACTTTCCAACAGATGTGGATTGCTAAGGCAGAATATGATGAATCTGGGCCATCAATTGTCCACAGGAAATGCTTCTGA | 1404 | 47.01 | MRWSSSRNQETESLSLVNERRGSSDVKGITVQERAMTEKLDSWIQRECDALSPLLLLLPLPPPRQFQEHEAFLISKLRNHDRANILRQFTMADSEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETSKTSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF | 467 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 32419855 | 32424775 | - | CePI673135_10g017700.1 | Cec10g1770 | 214685 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec10g1770 | 467 | SMART | actin_3 | 97 | 467 | IPR004000 | - | |
Cec10g1770 | 467 | Gene3D | - | 230 | 430 | - | - | |
Cec10g1770 | 467 | SUPERFAMILY | Actin-like ATPase domain | 239 | 467 | IPR043129 | - | |
Cec10g1770 | 467 | PRINTS | Actin signature | 118 | 127 | IPR004000 | - | |
Cec10g1770 | 467 | PRINTS | Actin signature | 141 | 152 | IPR004000 | - | |
Cec10g1770 | 467 | PRINTS | Actin signature | 207 | 220 | IPR004000 | - | |
Cec10g1770 | 467 | PRINTS | Actin signature | 232 | 251 | IPR004000 | - | |
Cec10g1770 | 467 | PRINTS | Actin signature | 328 | 344 | IPR004000 | - | |
Cec10g1770 | 467 | PRINTS | Actin signature | 153 | 175 | IPR004000 | - | |
Cec10g1770 | 467 | Gene3D | Actin; Chain A, domain 4 | 272 | 363 | - | - | |
Cec10g1770 | 467 | CDD | NBD_sugar-kinase_HSP70_actin | 100 | 273 | - | - | |
Cec10g1770 | 467 | PANTHER | ACTIN | 98 | 459 | IPR004000 | GO:0005737(PANTHER) | |
Cec10g1770 | 467 | FunFam | Actin, muscle | 272 | 363 | - | - | |
Cec10g1770 | 467 | Gene3D | - | 100 | 461 | - | - | |
Cec10g1770 | 467 | ProSitePatterns | Actins signature 1. | 145 | 155 | IPR004001 | - | |
Cec10g1770 | 467 | SUPERFAMILY | Actin-like ATPase domain | 96 | 245 | IPR043129 | - | |
Cec10g1770 | 467 | FunFam | Actin, alpha skeletal muscle | 93 | 256 | - | - | |
Cec10g1770 | 467 | FunFam | Major actin | 350 | 430 | - | - | |
Cec10g1770 | 467 | Pfam | Actin | 95 | 467 | IPR004000 | - | |
Cec10g1770 | 467 | ProSitePatterns | Actins and actin-related proteins signature. | 196 | 208 | IPR020902 | - | |
Cec10g1770 | 467 | FunFam | Putative actin-related protein 5 | 431 | 459 | - | - | |
Cec10g1770 | 467 | ProSitePatterns | Actins signature 2. | 448 | 456 | IPR004001 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec02g0074 | Cec-Chr2:706262 | Cec10g1770 | Cec-Chr10:32419855 | 6.70E-205 | dispersed | |
Cec04g0957 | Cec-Chr4:29257562 | Cec10g1770 | Cec-Chr10:32419855 | 8.50E-208 | dispersed | |
Cec04g1250 | Cec-Chr4:32084613 | Cec10g1770 | Cec-Chr10:32419855 | 4.50E-202 | dispersed | |
Cec07g0364 | Cec-Chr7:3589718 | Cec10g1770 | Cec-Chr10:32419855 | 9.50E-218 | dispersed | |
Cec09g1439 | Cec-Chr9:21203217 | Cec10g1770 | Cec-Chr10:32419855 | 1.00E-211 | dispersed | |
Cec09g2081 | Cec-Chr9:37827119 | Cec10g1770 | Cec-Chr10:32419855 | 4.00E-216 | dispersed | |
Cec10g1770 | Cec-Chr10:32419855 | Cec11g0747 | Cec-Chr11:8506068 | 8.20E-94 | dispersed | |
Cec10g1770 | Cec-Chr10:32419855 | Cec02g2127 | Cec-Chr2:38824229 | 3.40E-217 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec10g1770 | K10355 | - | mdm:103443130 | 750.74 |