Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g1777 ATGGAGTTGGGTTTGAGCCTTGGAGATCATCCTCCTTCCAATTCCAATAAACCATTTGGGTTTCTCTCTAAACCGCTTTCTTCTTCTTCTTCTTCATCTCTCATGGCTTTGGGATTTTGTGTTGGTTTAATTGGACATCATTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCCGCTTCCCTTCAAGATGAGGAAGAAGAAGATGAAGATGATGATAATGATCAGAAAACGGTTATTCTCGGTTCAGCTTCCGGTTCGGATCCACCGGTTCAGCTCGATCTTCTTCCTTTGGCTCCTGTTCCTCGTTCTTCTTCTTCCTCCCTTCCTTTTCCATGGCTTTCTCATCACTTGATGGCGGAAGTGGGTAGTTCAGAGGGAGGAGAAAGGGTAGAGTTGGATGTGAACCGGGCGGCGGAGACAGAAGACAGTAGGGTGTCGTGTTTCCAAATGGAATTTGGGGCGAGAAATGGCGGCGGAGGAGGAGGAATTAAAAGGAAGAGATCATGGGAAATGGAAATGGAAACAGAAAGAGGAGGTTGTTCAAGAATGAGTGATGATGATCAAGATCATAATGCCTCTGCTGCTGCTCCTAAAAAGCTTCGACTTTCAAAACAACAATCTGCCTTTCTTGAAGAAAGCTTCAAAGAACATACCACCCTCAATCCTAAGCAGAAGCTAGCACTAGCCAAGCAGCTAAACCTCCAACCTAGGCAAGTGGAAGTATGGTTTCAAAACAGAAGAGCAAGGACAAAGTTGAAGCAGACAGAAGTAGATTGTGAGTATTTAAGGAGATGTTGTGAGACATTGACAGAAGAGAACAGAAGATTACAAAAAGAACTTCAAGAATTAAGAGCTTTAAAAACTTCTCAGCCCTTTTATATGCAACTTCCAGCCACCACCCTCACCATGTGCCCCTCGTGCGAGCGTGTCGCCGCCGCCACCACCACCACTCCCAACGCCTCCGTTCCCACCAAAACCGCCACCCCCGCCCCGTCGTCCGCTCTTTGCCTCGCCAATAAACCGAAGATCTTGCCATTTCCTCATTTGCATCAGGCTGCTTCATGA 1071 46.78 MELGLSLGDHPPSNSNKPFGFLSKPLSSSSSSSLMALGFCVGLIGHHSASASASASASASASLQDEEEEDEDDDNDQKTVILGSASGSDPPVQLDLLPLAPVPRSSSSSLPFPWLSHHLMAEVGSSEGGERVELDVNRAAETEDSRVSCFQMEFGARNGGGGGGIKRKRSWEMEMETERGGCSRMSDDDQDHNASAAAPKKLRLSKQQSAFLEESFKEHTTLNPKQKLALAKQLNLQPRQVEVWFQNRRARTKLKQTEVDCEYLRRCCETLTEENRRLQKELQELRALKTSQPFYMQLPATTLTMCPSCERVAAATTTTPNASVPTKTATPAPSSALCLANKPKILPFPHLHQAAS 356
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 32503119 32505166 + CePI673135_10g017770.1 Cec10g1777 214692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g1777 356 CDD homeodomain 200 256 IPR001356 GO:0003677(InterPro)
Cec10g1777 356 CDD bZIP 248 287 - -
Cec10g1777 356 SMART halz 255 298 IPR003106 GO:0006355(InterPro)|GO:0043565(InterPro)
Cec10g1777 356 MobiDBLite consensus disorder prediction 1 31 - -
Cec10g1777 356 MobiDBLite consensus disorder prediction 54 99 - -
Cec10g1777 356 MobiDBLite consensus disorder prediction 180 196 - -
Cec10g1777 356 ProSiteProfiles 'Homeobox' domain profile. 195 255 IPR001356 GO:0003677(InterPro)
Cec10g1777 356 Gene3D - 203 253 - -
Cec10g1777 356 ProSitePatterns 'Homeobox' domain signature. 230 253 IPR017970 GO:0000981(InterPro)|GO:0006355(InterPro)
Cec10g1777 356 Coils Coil 261 291 - -
Cec10g1777 356 Pfam Homeodomain 201 253 IPR001356 GO:0003677(InterPro)
Cec10g1777 356 MobiDBLite consensus disorder prediction 9 31 - -
Cec10g1777 356 MobiDBLite consensus disorder prediction 180 202 - -
Cec10g1777 356 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 67 327 IPR050762 -
Cec10g1777 356 FunFam Homeobox-leucine zipper protein HAT22 203 249 - -
Cec10g1777 356 Pfam Homeobox associated leucine zipper 255 289 IPR003106 GO:0006355(InterPro)|GO:0043565(InterPro)
Cec10g1777 356 SUPERFAMILY Homeodomain-like 192 256 IPR009057 -
Cec10g1777 356 SMART HOX_1 197 259 IPR001356 GO:0003677(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec10g0249 Cec-Chr10:2766106 Cec10g1777 Cec-Chr10:32503119 3.30E-50 dispersed
Cec10g0842 Cec-Chr10:16896854 Cec10g1777 Cec-Chr10:32503119 2.50E-50 dispersed
Cec10g1276 Cec-Chr10:26893655 Cec10g1777 Cec-Chr10:32503119 7.80E-44 dispersed
Cec10g1777 Cec-Chr10:32503119 Cec10g1968 Cec-Chr10:34472096 1.40E-13 dispersed
Cec10g1777 Cec-Chr10:32503119 Cec09g0378 Cec-Chr9:3241315 9.40E-66 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30427 PF00046 Homeodomain 2.40E-15 CL0123 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g1777 K09338 - csv:101222778 477.248