Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g1831 ATGAACACCTCCACTGACTCTGATGGCGGAGACGGCGGCAGCGTCGGAAGTTTCCCCTACGTCGTCGGAATTTCAGTCGGAATCCTCTTCCTCCTCACAACCCTTACAATCGCGACCTATTTCTGCACCAGAACCACCGTTCCGTCGCCGAATCGCCGTCTCCGGCCGGCGGAACAGCGGGATTTCGTCGTCGAGTTTGGACCGGGGCTTGAAGATGAGGTCATTAATGGGTATCCGAAGATTCTGTACTCGGAGGTGAAATTGGAGGGAAAATTGGAGTCCGCCGCCGCGAGTGGTTGTTCGATATGTTTGGGGGATTATAAAAACGACGACGTTTTGCGGTTGTTGCCGGATTGTGGCCATTTGTTTCACAGCGGTTGTATTGATCCGTGGTTGCGGATGAACCCTAGCTGCCCTGTTTGCAGAACTTCGCCGGTGCCGACGCCGATTTCAACCCCTTTGGCGGAGACGGTTCCGTTGGCCATCGGAAGAAGTTGA 498 54.82 MNTSTDSDGGDGGSVGSFPYVVGISVGILFLLTTLTIATYFCTRTTVPSPNRRLRPAEQRDFVVEFGPGLEDEVINGYPKILYSEVKLEGKLESAAASGCSICLGDYKNDDVLRLLPDCGHLFHSGCIDPWLRMNPSCPVCRTSPVPTPISTPLAETVPLAIGRS 165
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 33120336 33120833 - CePI673135_10g018310.1 Cec10g1831 214746
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cec10g1831 165 SMART ring_2 100 141 IPR001841 -
Cec10g1831 165 Pfam Ring finger domain 100 142 IPR001841 -
Cec10g1831 165 CDD RING-H2_PA-TM-RING 100 142 - -
Cec10g1831 165 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 12 159 IPR045899 -
Cec10g1831 165 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 62 147 IPR013083 -
Cec10g1831 165 ProSiteProfiles Zinc finger RING-type profile. 100 142 IPR001841 -
Cec10g1831 165 SUPERFAMILY RING/U-box 74 147 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g0147 Cec-Chr5:1233270 Cec10g1831 Cec-Chr10:33120336 1.20E-24 dispersed
Cec08g0844 Cec-Chr8:20247967 Cec10g1831 Cec-Chr10:33120336 4.60E-15 dispersed
Cec08g1098 Cec-Chr8:22811002 Cec10g1831 Cec-Chr10:33120336 1.40E-25 dispersed
Cec10g1676 Cec-Chr10:31267463 Cec10g1831 Cec-Chr10:33120336 8.60E-08 dispersed
Cec10g1831 Cec-Chr10:33120336 Cec11g0702 Cec-Chr11:7759792 3.20E-08 dispersed
Cec10g1831 Cec-Chr10:33120336 Cec04g1194 Cec-Chr4:31512533 1.00E-46 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g1831 - - - 0.0