Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec10g1844 | ATGGAAGATGAAATCGAAATCCCCCATTATTTCCTCTGCCCCATCTCCCTCCAAATCATGAAAGACCCTGTAACTCTCCCCTCCGGCATAACCTACGACCGCCACTCCATTGAAACTTGGCTCTTCTCCAACAAAAACTCCTCCTGCCCCGTCACCAAACTCCCCATCTCCGACTCCGATTCCGATCTCCTCACCCCTAACCACACCCTCCGCCGTCTAATCCAAGCTTGGTGTACTTTAAACTCCTCCCATGGCGTCGAACGCTTCCCCACTCCCAAACCCCCCATCCATAAATCCCAAATCCTTCACCTCATTTCCTCTGCCAATACTTCCCCTTCTTCCTTAATCTCCTCCATTCGCCGTCTCCGCTCCATATCCGCCGAGTCTGAAACTAATCGACGTTGTGTTGAATCCGCCGGAGCGCCAGAGTTTTTAGCCTCTGTTATTGTCGGCACCGACTCCTCTGCCTCTCATGAAGCTGTCTCTACTCTCCATTATCTCCGTCTCTCCGATTCAACATTCAAATCCTTGGCTACCCATTCCGAGTTTCTCGATTCTTTGACGCATTTCATGAAATTACAAGGTACCCATGAATCGTCGAGAGCTTATGCGGTGTTGATTTTGAAATCGATCTTCGAAGTCGCTGACCCACTTCAACTAAGTTTCTTGAAATCCGATTTGTTTGTGCGGATTGTTGAGATTTTGAAGGATCGATCATCGTCTCAGCAAATTCTCAAGGCGGCATTGGGGATTTTGATTGCGGCGTGTCCATGGGGGAGGAACAGAGTGAAGGCAGTGGAGGCAGGTGGGGTTGGGGTTTTGGTTGAGATTTTACTAGCGACGCCGGAAAGGAGGGTATGTGAGATGACGTTGACGGCGATGGATTTACTCTGTGGGTGTGCAGATGGCAGGGCGGCGCTGCTGGCACACGGCGGAGGTATGGCCGTTGTTTCGAAGAAGATACTGAGAGTGTCGCAAGTGGGGAGTGAAAAGGCGGTGAGGGTTCTGTATTGGGTGGCGAAATTCTCGGGAAGTCCGGCGGTTTTGATGGAAATGGCGCAATTAGGGATTGTGGCGAAGCTTTGTTTGGTTCTGCAAATTGAAAGTGGAAGCAAGATGAAGGAGAAAGCTAGAGAGATTTTGAAAATGCATGCTCGTGTTTGGAAGAATTCGCCGTGTATTCCTTCTAAATTGGCTACTTCATATCCTCCAAATTAA | 1218 | 49.43 | MEDEIEIPHYFLCPISLQIMKDPVTLPSGITYDRHSIETWLFSNKNSSCPVTKLPISDSDSDLLTPNHTLRRLIQAWCTLNSSHGVERFPTPKPPIHKSQILHLISSANTSPSSLISSIRRLRSISAESETNRRCVESAGAPEFLASVIVGTDSSASHEAVSTLHYLRLSDSTFKSLATHSEFLDSLTHFMKLQGTHESSRAYAVLILKSIFEVADPLQLSFLKSDLFVRIVEILKDRSSSQQILKAALGILIAACPWGRNRVKAVEAGGVGVLVEILLATPERRVCEMTLTAMDLLCGCADGRAALLAHGGGMAVVSKKILRVSQVGSEKAVRVLYWVAKFSGSPAVLMEMAQLGIVAKLCLVLQIESGSKMKEKAREILKMHARVWKNSPCIPSKLATSYPPN | 405 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 33283467 | 33284684 | - | CePI673135_10g018440.1 | Cec10g1844 | 214759 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec10g1844 | 405 | Gene3D | - | 96 | 389 | IPR011989 | - | |
Cec10g1844 | 405 | SUPERFAMILY | ARM repeat | 101 | 371 | IPR016024 | - | |
Cec10g1844 | 405 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 1 | 88 | IPR013083 | - | |
Cec10g1844 | 405 | SMART | Ubox_2 | 10 | 77 | IPR003613 | GO:0004842(InterPro)|GO:0016567(InterPro) | |
Cec10g1844 | 405 | Pfam | U-box domain | 7 | 81 | IPR003613 | GO:0004842(InterPro)|GO:0016567(InterPro) | |
Cec10g1844 | 405 | PANTHER | WDSAM1 PROTEIN | 3 | 398 | IPR045185 | GO:0061630(InterPro) | |
Cec10g1844 | 405 | SUPERFAMILY | RING/U-box | 4 | 85 | - | - | |
Cec10g1844 | 405 | ProSiteProfiles | U-box domain profile. | 6 | 84 | IPR003613 | GO:0004842(InterPro)|GO:0016567(InterPro) | |
Cec10g1844 | 405 | FunFam | RING-type E3 ubiquitin transferase | 1 | 87 | - | - | |
Cec10g1844 | 405 | CDD | RING-Ubox_PUB | 8 | 60 | IPR045210 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec03g1272 | Cec-Chr3:28282672 | Cec10g1844 | Cec-Chr10:33283467 | 2.20E-74 | dispersed | |
Cec03g1280 | Cec-Chr3:28540002 | Cec10g1844 | Cec-Chr10:33283467 | 8.70E-76 | dispersed | |
Cec05g0305 | Cec-Chr5:2486846 | Cec10g1844 | Cec-Chr10:33283467 | 5.20E-52 | dispersed | |
Cec06g0072 | Cec-Chr6:698157 | Cec10g1844 | Cec-Chr10:33283467 | 4.70E-38 | dispersed | |
Cec07g0254 | Cec-Chr7:2492177 | Cec10g1844 | Cec-Chr10:33283467 | 2.30E-06 | dispersed | |
Cec10g1844 | Cec-Chr10:33283467 | Cec11g1438 | Cec-Chr11:28553272 | 5.70E-11 | dispersed | |
Cec04g0725 | Cec-Chr4:26416301 | Cec10g1844 | Cec-Chr10:33283467 | 9.90E-115 | transposed | |
Cec05g1187 | Cec-Chr5:10861431 | Cec10g1844 | Cec-Chr10:33283467 | 2.30E-50 | transposed | |
Cec05g1298 | Cec-Chr5:12990005 | Cec10g1844 | Cec-Chr10:33283467 | 3.80E-48 | transposed | |
Cec07g0613 | Cec-Chr7:8245350 | Cec10g1844 | Cec-Chr10:33283467 | 6.10E-46 | transposed | |
Cec10g1844 | Cec-Chr10:33283467 | Cec02g2358 | Cec-Chr2:40813868 | 2.00E-96 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec10g1844 | - | - | - | 0.0 |