Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g1845 ATGGCGACTTACCTTCATGGAAATTCTGATCAATTCCAATCTTCTGATGGTGGCCTTCAAACCCTTGTCTTAATGAATCCAAGCTATGTTCAATTCTCCGACACGCCGCCGCCGCCGCCTCCGTCCCACCCTAATCTCGTCTTCTTCAATTCTCCTTCTACGGCTGCTAATTCCTATACTACACTCACACAAGCGCCCCCGTCTTCTCACACTCAACAATTCGTTGGAATTCCGTTGCAGACGACTGCCGCTTCCCCGACGTCACAAGACCATAATTCGCATCCTTTGAATCCCCACCATGATATCTCTGCCTTGCACGGCTTTGCTCCACGCCTTCACCATAACATTTGGAACCAAATTGACCCATCCACGGCCGCGCGTGAGTCTGCACGTGCTCAGCAGGGCTTGTCCTTGAGCCTTTCTTCGCAGCACCAGCAAGGTTTTGGGTCGAGAGATGTTCAATCTCAGACCCAACAGGCAGCGTCTGGCGAGGAGAACATGCGGATCTCCGGTGGATCGAGTTCTTCGGCTTCTGGTGTCACTAACGGCGTTGCTGGAATTCAGGGCGTTTTAATTAGCTCCAAATATCTTAAGGCTGCGCAAGAACTTCTAGATGAGGTTGTTAATGTCACCCAAAACGGAATTAAAAGTGAATCATCTCCAAAGAAGGCCACCGGAAATCAATCGAAGATGATCGGAGATGCTCCCGCTGCCACCGGAACTGCAGACGGTTCTTTAGAAGGAGAAACCGACGGTAAACGGGCCGCGGAGCTTACAACCGCCGAGAGACAAGAAATTCAGATGAAGAAAGCAAAGCTTATAAGCATGCTTGACGAGGTGGAGCAAAGGTACAGACAGTACCACCACCAGATGCAGATAGTGATATCCTCATTCGAGCAGGCGGCCGGAGCCGGTTCGGCGAGAACCTACACCGCCCTTGCACTTCAGACGATTTCGAAGCAATTCCGTTGCTTAAAAGACGCAATCACCGGCCAAATCCGAGCGGCGAACAAGAGTTTGGGGGAAGAAGAATGTATCGGAAGAAAAATGGAAGGTTCCCGGTTGAAATTCGTCGATAACCATCTCCGGCAACAACGAGCTCTGCAACAATTGGGCATGATACAACACAATGCTTGGAGACCTCAGAGAGGCTTACCGGAGAGATCGGTATCGATTCTTCGGGCTTGGCTTTTCGAACACTTCCTCCATCCTTACCCTAAGGATTCAGATAAACACATGCTCGCTAAGCAAACAGGGCTCACCAGAAGCCAGGTTTCGAATTGGTTTATAAACGCGAGAGTTCGACTGTGGAAGCCAATGGTGGAAGAGATGTACATGGAGGAAATCAAAGAGCAAGAACAGAACGGCAGCGGATCGACACCGGCGACGGAAAAAAGCAACGACGATTCAGTTTCGAAATCCATAGCTCCACCACCAGAGACAAAAAGCCCCAATTCAAAACCAGAGGAAAAAAGCCCAAATCCAAACCAAAACGTGCATCCTTCGATCTCAATCTCAAATTCCTCCGGCGGAAATGTTCGAAACCCATCTGGATTTACACTCATCGGAGCCTCATCGGAGCTCGAAGGAATCACACAAGGAAGCCCTAAAAAACAGAGAGGCCCAGAAATCCTTCATTCCTCAAACAACAACGTCCCTTTCATAAACATGGACATCAAACCCCGAGAAGAAGAAGAACATCAAAATCACAATCACAATCACAATCCCCATCATAATCATCATCTTCCAATGAAATTCGACGACGAGAGACAAAACAGAGATGGGTATTCATTTCTAGGCCAACCCCATTTCAACATCGGCGGATTCGGCCAATACCCAATCGGCGAAATCGCCAGATTCGACGCCGATCAGTTTACTCCAAGATTCTCCGGCAACAATGGTGTCTCTTTGACTTTAGGCCTTCCCCATTGTGAAAATCTCTCGTTAAACGCAGCTACCCACCAAAGCTTTCTCCCAAACCAGAGCATCCATTTAGGAAGAAGAACAGAAATTGGAAAACCCACTGATTTTTCCGCCATTAACGCCTCTACAGCTCATTCTTCCACTGCTTTTGAGACCATCAACATCCAAAATGGAAAAAGGTTCGCTGCTCAATTACTGCCAGACTTTGTGGCCTAA 2139 48.39 MATYLHGNSDQFQSSDGGLQTLVLMNPSYVQFSDTPPPPPPSHPNLVFFNSPSTAANSYTTLTQAPPSSHTQQFVGIPLQTTAASPTSQDHNSHPLNPHHDISALHGFAPRLHHNIWNQIDPSTAARESARAQQGLSLSLSSQHQQGFGSRDVQSQTQQAASGEENMRISGGSSSSASGVTNGVAGIQGVLISSKYLKAAQELLDEVVNVTQNGIKSESSPKKATGNQSKMIGDAPAATGTADGSLEGETDGKRAAELTTAERQEIQMKKAKLISMLDEVEQRYRQYHHQMQIVISSFEQAAGAGSARTYTALALQTISKQFRCLKDAITGQIRAANKSLGEEECIGRKMEGSRLKFVDNHLRQQRALQQLGMIQHNAWRPQRGLPERSVSILRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYMEEIKEQEQNGSGSTPATEKSNDDSVSKSIAPPPETKSPNSKPEEKSPNPNQNVHPSISISNSSGGNVRNPSGFTLIGASSELEGITQGSPKKQRGPEILHSSNNNVPFINMDIKPREEEEHQNHNHNHNPHHNHHLPMKFDDERQNRDGYSFLGQPHFNIGGFGQYPIGEIARFDADQFTPRFSGNNGVSLTLGLPHCENLSLNAATHQSFLPNQSIHLGRRTEIGKPTDFSAINASTAHSSTAFETINIQNGKRFAAQLLPDFVA 712
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 33299423 33301848 - CePI673135_10g018450.1 Cec10g1845 214760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g1845 712 Coils Coil 263 283 - -
Cec10g1845 712 SUPERFAMILY Homeodomain-like 380 446 IPR009057 -
Cec10g1845 712 MobiDBLite consensus disorder prediction 558 572 - -
Cec10g1845 712 MobiDBLite consensus disorder prediction 214 251 - -
Cec10g1845 712 Pfam Homeobox KN domain 396 435 IPR008422 GO:0003677(InterPro)|GO:0006355(InterPro)
Cec10g1845 712 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 178 476 IPR050224 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0006357(PANTHER)
Cec10g1845 712 ProSiteProfiles 'Homeobox' domain profile. 376 439 IPR001356 GO:0003677(InterPro)
Cec10g1845 712 MobiDBLite consensus disorder prediction 452 480 - -
Cec10g1845 712 FunFam BEL1-like homeodomain protein 9 382 444 - -
Cec10g1845 712 MobiDBLite consensus disorder prediction 450 593 - -
Cec10g1845 712 MobiDBLite consensus disorder prediction 124 179 - -
Cec10g1845 712 CDD homeodomain 379 440 IPR001356 GO:0003677(InterPro)
Cec10g1845 712 SMART prehox3 185 331 IPR006563 -
Cec10g1845 712 SMART HOX_1 379 443 IPR001356 GO:0003677(InterPro)
Cec10g1845 712 MobiDBLite consensus disorder prediction 488 533 - -
Cec10g1845 712 Gene3D - 374 453 - -
Cec10g1845 712 Pfam Associated with HOX 191 330 IPR006563 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec10g1845 Cec-Chr10:33299423 Cec10g2156 Cec-Chr10:36069655 9.30E-49 dispersed
Cec01g0238 Cec-Chr1:2349830 Cec10g1845 Cec-Chr10:33299423 8.30E-67 transposed
Cec02g1362 Cec-Chr2:30712336 Cec10g1845 Cec-Chr10:33299423 1.10E-67 transposed
Cec04g1314 Cec-Chr4:32760880 Cec10g1845 Cec-Chr10:33299423 2.30E-68 transposed
Cec08g1758 Cec-Chr8:28693340 Cec10g1845 Cec-Chr10:33299423 2.60E-42 transposed
Cec09g0274 Cec-Chr9:2382466 Cec10g1845 Cec-Chr10:33299423 2.10E-66 transposed
Cec11g0426 Cec-Chr11:4464511 Cec10g1845 Cec-Chr10:33299423 1.30E-84 transposed
Cec10g1845 Cec-Chr10:33299423 Cec02g2357 Cec-Chr2:40804767 2.90E-135 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30434 PF07526 POX 8.60E-50 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g1845 - - - 0.0