Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec10g1845 | ATGGCGACTTACCTTCATGGAAATTCTGATCAATTCCAATCTTCTGATGGTGGCCTTCAAACCCTTGTCTTAATGAATCCAAGCTATGTTCAATTCTCCGACACGCCGCCGCCGCCGCCTCCGTCCCACCCTAATCTCGTCTTCTTCAATTCTCCTTCTACGGCTGCTAATTCCTATACTACACTCACACAAGCGCCCCCGTCTTCTCACACTCAACAATTCGTTGGAATTCCGTTGCAGACGACTGCCGCTTCCCCGACGTCACAAGACCATAATTCGCATCCTTTGAATCCCCACCATGATATCTCTGCCTTGCACGGCTTTGCTCCACGCCTTCACCATAACATTTGGAACCAAATTGACCCATCCACGGCCGCGCGTGAGTCTGCACGTGCTCAGCAGGGCTTGTCCTTGAGCCTTTCTTCGCAGCACCAGCAAGGTTTTGGGTCGAGAGATGTTCAATCTCAGACCCAACAGGCAGCGTCTGGCGAGGAGAACATGCGGATCTCCGGTGGATCGAGTTCTTCGGCTTCTGGTGTCACTAACGGCGTTGCTGGAATTCAGGGCGTTTTAATTAGCTCCAAATATCTTAAGGCTGCGCAAGAACTTCTAGATGAGGTTGTTAATGTCACCCAAAACGGAATTAAAAGTGAATCATCTCCAAAGAAGGCCACCGGAAATCAATCGAAGATGATCGGAGATGCTCCCGCTGCCACCGGAACTGCAGACGGTTCTTTAGAAGGAGAAACCGACGGTAAACGGGCCGCGGAGCTTACAACCGCCGAGAGACAAGAAATTCAGATGAAGAAAGCAAAGCTTATAAGCATGCTTGACGAGGTGGAGCAAAGGTACAGACAGTACCACCACCAGATGCAGATAGTGATATCCTCATTCGAGCAGGCGGCCGGAGCCGGTTCGGCGAGAACCTACACCGCCCTTGCACTTCAGACGATTTCGAAGCAATTCCGTTGCTTAAAAGACGCAATCACCGGCCAAATCCGAGCGGCGAACAAGAGTTTGGGGGAAGAAGAATGTATCGGAAGAAAAATGGAAGGTTCCCGGTTGAAATTCGTCGATAACCATCTCCGGCAACAACGAGCTCTGCAACAATTGGGCATGATACAACACAATGCTTGGAGACCTCAGAGAGGCTTACCGGAGAGATCGGTATCGATTCTTCGGGCTTGGCTTTTCGAACACTTCCTCCATCCTTACCCTAAGGATTCAGATAAACACATGCTCGCTAAGCAAACAGGGCTCACCAGAAGCCAGGTTTCGAATTGGTTTATAAACGCGAGAGTTCGACTGTGGAAGCCAATGGTGGAAGAGATGTACATGGAGGAAATCAAAGAGCAAGAACAGAACGGCAGCGGATCGACACCGGCGACGGAAAAAAGCAACGACGATTCAGTTTCGAAATCCATAGCTCCACCACCAGAGACAAAAAGCCCCAATTCAAAACCAGAGGAAAAAAGCCCAAATCCAAACCAAAACGTGCATCCTTCGATCTCAATCTCAAATTCCTCCGGCGGAAATGTTCGAAACCCATCTGGATTTACACTCATCGGAGCCTCATCGGAGCTCGAAGGAATCACACAAGGAAGCCCTAAAAAACAGAGAGGCCCAGAAATCCTTCATTCCTCAAACAACAACGTCCCTTTCATAAACATGGACATCAAACCCCGAGAAGAAGAAGAACATCAAAATCACAATCACAATCACAATCCCCATCATAATCATCATCTTCCAATGAAATTCGACGACGAGAGACAAAACAGAGATGGGTATTCATTTCTAGGCCAACCCCATTTCAACATCGGCGGATTCGGCCAATACCCAATCGGCGAAATCGCCAGATTCGACGCCGATCAGTTTACTCCAAGATTCTCCGGCAACAATGGTGTCTCTTTGACTTTAGGCCTTCCCCATTGTGAAAATCTCTCGTTAAACGCAGCTACCCACCAAAGCTTTCTCCCAAACCAGAGCATCCATTTAGGAAGAAGAACAGAAATTGGAAAACCCACTGATTTTTCCGCCATTAACGCCTCTACAGCTCATTCTTCCACTGCTTTTGAGACCATCAACATCCAAAATGGAAAAAGGTTCGCTGCTCAATTACTGCCAGACTTTGTGGCCTAA | 2139 | 48.39 | MATYLHGNSDQFQSSDGGLQTLVLMNPSYVQFSDTPPPPPPSHPNLVFFNSPSTAANSYTTLTQAPPSSHTQQFVGIPLQTTAASPTSQDHNSHPLNPHHDISALHGFAPRLHHNIWNQIDPSTAARESARAQQGLSLSLSSQHQQGFGSRDVQSQTQQAASGEENMRISGGSSSSASGVTNGVAGIQGVLISSKYLKAAQELLDEVVNVTQNGIKSESSPKKATGNQSKMIGDAPAATGTADGSLEGETDGKRAAELTTAERQEIQMKKAKLISMLDEVEQRYRQYHHQMQIVISSFEQAAGAGSARTYTALALQTISKQFRCLKDAITGQIRAANKSLGEEECIGRKMEGSRLKFVDNHLRQQRALQQLGMIQHNAWRPQRGLPERSVSILRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYMEEIKEQEQNGSGSTPATEKSNDDSVSKSIAPPPETKSPNSKPEEKSPNPNQNVHPSISISNSSGGNVRNPSGFTLIGASSELEGITQGSPKKQRGPEILHSSNNNVPFINMDIKPREEEEHQNHNHNHNPHHNHHLPMKFDDERQNRDGYSFLGQPHFNIGGFGQYPIGEIARFDADQFTPRFSGNNGVSLTLGLPHCENLSLNAATHQSFLPNQSIHLGRRTEIGKPTDFSAINASTAHSSTAFETINIQNGKRFAAQLLPDFVA | 712 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 33299423 | 33301848 | - | CePI673135_10g018450.1 | Cec10g1845 | 214760 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec10g1845 | 712 | Coils | Coil | 263 | 283 | - | - | |
Cec10g1845 | 712 | SUPERFAMILY | Homeodomain-like | 380 | 446 | IPR009057 | - | |
Cec10g1845 | 712 | MobiDBLite | consensus disorder prediction | 558 | 572 | - | - | |
Cec10g1845 | 712 | MobiDBLite | consensus disorder prediction | 214 | 251 | - | - | |
Cec10g1845 | 712 | Pfam | Homeobox KN domain | 396 | 435 | IPR008422 | GO:0003677(InterPro)|GO:0006355(InterPro) | |
Cec10g1845 | 712 | PANTHER | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS | 178 | 476 | IPR050224 | GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0006357(PANTHER) | |
Cec10g1845 | 712 | ProSiteProfiles | 'Homeobox' domain profile. | 376 | 439 | IPR001356 | GO:0003677(InterPro) | |
Cec10g1845 | 712 | MobiDBLite | consensus disorder prediction | 452 | 480 | - | - | |
Cec10g1845 | 712 | FunFam | BEL1-like homeodomain protein 9 | 382 | 444 | - | - | |
Cec10g1845 | 712 | MobiDBLite | consensus disorder prediction | 450 | 593 | - | - | |
Cec10g1845 | 712 | MobiDBLite | consensus disorder prediction | 124 | 179 | - | - | |
Cec10g1845 | 712 | CDD | homeodomain | 379 | 440 | IPR001356 | GO:0003677(InterPro) | |
Cec10g1845 | 712 | SMART | prehox3 | 185 | 331 | IPR006563 | - | |
Cec10g1845 | 712 | SMART | HOX_1 | 379 | 443 | IPR001356 | GO:0003677(InterPro) | |
Cec10g1845 | 712 | MobiDBLite | consensus disorder prediction | 488 | 533 | - | - | |
Cec10g1845 | 712 | Gene3D | - | 374 | 453 | - | - | |
Cec10g1845 | 712 | Pfam | Associated with HOX | 191 | 330 | IPR006563 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec10g1845 | Cec-Chr10:33299423 | Cec10g2156 | Cec-Chr10:36069655 | 9.30E-49 | dispersed | |
Cec01g0238 | Cec-Chr1:2349830 | Cec10g1845 | Cec-Chr10:33299423 | 8.30E-67 | transposed | |
Cec02g1362 | Cec-Chr2:30712336 | Cec10g1845 | Cec-Chr10:33299423 | 1.10E-67 | transposed | |
Cec04g1314 | Cec-Chr4:32760880 | Cec10g1845 | Cec-Chr10:33299423 | 2.30E-68 | transposed | |
Cec08g1758 | Cec-Chr8:28693340 | Cec10g1845 | Cec-Chr10:33299423 | 2.60E-42 | transposed | |
Cec09g0274 | Cec-Chr9:2382466 | Cec10g1845 | Cec-Chr10:33299423 | 2.10E-66 | transposed | |
Cec11g0426 | Cec-Chr11:4464511 | Cec10g1845 | Cec-Chr10:33299423 | 1.30E-84 | transposed | |
Cec10g1845 | Cec-Chr10:33299423 | Cec02g2357 | Cec-Chr2:40804767 | 2.90E-135 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
30434 | PF07526 | POX | 8.60E-50 | No_clan | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec10g1845 | - | - | - | 0.0 |