Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cec10g1892 | ATGTGGGCAAGCGCCGAAGGAGGGCCGCCGGAGGTAACTCTGGAGACTTCCATGGGTTCTTTCACCGTCGAGCTTTACTTCAAACACGCACCGAGAACATGTAGAAACTTCATTGAGCTTTCCCGGCGAGGTTATTATGACAATGTCAAATTCCACCGGATTATTAAGGATTTTATAGTGCAAGGTGGAGATCCCACAGGAACTGGACGGGGTGGGGAATCTATTTATGGCAAGAAGTTTGAGGATGAAATAAAACCAGAGTTGAAGCACACTGGAGCAGGTATTCTATCAATGGCAAATGCTGGTCCTGATACAAATGGAAGCCAATTCTTTATCACTCTTGCTCCTTGCCCATCCTTAGATGGAAAGCACTCTATCTTTGGAAGAGTTTGTAGGGGAATGGAAATAATCAAAAGGCTTGGCAGTGTACAAACTGATAACAATGATAGACCCATCCATGATGTGAAAATACTACGGGCATCAGTTAAAGACTAA | 495 | 44.24 | MWASAEGGPPEVTLETSMGSFTVELYFKHAPRTCRNFIELSRRGYYDNVKFHRIIKDFIVQGGDPTGTGRGGESIYGKKFEDEIKPELKHTGAGILSMANAGPDTNGSQFFITLAPCPSLDGKHSIFGRVCRGMEIIKRLGSVQTDNNDRPIHDVKILRASVKD | 164 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 33753759 | 33757480 | + | CePI673135_10g018920.1 | Cec10g1892 | 214807 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cec10g1892 | 164 | FunFam | Peptidyl-prolyl cis-trans isomerase | 2 | 164 | - | - | |
| Cec10g1892 | 164 | SUPERFAMILY | Cyclophilin-like | 11 | 162 | IPR029000 | - | |
| Cec10g1892 | 164 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED | 9 | 159 | IPR044666 | GO:0000413(PANTHER)|GO:0003755(PANTHER)|GO:0071013(PANTHER) | |
| Cec10g1892 | 164 | PIRSF | Peptidylpro_ismrse | 3 | 164 | IPR024936 | GO:0003755(InterPro) | |
| Cec10g1892 | 164 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 25 | 40 | IPR002130 | GO:0000413(InterPro)|GO:0003755(InterPro) | |
| Cec10g1892 | 164 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 109 | 121 | IPR002130 | GO:0000413(InterPro)|GO:0003755(InterPro) | |
| Cec10g1892 | 164 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 51 | 63 | IPR002130 | GO:0000413(InterPro)|GO:0003755(InterPro) | |
| Cec10g1892 | 164 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 122 | 137 | IPR002130 | GO:0000413(InterPro)|GO:0003755(InterPro) | |
| Cec10g1892 | 164 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 94 | 109 | IPR002130 | GO:0000413(InterPro)|GO:0003755(InterPro) | |
| Cec10g1892 | 164 | Pfam | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | 12 | 162 | IPR002130 | GO:0000413(InterPro)|GO:0003755(InterPro) | |
| Cec10g1892 | 164 | Gene3D | - | 3 | 164 | IPR029000 | - | |
| Cec10g1892 | 164 | ProSiteProfiles | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. | 15 | 162 | IPR002130 | GO:0000413(InterPro)|GO:0003755(InterPro) | |
| Cec10g1892 | 164 | ProSitePatterns | Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. | 46 | 63 | IPR020892 | GO:0003755(InterPro)|GO:0006457(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cec01g1326 | Cec-Chr1:25868946 | Cec10g1892 | Cec-Chr10:33753759 | 7.90E-44 | dispersed | |
| Cec05g0245 | Cec-Chr5:1997566 | Cec10g1892 | Cec-Chr10:33753759 | 1.30E-41 | dispersed | |
| Cec05g1984 | Cec-Chr5:31860299 | Cec10g1892 | Cec-Chr10:33753759 | 1.30E-37 | dispersed | |
| Cec09g1868 | Cec-Chr9:35315362 | Cec10g1892 | Cec-Chr10:33753759 | 2.90E-30 | dispersed | |
| Cec10g1892 | Cec-Chr10:33753759 | Cec02g0613 | Cec-Chr2:6089652 | 8.20E-33 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cec10g1892 | K12733 | - | csv:101222111 | 335.88 |