Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g1946 ATGGAAATGGATGATCAATATGCCCTCTCCGATCTCCGCCACCTCATCACTACTGCCCCATCTCGCTCTCATTTCCCTTCTTCTTCCTCAATTCCCCACCATGATCTCTCCTCCTCCACGGCCGCCGCCGCCGCCTTCCGCCACCACCATAATCCCTACGACCTCATCATGATGATGCCACGTGACACTCCGCTTCCCGACTTTCGCTCCGATTCCGCCACCACACCACCCGCCATCGTCTCCGCTCAGCCAGGTCCCTCCACTTTCGAGCTCGAAACCGCCTCCATCGCCGCCGACTGCGCCACCGCTCGATGGCCTCGCCAAGAAACTCTTACTCTCTTGGATATCAGATCTCGACTTGATTCTAAGTTCAAGGAAGCCAACCAAAAAGGCCCCCTTTGGGATGAAGTTTCTAGAATCATGGCTGAGGAACACAATTATCAAAGAAGTGGAAAAAAATGCAGAGAAAAGTTTGAGAATTTATATAAATATTACAAAAAAACAAAGGAAGGCAAAGCTGGAAGACAAGACGGTAAGAACTACAGATTCTTTAGGCAGTTGGAAGCTCTCTATGGTGAAACAAGCAATTCCCCTTCACTTCCAGATTCCCATTTTGTTGGAGACACCAACCTTAGATTCCAACAGAACGGGACCAACAACCCAACTGCGGCACCTCCGATGAGCCACGAAGCTCACCAGAAGCATTACTGCGATAGCCTCAGCCTCTCAAACACGTCAGAGTTCGGAACCTCGGCCTCGTCAGATGGCAACGACGACCCCAGCTCGGTTGGCATTATGGACAACGATTCAATGGAGAAGAGGAGGAAGAAGCGAGGCGGGAAATGCTGGAAGGCGAAAATCAAACAGTTCATCGACTCGCAAATGAGGAAGCTAATTGATAAACAAGAGGCTTGGTTGGAGAAGCTCATGAAAACTCTTGAACAAAAGGAAAAGGAGAGAATGATTCGCGAGGAGGAATGGAAGAGACAAGAAGTGTCAAGAATGGACAGGGAGAGAAGCTTTTGGGCAAAGGAGAGAGCATGGATAGAATCTAGAGATGCTGCATTAATGGATGCATTACAAAGGCTAACAGGACGAGAATTGAGAGATAATCAATACAACTCCTCACCCGACCTCGGATTAATGGTAGCCGAGCGTCATAGAAATAATAACGAGAACCAAAATGAGGACGGGAGCGAAATACTAAACAACAACACAGCTAGAGAATTACTAGCAGACAACAATAATTACCAAAGGAAAATAATAGACAATCAAGGCAACAAGAAACGCAAGGAGAATTCAACATCAACGGCCACCACCTACAATCTTTACTTCCAACAAACAAATTCCACCCTTTACAGTCGTGGCGGTGGCGGTGGCGGACCGTATGGCGGTGCCGCCGACATCAAAGAACAAAGTCCAAACAGTTCAAACGTGGGCGGTGGTGGCGGCGGCGGCGTGCAAGATAATTGCTTTCGCTTCTTGATGGGTGAAGGAGATCAATCTCAATCTGGTTTATGGGAAAATTTTGGTCTTAAACTCAACAATGGAAGTGACCAAACTTGA 1566 47.89 MEMDDQYALSDLRHLITTAPSRSHFPSSSSIPHHDLSSSTAAAAAFRHHHNPYDLIMMMPRDTPLPDFRSDSATTPPAIVSAQPGPSTFELETASIAADCATARWPRQETLTLLDIRSRLDSKFKEANQKGPLWDEVSRIMAEEHNYQRSGKKCREKFENLYKYYKKTKEGKAGRQDGKNYRFFRQLEALYGETSNSPSLPDSHFVGDTNLRFQQNGTNNPTAAPPMSHEAHQKHYCDSLSLSNTSEFGTSASSDGNDDPSSVGIMDNDSMEKRRKKRGGKCWKAKIKQFIDSQMRKLIDKQEAWLEKLMKTLEQKEKERMIREEEWKRQEVSRMDRERSFWAKERAWIESRDAALMDALQRLTGRELRDNQYNSSPDLGLMVAERHRNNNENQNEDGSEILNNNTARELLADNNNYQRKIIDNQGNKKRKENSTSTATTYNLYFQQTNSTLYSRGGGGGGPYGGAADIKEQSPNSSNVGGGGGGGVQDNCFRFLMGEGDQSQSGLWENFGLKLNNGSDQT 521
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 34281072 34283889 + CePI673135_10g019460.1 Cec10g1946 214861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g1946 521 PANTHER FI21293P1 92 434 - -
Cec10g1946 521 Coils Coil 299 326 - -
Cec10g1946 521 CDD GT1 104 169 - -
Cec10g1946 521 MobiDBLite consensus disorder prediction 247 264 - -
Cec10g1946 521 MobiDBLite consensus disorder prediction 212 226 - -
Cec10g1946 521 Pfam Myb/SANT-like DNA-binding domain 104 190 IPR044822 -
Cec10g1946 521 Gene3D - 105 167 - -
Cec10g1946 521 MobiDBLite consensus disorder prediction 455 484 - -
Cec10g1946 521 MobiDBLite consensus disorder prediction 247 279 - -
Cec10g1946 521 ProSiteProfiles Myb-like domain profile. 104 162 IPR001005 -
Cec10g1946 521 MobiDBLite consensus disorder prediction 212 234 - -
Cec10g1946 521 FunFam trihelix transcription factor PTL-like 105 167 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g2378 Cec-Chr5:35110296 Cec10g1946 Cec-Chr10:34281072 2.30E-47 dispersed
Cec08g0349 Cec-Chr8:9266247 Cec10g1946 Cec-Chr10:34281072 9.00E-35 dispersed
Cec08g0350 Cec-Chr8:9606595 Cec10g1946 Cec-Chr10:34281072 3.70E-21 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30444 PF13837 Myb_DNA-bind_4 2.40E-19 CL0123 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g1946 - - - 0.0