Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g1952 ATGGAAATGGAGAGCTCGCGGAGACCTTTCGATCGAACCAGGGAACCGGGTTTGAAGAAGCCGCGACTGGCCGATGAGGCTGAACGCGGTGGGAACATCAATGGCCGGCCGTTTCCGCAGAGACCAGTTGTTTCCGGGAACAATATTGTGCAACCACCCAGATTTCGAGCAAGTGATAGGGATTCGGGAAGTAGTGATTCTGGTCGAGGGGGGTATCAACCTCAGCCACCGCAGCATCAGGAGCTTGTGAGCCAGTACAGGACCGCCCTTGCGGAGCTGACTTTCAATTCCAAACCAATCATCACGAATTTGACCATAATCGCGGGTGAAAATCTTCAGGCTGCGAAGGCGATCTCTGCCACCGTTTACGCCAACATTCTCGAGGTTCCTAGTGAGCAGAAGCTACCATCACTTTATCTATTGGACAGTATTGTAAAGAATATTGGAAGAGATTATATAAAATACTTTGCAGCAAGACTACCGGAGGTATTCTGCAAAGCTTATAGGCAGGTTGACCCTTCTGTACATCCAAGTATGAGACATCTGTTTGGCACCTGGAAAGGAGTGTTTCCTCCTCAAACTCTGCAGATTATTGAGAAAGAACTTGGGTTCGTGCCTAGTGGTAGTTCTTCTTCTGGGGCCATAACCTCCAAGCCAGATTTGCAGGCACAACGTCCAACTCCCCATAGTATCCATGTAAATCCCAAGTATATAGAGAGGCAGCGGCTTCAGCAGTCAGGCAGGGTGAAAGGAATGACTAGTGATGCTACTGGTGTGACAACAAATGTAAGTCAGGATGTAGCCCAAGCCAAAATTAATACTGGACGTCCATGGGCAGATGCTCCAATTAAAGTGCTTGACATTCAGCGTCCCCTTAGAGATGCACCAAATGATATGGCACAAGAGAAGAACATCATGGCTGGATTTGCAGACTACGAATATGGTTCTGATCTTTCAAGGACATCAGGTGTTGGAAGAAGGGTCGTTGATGAAGGGCGAGACAAACCTTGGTCTTCAGCTGGAAACAATTTGGCTGAGAAACTATCTGGTCAAAGAAATGGGTTCAACATCAAGCTTGGATATGAAAATTACCCTGCACCCAAGTCTGCAAACACTGGTTCACGTCTACTGCCCGTGCAAAATTTTTCAAGCAGCAGCAGCAACAGAGTATTGTCTACTAACTGGAAGAACTCTGAGGAAGAGGAGTTTATGTGGGGTGAAATGAACTCTATGATGACAGGTCATGGTGCACCTGCTATCGCCGGTAGCACTGGAAAAGATCAATGGACTCCTGAGGATTCGGATAATTCGGGTATGGACAATAAGCCATTAAGTGTACGGGATACTAGGGCAAGTGTTGATAGAGAAGCTTCCAGTGATTCACAATCATCTGAGCAGAGAGAACTGGGGGATTCTGGACAACAAAGGTCCACGTGGCAACTGCAAGAGTCAATATCTCTGGATGGGCTAAGAGGCGGGGTTCCTAGAAAGAATTCAGGTCAGTCAGGAGGTTATAGTGCTACTCTTACTGCACTGTCAGGTGCTAACTCTTCATCTAATATTGGGGCTTCAGGACATGGGTTTCTTAATAAAGGAGGTTCAGGGCCCCTTGGGACTGTAAGCCATCAAAGATTTCCATCACGAAGTGTTGCATTCCCATCTGGACAACCACCCTTGCACCAACGCCCCCCTTCACCATTGTTAGTGGATCATGTTCCTCATCAAATACATGACCATAAAACAACTTCATTTTCTAATCTTGATCCACGTAAAAGGCATATGCAGGATGCTGCCCTTCGCCTGCATCCCAGCGTTCAACCAGATAATCTTCAAAAGCCCCTGCCTCATGACCTACAAGCTCCAGCTTCATCCATACCTGCGTCTCAACCTAGGCACCAGTTCTCTTTATCTGAGTCACTAAAAACTGATGTTACACAGTCGGAACTTTCTAGTCAGCATGCAGTATCAATTCCGGGCACCGATATTGGACCATCCTCATCAGCTGGGATAGTTCCAGATCATTTACCTGCAGAAATTTTGGGAGAGCCAAGCACTAGTAGTTTGTTGGCTGCTGTAATGAAGAGTGGACTTTTCTCCAACCATTCAATAACCAGTAGCATGCAGCAGAATATCGGCTTCCAAGATGTGGGAAATATGAAACCTCGCTCAAGCATTAAACCTCCTCTACCAAGCCGGTCTTCTCCTGCCCATACATTCGCAGAGCCAAAGATTCAGGGAGAATCCCCAGTAGGTCCTCCATCACTTGAAAGCCCATCAACTATGGTTAAGTTGTCTCGAACTAAGGTAGAAGAACCATCATTGTCATCTGATCCACTCCCACCTTCATCTCCAATGAACAGTGCATCCACTGAAACTTCAAATGTGGTAAATGATGCTTCTAGTCCAATTTCTAACCTTTTGAGCTCATTGGTTGCAAAGGGCCTTATATCAGCTTCAAAAGGAGAATTAACAAATAGTGTGACATCCCAGATGCCTTCACAGCATGAAAATTTGAAGTCAGGTGATACTGTGACTAGTTCTGTACCAGTTCCTTCCATCCCTGTTTCCTCTGCCAGTCACTCATCTATGAGACTTGAATCACCTTCAAAAGCTGCTGCTAGGAGCTCTAGTAGTCCACCTCCATCTGCCACAACTGAAATAAAGAACCTCATAGGCTTTGAGTTTAGTTCACATGTTATTCGCAAATTTCATCCATCTGTGATCAGTGGACTCTTTGATGATATTCCATACCAATGTAAGATCTGTGGTCTTAGACTGAAATGTGAAGAACAGTTGGAAACTCACTCACGGTGGCACACATTAAGAGCTGAGGCAAACAATTCTAGTAGCACACCAAGAAGATGGTATCCAAGTTCAAGTGATTGGATTTCTGGAAATGCGAGACTTCTACTTGATGCTGCAACTTCTCTGGACGAGTTCAACATGATGGAAGAAGATAATGAGCCGATGGTTCCTGCAGATGAAGGTCAATTTGCCTGTGTTATATGTGGTGAACTTTTTGAAGATTTTTATAGTCAAGAGTTGGGTAATTGGATGTTCAAAGGAGCAATGTATATCACCATCCCATCAGTGGGTAGCGAGGTAGGAAGCACAAATGAACAAGTTGCCAGAGGACCCATTGTGCACACGAATTGTTTGACTGAAAGTTCAGTATATGACGTGGGAGTGGCCACTGATATTAAGATGGACATGGATGTATGA 3222 45.47 MEMESSRRPFDRTREPGLKKPRLADEAERGGNINGRPFPQRPVVSGNNIVQPPRFRASDRDSGSSDSGRGGYQPQPPQHQELVSQYRTALAELTFNSKPIITNLTIIAGENLQAAKAISATVYANILEVPSEQKLPSLYLLDSIVKNIGRDYIKYFAARLPEVFCKAYRQVDPSVHPSMRHLFGTWKGVFPPQTLQIIEKELGFVPSGSSSSGAITSKPDLQAQRPTPHSIHVNPKYIERQRLQQSGRVKGMTSDATGVTTNVSQDVAQAKINTGRPWADAPIKVLDIQRPLRDAPNDMAQEKNIMAGFADYEYGSDLSRTSGVGRRVVDEGRDKPWSSAGNNLAEKLSGQRNGFNIKLGYENYPAPKSANTGSRLLPVQNFSSSSSNRVLSTNWKNSEEEEFMWGEMNSMMTGHGAPAIAGSTGKDQWTPEDSDNSGMDNKPLSVRDTRASVDREASSDSQSSEQRELGDSGQQRSTWQLQESISLDGLRGGVPRKNSGQSGGYSATLTALSGANSSSNIGASGHGFLNKGGSGPLGTVSHQRFPSRSVAFPSGQPPLHQRPPSPLLVDHVPHQIHDHKTTSFSNLDPRKRHMQDAALRLHPSVQPDNLQKPLPHDLQAPASSIPASQPRHQFSLSESLKTDVTQSELSSQHAVSIPGTDIGPSSSAGIVPDHLPAEILGEPSTSSLLAAVMKSGLFSNHSITSSMQQNIGFQDVGNMKPRSSIKPPLPSRSSPAHTFAEPKIQGESPVGPPSLESPSTMVKLSRTKVEEPSLSSDPLPPSSPMNSASTETSNVVNDASSPISNLLSSLVAKGLISASKGELTNSVTSQMPSQHENLKSGDTVTSSVPVPSIPVSSASHSSMRLESPSKAAARSSSSPPPSATTEIKNLIGFEFSSHVIRKFHPSVISGLFDDIPYQCKICGLRLKCEEQLETHSRWHTLRAEANNSSSTPRRWYPSSSDWISGNARLLLDAATSLDEFNMMEEDNEPMVPADEGQFACVICGELFEDFYSQELGNWMFKGAMYITIPSVGSEVGSTNEQVARGPIVHTNCLTESSVYDVGVATDIKMDMDV 1073
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 34324588 34331062 - CePI673135_10g019520.1 Cec10g1952 214867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g1952 1073 MobiDBLite consensus disorder prediction 534 570 - -
Cec10g1952 1073 CDD CID_Pcf11 83 195 IPR047415 -
Cec10g1952 1073 MobiDBLite consensus disorder prediction 1 29 - -
Cec10g1952 1073 FunFam polyadenylation and cleavage factor homolog 4 75 203 - -
Cec10g1952 1073 MobiDBLite consensus disorder prediction 714 797 - -
Cec10g1952 1073 MobiDBLite consensus disorder prediction 1 78 - -
Cec10g1952 1073 MobiDBLite consensus disorder prediction 427 443 - -
Cec10g1952 1073 MobiDBLite consensus disorder prediction 536 550 - -
Cec10g1952 1073 Pfam CID domain 88 196 IPR006569 -
Cec10g1952 1073 ProSiteProfiles CID domain profile. 78 206 IPR006569 -
Cec10g1952 1073 SUPERFAMILY ENTH/VHS domain 78 203 IPR008942 -
Cec10g1952 1073 MobiDBLite consensus disorder prediction 209 229 - -
Cec10g1952 1073 MobiDBLite consensus disorder prediction 411 505 - -
Cec10g1952 1073 MobiDBLite consensus disorder prediction 824 883 - -
Cec10g1952 1073 MobiDBLite consensus disorder prediction 780 797 - -
Cec10g1952 1073 ProSitePatterns Zinc finger C2H2 type domain signature. 919 939 IPR013087 -
Cec10g1952 1073 MobiDBLite consensus disorder prediction 622 640 - -
Cec10g1952 1073 SMART 558neu5 81 203 IPR006569 -
Cec10g1952 1073 MobiDBLite consensus disorder prediction 605 640 - -
Cec10g1952 1073 MobiDBLite consensus disorder prediction 752 772 - -
Cec10g1952 1073 ProSiteProfiles Zinc finger C2H2 type domain profile. 917 944 IPR013087 -
Cec10g1952 1073 MobiDBLite consensus disorder prediction 456 485 - -
Cec10g1952 1073 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 59 1070 IPR045154 GO:0000993(PANTHER)|GO:0000993(InterPro)|GO:0003729(InterPro)|GO:0003729(PANTHER)|GO:0005737(PANTHER)|GO:0005849(PANTHER)|GO:0006369(InterPro)|GO:0006369(PANTHER)|GO:0006378(PANTHER)|GO:0031124(InterPro)
Cec10g1952 1073 Gene3D - 73 203 IPR008942 -
Cec10g1952 1073 MobiDBLite consensus disorder prediction 64 78 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0282 Cec-Chr3:3125532 Cec10g1952 Cec-Chr10:34324588 4.10E-74 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g1952 K14400 - csv:101223169 1843.94