Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g1954 ATGGAAATGCCCGGCAGGAGGTTGAACTATACGCTTCTCAGTCAAATTCCAGACGACCAATACAGTGGCGGTGTTGCCGGAGCTTCGACAACGTTTAAAGAAACATCATCGGGAGAGGGGAAGAACGACAGGAGGAAGTTGGAAAGAGGATTGGATTGGGAAGCTGCTGGTGATCACAGGGCGGGCCAGCAGCAGCAGGTTAATTGGATCGGCAATATGTACTCGGCGTTTGGTTTGCAGAGGCAGTCCAGTGGAAGCAGCTTTGGAGAGAGCTCGATATCCGGGGAGTACTATGCACCGACACCATCTACTACGGTGGCTAATGAGACGGATGGGTTTGGTTGTACGCACGATGATGTGCTTAGAATTGGAGGCGATGCGAGAGCACAGATGGCCGAGATGGCCGCTGGGGCTGGAGGATCTTCTGCTAAGACCTGGGCGCAACAGACGGAGGAGAGTTATCAACTGCAGTTGGCATTGGCGCTTCGGCTTTCATCTGTGGCCACTTGTGCTGATGATCCTAATTTCTTAAATCCATTTCAGGATGATTCAGCTTTAAGGAGGTCGATGAGCTCTGTTGAGGCTGTGTCACATCGATTTTGGGTGAATGGCTGTCTATCGTACTTTGACAAAGTTCCTGATGGGTTTTATCTAATCCATGGAATGGATCCATATGTGTGGACTGTGTGCACCAGCCTGCCTGACAATGATCGCATGCCATCAATTGAATCTCTAAAGTCTGTTGATCCCAGTACAGATTCGTCAATTGAAGTTGTTCTGATTGATCGGCGCACTGATCCCAACTTAAAAGACCTCCAAAATTGGGTCCAAGGCATTTCTTGCAGCTCTATAACTACAGAAGAGGTTGTAGATCAGCTTGCAAAACTTGTCTGTAGGAGTTTGGGTGGCTCAGTTTCTGGAGAAGATGCGTTGGTGTCCATCTGGAGGGAGTGCAGTGATAACTTGAAGGAGACCTTAGGCTCAGTGGTTATTCCTCTTGGTGGACTCTCTGTAGGACTCTGCCGGCATCGTGCTCTTCTTTTCAAAGTGTTAGCTGACACAATTGATTTACCCTGTCGTGTTGCCAAGGGCTGTAAATATTGCTCATGCCATGATTCTTCTTCTTGTCTAGTTCAGTTTGGGCTTGACAAGGAGTATCTGGTTGACTTTTTTGGCAATCCTGGTTGCCTATATGAGCCTGATTCTTTACTCAATGGTCCATCCTCCATTTTGATCTCCTCGCCATTGCGATTTCCACGACTAAAGCCAGTAGAGCCTGCCATTGATTTCAGGTCACTGGCTAAACAGTACTTTTCAGATTGCCAGTTGCTCAATGTTGTTTTCGATGAAGCTTCCTCATGTAATCACACAGAAATTACTGTGGATGGAGAAGATGGCGCACTCCCATTGTATTTAAAGCAGTTTGATAGGAAGTTCACAAACAGAAGCAATCAAATGCTTGTCACTGGTGATAGTGATGAAAAATCCATTTTACTGCATGCAAAAACTTCGCAGCCTAACTCCCAAGACAGGGATTTCCAACTGTATAAACCACGTGATAATTCTCATAATCTTATACAACCAACTGTCCAGGTTGAGGATTCAATCCCACTGAAGTACGTTCCACATATTAATCGTGAAAGTGTGCAGTCACTTTTGGATATGTCCCAGCCAAGGATGGATTCTACTATGGACTTAAGGTTTGCACCGGGAGGTCAGCTAATACCAAGCACTCGGAGTAAAACACTTCCCCTTGGTGCGGAGGATTTGGACATTCCATGGAGTGATCTTGTTTTAAAAGAAAGAATTGGAGCAGGTTCCTTCGGAACTGTGCATCGTGCTGATTGGCATGGATCGGAAGTTGCTGTGAAGATCCTCACAGAACAAGACTTCCATCCTGAACGCGTTAATGAGTTTCTGAGAGAGGTTGCTATCATGAAATCCTTACGACATCCTAATATTGTACTGTTTATGGGTGCGGTGACCAAGCCACCAAACCTATCCATTGTCACGGAATATCTATCGAGAGGTAGCTTGTATAGGCTTTTGCATAAGTCAGGTGTCAAAGACATAGATGAAACCCGTCGGATAAATATGGCTTTTGATGTGGCAAAGGGAATGAACTATCTCCACAGACGTGATCCTCCAATTGTTCATCGTGATTTAAAATCACCTAATCTTTTAGTTGACAAGAAGTATACAGTAAAGGTTTGTGATTTTGGTCTCTCCCGTTTAAAGGCACGCACATTTCTTTCATCCAAATCCGCAGCTGGAACACCTGAATGGATGGCGCCAGAAGTACTACGTGATGAACCCTCAAATGAAAAGTCAGATGTTTACAGCTTTGGAGTGATCTTGTGGGAGTTGGCAACTTTGCAACAGCCATGGTGTAATCTAAACCCAGCTCAGGTTGTTGCTGCTGTTGGATTTAAGGGCAAAAGGCTTGACATCCCACGTGATGTAAATCCCAAATTGGCTTCCTTAATTGTGGCTTGCTGGGCCGATGAGCCGTGGAAACGTCCATCTTTTTCCACCATAATGGAAACCTTGAAGCCAATGACTAAACAAGCACCACCTCAACAAGCAAGGCCCGGTCCAAAGCGGTCGCTTTCAGACCAAAAGGACCGGTCCACTAAAACCGTACGGACAAAAGATGTAAAATCCCGCGTTGAAAGAATCCCCAGTGGGTTGTGCCCAGTTTCCCCCAACCACAATAACGGCCTTCCGAAACACCGCAGCTTCTGCGAAAACGATCTGATCAACGAAGGTCGGTTCTTCTTTCAATATTTGCCATTGCTTCCCTTCAATTTGTGGAGAATCCAAAGCCCTAAACTTTTTGGCAGTGTCTTAATGGGGTCCCGGCACGAGCAACGACACCACTGTAGAGCTACGACTCGATTCACAGTCACTGTCTCCACCGCCTTTGAATTTCTTTCCCCAGATTTTTATCCGACACCTTGTCGGCGGAAACTTCTGTTTTGCGCCCTTATATATACTCTGCTCCATTTACAGAAATTCATAATGAAACCCATTGAGGGTGATTCGGTTTCTCCTATCGAGGTATCTTCTTCTTCTGCTCAATCGGAGTTTGATGCTGCTGGGTTTTCTTCAGACCCTGAATTGATGTTATTGCCCTTTTCGCGGCCATTAATGGGTTCTGAATCGTTTTCTCCTTGTGGGTCTTTTCTTGAGGATACAGCAGCAGGGCTTTCGATGGTGAGTATTGGTTTTTCTTCGTCTCCATCTACCGGAGACTTTTTGGCTGAAAACCCAATGCCATCTTCTTCTGCACACCACATGTTCGACGTAATGCTTGAACCAGATAAAGGAGCTTTGGATCCATTTGTGGTGCCATCTATGGGGAGTGATGTGCCTCAACCGCTGGAATCCCTTCATGGCCAGTTTGTTCCGCCATTTCTGTGGAAGACTTTCGACATTGTTGAAGATCCTGCGCTTGATCCGATTGTATCTTGGGGTTCAGCGGGGCAGAGCTTTGTGGTTTGGGATCCCGTGGAGTTTTCTAGAGTGATTCTTCCTTCTAATTTCAAGCACAACAACTTCTCCAGTTTTGTCAGACAGCTAAACACTTATGTGGGTATTGCAGTACAGCCTCTAATGGCTGCTGTGGTCTATGAGGATGAGGTCCCCCCCCCTCCAATCTCAATGCCTGGAGAAATACTCCCCTCCAAGTGTTTGAAGGGGATTCAGGACTTCCATCTTCATCAGGGGTTCCGCAAGATTGATACGGACAAGTGGGAGTTTGCGAATGAAGCTTTCCAACGAGGGAAAAAGCACTTATTAAAGAACATTCAGAGGCGCAAATCACCTCATTCTCAGCAGATTGGAAGTTTGATAGGGCCATCTAGTGGAGGAGGGAAGTCTGGAATAGAAGATGAGATTGGCAGGTTAAAGAAAGAGAGGAGGATGTTAATGCAGGAGGTTGTTGAATTGCAGCAGCAGCAGAAGGGGACTGCTCAGCAGGTGACTACGGTGAACCGACGTCTCCAGTCAGCAGAGCAGAGGCAGAAGCAGATGATTTCTTTCTTGGCAAAGTTGCTTCGGAATCCAGAATTCTTATTTCGCTTGCAGAAAAAGAAGGAGCAGAAAGATATCGATTCCCCAAGGACGAAACGGAAAATTGTTAAGCAGCATAAACATGAAGCAGATGGTTTTACACCGCCCATGGAAGGGCAGATTGTAAAATACCAATCTGATTGGGAAAGTCTCGCCAGATCTTCAACAGCACTGGATTTGAATCCAGGCCTGCCTGAAGGACCTTTTGCTTACCTTCTGGAGGGAGTATTTGGAGAATTGGGATCAATTCCAGAGAGTATGCCTAATTTTCAATTTAAGAATGTTTCATCAAGCGATGTAATTGCGTCCAAGGAATTAGCATTCCATCATGGAATTGTAAAACCAACAGAGGAGCTGAGGAGGGTAGAGGCTTCAAACATGTCAATGGAGGATCAACATTTCAAGGGAAAGTCTATTGAGAGTCCCCCAGAATCCAATCCTGACTATTTTCTCTCTTTAACAGAGGATATTCTACAGTCCTCACATCAGGAAACTGGAAGTGTCATTAAACCAGAAGAAATTTGGAACGCATATTTGAATGTTGATGCTGGTTCATCCGGTTCAAGCAACGAGTTGTGGAGTAATCCAGTCGACTTCGAGGATCCATTTTTGCAAGTCTCTAGCCGACTGTCAACAATCTGGGATTTGGGCTCCCAGCAGGCTGGAGACTCGGGCACAGATAAGTGGTCAGCTTCTGGTTTCCCATTCGACGATCCAGATAGTCAAGTTTATCCCAAAAATGCAGAAGACTCAGATAATAAATAA 4839 45.71 MEMPGRRLNYTLLSQIPDDQYSGGVAGASTTFKETSSGEGKNDRRKLERGLDWEAAGDHRAGQQQQVNWIGNMYSAFGLQRQSSGSSFGESSISGEYYAPTPSTTVANETDGFGCTHDDVLRIGGDARAQMAEMAAGAGGSSAKTWAQQTEESYQLQLALALRLSSVATCADDPNFLNPFQDDSALRRSMSSVEAVSHRFWVNGCLSYFDKVPDGFYLIHGMDPYVWTVCTSLPDNDRMPSIESLKSVDPSTDSSIEVVLIDRRTDPNLKDLQNWVQGISCSSITTEEVVDQLAKLVCRSLGGSVSGEDALVSIWRECSDNLKETLGSVVIPLGGLSVGLCRHRALLFKVLADTIDLPCRVAKGCKYCSCHDSSSCLVQFGLDKEYLVDFFGNPGCLYEPDSLLNGPSSILISSPLRFPRLKPVEPAIDFRSLAKQYFSDCQLLNVVFDEASSCNHTEITVDGEDGALPLYLKQFDRKFTNRSNQMLVTGDSDEKSILLHAKTSQPNSQDRDFQLYKPRDNSHNLIQPTVQVEDSIPLKYVPHINRESVQSLLDMSQPRMDSTMDLRFAPGGQLIPSTRSKTLPLGAEDLDIPWSDLVLKERIGAGSFGTVHRADWHGSEVAVKILTEQDFHPERVNEFLREVAIMKSLRHPNIVLFMGAVTKPPNLSIVTEYLSRGSLYRLLHKSGVKDIDETRRINMAFDVAKGMNYLHRRDPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKARTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWCNLNPAQVVAAVGFKGKRLDIPRDVNPKLASLIVACWADEPWKRPSFSTIMETLKPMTKQAPPQQARPGPKRSLSDQKDRSTKTVRTKDVKSRVERIPSGLCPVSPNHNNGLPKHRSFCENDLINEGRFFFQYLPLLPFNLWRIQSPKLFGSVLMGSRHEQRHHCRATTRFTVTVSTAFEFLSPDFYPTPCRRKLLFCALIYTLLHLQKFIMKPIEGDSVSPIEVSSSSAQSEFDAAGFSSDPELMLLPFSRPLMGSESFSPCGSFLEDTAAGLSMVSIGFSSSPSTGDFLAENPMPSSSAHHMFDVMLEPDKGALDPFVVPSMGSDVPQPLESLHGQFVPPFLWKTFDIVEDPALDPIVSWGSAGQSFVVWDPVEFSRVILPSNFKHNNFSSFVRQLNTYVGIAVQPLMAAVVYEDEVPPPPISMPGEILPSKCLKGIQDFHLHQGFRKIDTDKWEFANEAFQRGKKHLLKNIQRRKSPHSQQIGSLIGPSSGGGKSGIEDEIGRLKKERRMLMQEVVELQQQQKGTAQQVTTVNRRLQSAEQRQKQMISFLAKLLRNPEFLFRLQKKKEQKDIDSPRTKRKIVKQHKHEADGFTPPMEGQIVKYQSDWESLARSSTALDLNPGLPEGPFAYLLEGVFGELGSIPESMPNFQFKNVSSSDVIASKELAFHHGIVKPTEELRRVEASNMSMEDQHFKGKSIESPPESNPDYFLSLTEDILQSSHQETGSVIKPEEIWNAYLNVDAGSSGSSNELWSNPVDFEDPFLQVSSRLSTIWDLGSQQAGDSGTDKWSASGFPFDDPDSQVYPKNAEDSDNK 1612
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 34337981 34353810 - CePI673135_10g019540.1 Cec10g1954 214869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g1954 1612 Gene3D - 1132 1274 IPR036388 -
Cec10g1954 1612 MobiDBLite consensus disorder prediction 1277 1297 - -
Cec10g1954 1612 SMART serkin_6 597 854 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec10g1954 1612 FunFam Serine/threonine-protein kinase CTR1 676 860 - -
Cec10g1954 1612 PRINTS Tyrosine kinase catalytic domain signature 711 729 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec10g1954 1612 PRINTS Tyrosine kinase catalytic domain signature 671 684 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec10g1954 1612 PRINTS Tyrosine kinase catalytic domain signature 777 799 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec10g1954 1612 PRINTS Tyrosine kinase catalytic domain signature 821 843 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec10g1954 1612 Coils Coil 1293 1320 - -
Cec10g1954 1612 SUPERFAMILY Protein kinase-like (PK-like) 579 850 IPR011009 -
Cec10g1954 1612 PRINTS Heat shock factor (HSF) domain signature 1139 1162 IPR000232 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec10g1954 1612 PRINTS Heat shock factor (HSF) domain signature 1190 1202 IPR000232 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec10g1954 1612 PRINTS Heat shock factor (HSF) domain signature 1177 1189 IPR000232 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec10g1954 1612 SUPERFAMILY Winged helix DNA-binding domain 1135 1273 IPR036390 -
Cec10g1954 1612 MobiDBLite consensus disorder prediction 1369 1391 - -
Cec10g1954 1612 CDD STKc_MAP3K-like 603 850 - -
Cec10g1954 1612 Pfam HSF-type DNA-binding 1139 1273 IPR000232 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec10g1954 1612 Gene3D Transferase(Phosphotransferase) domain 1 676 863 - -
Cec10g1954 1612 MobiDBLite consensus disorder prediction 1575 1612 - -
Cec10g1954 1612 ProSiteProfiles Protein kinase domain profile. 597 854 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec10g1954 1612 SMART hsfneu3 1135 1273 IPR000232 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec10g1954 1612 Pfam Protein tyrosine and serine/threonine kinase 598 850 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec10g1954 1612 PANTHER SERINE-THREONINE PROTEIN KINASE 150 853 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Cec10g1954 1612 FunFam Serine/threonine-protein kinase isoform 1 587 675 - -
Cec10g1954 1612 Pfam Ethylene-responsive protein kinase Le-CTR1 193 397 - -
Cec10g1954 1612 ProSitePatterns Serine/Threonine protein kinases active-site signature. 717 729 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec10g1954 1612 MobiDBLite consensus disorder prediction 853 886 - -
Cec10g1954 1612 FunFam Heat stress transcription factor B-4 1131 1206 - -
Cec10g1954 1612 MobiDBLite consensus disorder prediction 868 886 - -
Cec10g1954 1612 Gene3D Phosphorylase Kinase; domain 1 590 675 - -
Cec10g1954 1612 MobiDBLite consensus disorder prediction 19 46 - -
Cec10g1954 1612 MobiDBLite consensus disorder prediction 19 36 - -
Cec10g1954 1612 ProSitePatterns Protein kinases ATP-binding region signature. 603 624 IPR017441 GO:0005524(InterPro)
Cec10g1954 1612 MobiDBLite consensus disorder prediction 1369 1395 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g0572 Cec-Chr5:4654143 Cec10g1954 Cec-Chr10:34337981 7.70E-44 dispersed
Cec05g1963 Cec-Chr5:31680992 Cec10g1954 Cec-Chr10:34337981 4.10E-116 dispersed
Cec06g0456 Cec-Chr6:5147762 Cec10g1954 Cec-Chr10:34337981 1.10E-90 dispersed
Cec10g0148 Cec-Chr10:1430056 Cec10g1954 Cec-Chr10:34337981 1.40E-46 dispersed
Cec10g1954 Cec-Chr10:34337981 Cec11g1164 Cec-Chr11:23849824 2.90E-45 dispersed
Cec11g1517 Cec-Chr11:29376439 Cec10g1954 Cec-Chr10:34337981 8.00E-173 transposed
Cec01g1612 Cec-Chr1:30762998 Cec10g1954 Cec-Chr10:34337981 2.90E-120 wgd
Cec10g1954 Cec-Chr10:34337981 Cec04g1129 Cec-Chr4:30890404 0.00E+00 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30445 PF07714 PK_Tyr_Ser-Thr 4.40E-70 CL0016 Cec TF
72342 PF07714 PK_Tyr_Ser-Thr 4.40E-70 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g1954 K14510 - csv:101208452 1632.85