Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g1964 ATGATGATGATGATGATGATGATGATGATGATGGGGAAGGGGAAGGGGAAGGTGGGGGTGAAGATTTTCAGTTCCGCCATAACTTTCGTTTTCACTCTTACCCTTTTGGTCTCTCCTTCTCTTTCTTCAGATGATTCTTCTGCTCTCACTCGCTTCCGTCTTCAAGCTGATTCCCATGGCGGTTTACTAAGAAATTGGACTGGTTCTGATGCTTGTGCTTCTTCATGGCGGGGAGTTCAGTGCTCTGTTAATGGCCGTGTTGTTGCTCTTTCTCTTCCTTCTATGAACTTACGAGGCCCCATTGAGTCTCTAGCGCCGCTCGATCAGCTTCGCCATCTTGACCTCCATGACAACCGTTTGAACGGAACCATTTCGCCGCTTGTTAACTGTACGAATCTTAAACTGTTGTATCTTTCCGGCAATGACTTCTCCGGCGAGATTCCGCCGGAGATCTCGTCTCTCAGGCGACTCCTCCGGGTGGATTTGTCCGATAACAACATCCGCGGTGGAATTCCTGAGGATATTTCTAAATTGTCTAGGCTCCTCACGTTACGTTTGCAGAACAATGTCCTCTCCGGTACGGTGCCTGATCTCTCTGTTTCGCTTGTGAACCTCACTGAACTTAATTTAACCAACAATGAACTGTACGGACGGTTGCCGGACGGGATGTTGAAGAAATTCGGTGAGAAGAGTTTCACTGGAAACGAAGGGGTTTGTGGATCGAGTCCGTTACCGATCTGTTCGGTTACTGGTTCACCGCCGACGTCGGATTCTACCAGAACGGTACCTTCAAATCCAAGTTCATTGCCGCAAAACCCTATTATTAGTCCGAACAGTAAAGAATCTCGAAGAGGGCTCAGCCCTGGCGTCATTGTCGCGATTGTGATCGCGAATTGCGTTGCATTGCTTGTGATTATCTCGTTCATCGTCGCGTATTACTGCGCTCGTGATCGTGATCGGAGTTCGAGTTCCATGACCGGAAGCGAGAGCGGGAAGAGAAGGAAGAGCGGAAGTAGCTACGGAAGCGAGAAGAAAGTGTACGCCAATGGCGGTGGTGACAGTGATGGCACTAACGCGACAGACAGAAGCAAACTAGTGTTCTTCGATTGGAAGAAGCAATTCGAACTTGAAGATTTGCTGAGAGCGTCGGCGGAGATGCTCGGAAAAGGAAGCTTGGGGACGGTTTACCGTGCGGTTCTTGACGACGGTTGTACGGTGGCGGTGAAGAGGTTGAAAGATGCAAACCCATGTCCGAGGAAGGATTTTGAGCAGTATATGGATGTGATTGGGAAGCTGAAACATCCCAATATTGTGAGATTGAGAGCTTTTTACTATGCTAAAGAAGAAAAGCTTCTGGTTTATGATTATCTTCCTAATGGGAGTCTACATTCTCTTCTCCATGGAAATCGAGGCCCAGGGAGGATTCCATTGGATTGGACGACCAGGATCAGTTTAGTTCTGGGAGCTGCTCGTGGCTTAGCAAGAATCCATGGAGAATACAGTGCTTCAAAGATTCCCCATGGGAATGTCAAATCTTCCAATGTTCTTCTTGACAAAAATGGAGTTGCTTGCATTTCTGATTTTGGGTTATCTTTGCTTCTCAACCCAGTCCATGCCATTGCAAGGTTGGGAGGCTACAAGGCCCCGGAACAAGACGAGACTAAACGTCTCTCTCAAAAAGCAGATGTTTATAGCTTTGGAGTCTTATTGCTCGAAGTCTTAACTGGACGTGCACCGTCGCTCTACCCGTCACCTTCGAACCCAAGAAGCGACGACGAAGATCAGCCAGTGGACCTCCCGAAATGGGTTCGATCCGTGGTGAAGGAAGAGTGGACAGCTGAGGTTTTTGATCCAGAGCTATTAAGGTACAAGAACATTGAGGAGGAGCTTGTGTCCATGCTTCATGTTGGGTTGGCTTGTGTTCTTCCTCAGCCTGAGAAGAGACCAACAATGGCGGAAGTGGCGAAGATGATCGAAGATATTAGGGTCGAGCAATCCCCGCTCGGAGAAGATTACGACGAATCGCGCAATTCGCTTTCGCCTTCCCTAGCCACCACAGAAGATGGTATGTAG 2073 48.43 MMMMMMMMMMMGKGKGKVGVKIFSSAITFVFTLTLLVSPSLSSDDSSALTRFRLQADSHGGLLRNWTGSDACASSWRGVQCSVNGRVVALSLPSMNLRGPIESLAPLDQLRHLDLHDNRLNGTISPLVNCTNLKLLYLSGNDFSGEIPPEISSLRRLLRVDLSDNNIRGGIPEDISKLSRLLTLRLQNNVLSGTVPDLSVSLVNLTELNLTNNELYGRLPDGMLKKFGEKSFTGNEGVCGSSPLPICSVTGSPPTSDSTRTVPSNPSSLPQNPIISPNSKESRRGLSPGVIVAIVIANCVALLVIISFIVAYYCARDRDRSSSSMTGSESGKRRKSGSSYGSEKKVYANGGGDSDGTNATDRSKLVFFDWKKQFELEDLLRASAEMLGKGSLGTVYRAVLDDGCTVAVKRLKDANPCPRKDFEQYMDVIGKLKHPNIVRLRAFYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHGEYSASKIPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVHAIARLGGYKAPEQDETKRLSQKADVYSFGVLLLEVLTGRAPSLYPSPSNPRSDDEDQPVDLPKWVRSVVKEEWTAEVFDPELLRYKNIEEELVSMLHVGLACVLPQPEKRPTMAEVAKMIEDIRVEQSPLGEDYDESRNSLSPSLATTEDGM 690
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 34432659 34434836 + CePI673135_10g019640.1 Cec10g1964 214879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g1964 690 MobiDBLite consensus disorder prediction 665 690 - -
Cec10g1964 690 SUPERFAMILY L domain-like 43 223 - -
Cec10g1964 690 MobiDBLite consensus disorder prediction 249 284 - -
Cec10g1964 690 Gene3D Ribonuclease Inhibitor 42 198 IPR032675 -
Cec10g1964 690 CDD STKc_IRAK 387 661 - -
Cec10g1964 690 Pfam Leucine rich repeat N-terminal domain 43 82 IPR013210 -
Cec10g1964 690 MobiDBLite consensus disorder prediction 320 355 - -
Cec10g1964 690 FunFam Nuclear pore complex protein NUP107 42 197 - -
Cec10g1964 690 MobiDBLite consensus disorder prediction 320 335 - -
Cec10g1964 690 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 457 670 - -
Cec10g1964 690 FunFam pollen receptor-like kinase 1 352 456 - -
Cec10g1964 690 Pfam Leucine Rich Repeat 157 178 IPR001611 GO:0005515(InterPro)
Cec10g1964 690 Pfam Leucine Rich Repeat 204 222 IPR001611 GO:0005515(InterPro)
Cec10g1964 690 MobiDBLite consensus disorder prediction 672 690 - -
Cec10g1964 690 Pfam Protein tyrosine and serine/threonine kinase 385 656 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec10g1964 690 ProSiteProfiles Leucine-rich repeat profile. 109 131 IPR001611 GO:0005515(InterPro)
Cec10g1964 690 PANTHER OS05G0588300 PROTEIN 28 667 IPR050994 -
Cec10g1964 690 Gene3D Phosphorylase Kinase; domain 1 354 456 - -
Cec10g1964 690 MobiDBLite consensus disorder prediction 249 283 - -
Cec10g1964 690 ProSiteProfiles Protein kinase domain profile. 381 663 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec10g1964 690 Gene3D Transferase(Phosphotransferase) domain 1 457 679 - -
Cec10g1964 690 SUPERFAMILY Protein kinase-like (PK-like) 385 658 IPR011009 -
Cec10g1964 690 Pfam Leucine Rich repeats (2 copies) 109 144 IPR025875 -
Cec10g1964 690 Gene3D Ribonuclease Inhibitor 201 247 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g2466 Cec-Chr5:35796823 Cec10g1964 Cec-Chr10:34432659 1.00E-63 dispersed
Cec06g1205 Cec-Chr6:24677464 Cec10g1964 Cec-Chr10:34432659 7.10E-91 dispersed
Cec09g2212 Cec-Chr9:39040173 Cec10g1964 Cec-Chr10:34432659 2.30E-51 dispersed
Cec10g1964 Cec-Chr10:34432659 Cec11g0278 Cec-Chr11:3025179 2.70E-93 dispersed
Cec02g2396 Cec-Chr2:41195035 Cec10g1964 Cec-Chr10:34432659 1.70E-08 transposed
Cec04g1389 Cec-Chr4:33540120 Cec10g1964 Cec-Chr10:34432659 9.20E-70 transposed
Cec10g1964 Cec-Chr10:34432659 Cec11g1781 Cec-Chr11:32008008 3.30E-43 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72343 PF00069 Pkinase 2.30E-33 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g1964 - - - 0.0