Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g1979 ATGTTCAAGTTTTGGGGATCTCAAGAGGAACAGGTCCGCCCTCCACAAGATGTTACCACACAATCGTGGTATCCACCATCTGTTAGCTCCTCTCGCCCTGCAACTCCAGGTAGCACCTCCTCCAACCATTCCAGTTCACAAAGGCTTTCTGATAGGCCTCAATCTCCATCACACGTTTCACCTGCTGAAGCTGCAGGCATTATTTCTGCCTTGAAAGACAAAAGTGTTGATGAGTTACGAAAGCTTTTGTCGGACAAGGATGCATATAATCAGTTCTTCCTTTCACTTGACCAGGTCAAAATTCAGAACAATCTAAGAGATGAGCTGCGTAAGGAAACTCTTCAGCTTGCTAGTGAGAACTTGGAAAAGGAACCACGCATCATGGAACTCAGAAACCAGTGCAGAATTATTCGGACAACTGAACTGGCTGCGGCCAAGGAGAAGCTAAATGAACTTGACCAAAAGAAAGAGGAGATTTTGAACCTCTGTTCTCCTGCCTCACTTCTCCGAAGGCTTCAAGAGAGTATGAAGGAGACGGAAGAGGAGTCGGACAATCTTCACAGGCAGCTCCTTGACAGAGAGATAGATTTGGGTTCTTTTACCCACAAATACAAGAAGCTGCGTATGAATTACCACCGGCGTGCTCTCATTCAACTTGCTGCGAAAACCACCTGA 675 46.22 MFKFWGSQEEQVRPPQDVTTQSWYPPSVSSSRPATPGSTSSNHSSSQRLSDRPQSPSHVSPAEAAGIISALKDKSVDELRKLLSDKDAYNQFFLSLDQVKIQNNLRDELRKETLQLASENLEKEPRIMELRNQCRIIRTTELAAAKEKLNELDQKKEEILNLCSPASLLRRLQESMKETEEESDNLHRQLLDREIDLGSFTHKYKKLRMNYHRRALIQLAAKTT 224
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 34553684 34558384 - CePI673135_10g019790.1 Cec10g1979 214894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g1979 224 Coils Coil 102 122 - -
Cec10g1979 224 MobiDBLite consensus disorder prediction 12 57 - -
Cec10g1979 224 Coils Coil 169 189 - -
Cec10g1979 224 SUPERFAMILY Endosomal sorting complex assembly domain 164 214 IPR037202 -
Cec10g1979 224 Pfam Modifier of rudimentary (Mod(r)) protein 72 215 IPR009851 -
Cec10g1979 224 Gene3D Helix hairpin bin 148 219 IPR029012 -
Cec10g1979 224 ProSiteProfiles VPS37 C-terminal domain profile. 146 224 IPR009851 -
Cec10g1979 224 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 37 13 223 - GO:0000813(PANTHER)|GO:0006612(PANTHER)|GO:0006623(PANTHER)|GO:0043162(PANTHER)
Cec10g1979 224 MobiDBLite consensus disorder prediction 1 62 - -
Cec10g1979 224 Coils Coil 142 162 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g1979 K12185 - csv:101204280 414.461