Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g2008 ATGGCCGCCTCAAATTCCACCTCCCCCAACCCCTTCTGGTACCAGTTGCTCTTTGGCCGGTGGTTCTCTGTTTTTGCTTCCATTCTCATCATGTCCGTCTCCGGCGCCACCTATATGTTTGGCCTCTACTCCTCCGACATCAAATCCTCCTTAGGCTACGACCAAACCACCGTCAATTTGCTCAGCTTCTTCAAGGACTTAGGCGGCAATGTCGGCGTCATCAGCGGCCTCATCAACGAGGTCGCTCCGGCCTGGATCGTTCTTCTCATCGGCGCCATCATGAACCTATTCGGCTACACCATGATTTGGCTGGCTGTAACCAATCGGATCCCCAAGCCCCAGATCTGGCATATGTGTCTCTACATTTGTATAGGAGCTAATTCTCAGACCTTTGCTAATACAGGGGCTCTTGTAACCTCCGTCAAAAACTTCCCGGAAAGTCGTGGTAGCGTTTTGGGACTTTTGAAGGGATTCGTCGGCTTAAGCGGCGCTATTTTGTCCCAGCTTTTCCATGCCTTTTATGGCAACAACTCCAAGTCTCTTATCCTCTTAATCGCTTGGCTTCCTGCAGCCGTCTCTGTTACTTTCCTCCGTTTCGTTCGCATCATTAAGGATCTCCGGCAGCCCAACGAGCTCAAAGTTTTTTACCATATCCTTTATATTTCTCTTAGCCTTGCTGGGTCGTTAATGGTTTTGATTATTTTGCAAAATCGTCTCCGATTTCAACAAATACAATACGCGGGAAGTGTCATTGTCGTGATTGTTCTGCTTCTACTGCCTCTAGCCATTGTTTTCAGAGAGGAATTGAGTGTTTGGAAGAATAAAACCGCAGGTCCAATTTTACAATTAGAGCTAGCATCACAACAACCACTCCCACCAGTGACTTCGGTGGTGCCACCAGCGCCGCCGAGCCCTCCCTCGGGCACTTGTTTTAAAAGCACGTTTAAACCCCCGAACAGAGGAGAAGATTACACAATTCCACAAGCCATTTTCAGCATCGATATGATAATTATTTTTATCGCCACAATTTGTGGTGTCGGTGGAACATTGACGGCAATCGACAATTTGGGCCAAATCGGAGAGTCTTTAGGATACCCATCTCACAGTACCACCACATTCATCTCTCTTGTCAGCATATGGAATTACCTCGGCCGTGTAGTCTCCGGATTCGTATCAGAATATTTCTGGAAAAAGTACAAAGTCCCACGTCCTCTATTTCTCTTCGCGACACTTATTTTATCCTGCGTCGGCCATCTTCTAATCGCATTCGGAGTTCCAAATTCGCTGTATTTTTCTTCAATCATAATTGGGTTCTGCTTTGGTGCACAATGGCCGTTGATCTTCGCAATCATATCGGAAATTTTCGGGCTGAAGTACTACGCAACTCTATACAATTTGGGAGGAACGGCAAGCCCGATTGGGGCGTATATTATGAGCGTGAGAGTGGCGGGTCATTTGTACGACAAAGAGGCGCAGCGACAGATGGAGGCGGCGGGACGACGGAGAAAAATAGGAGAGGATTTGATATGCTTGGGAGTGGAATGTTATAGAAAGGCGTTTCTTATAATCACAGCAGCGACGGTGTTGGGAGGACTTGTTTCGCTGATTTTGGTTGTTCGGACATGGAAGTTTTATAAGGGCGATATTTACAGGAAGTTTAGGGAGGAGGAAGGTGAAGACGTAGACATGAAAATTGCCGCTCCAACAGATAGTGTGTTGACGGCCACAAAATCTGAATCTGTTTAG 1746 47.02 MAASNSTSPNPFWYQLLFGRWFSVFASILIMSVSGATYMFGLYSSDIKSSLGYDQTTVNLLSFFKDLGGNVGVISGLINEVAPAWIVLLIGAIMNLFGYTMIWLAVTNRIPKPQIWHMCLYICIGANSQTFANTGALVTSVKNFPESRGSVLGLLKGFVGLSGAILSQLFHAFYGNNSKSLILLIAWLPAAVSVTFLRFVRIIKDLRQPNELKVFYHILYISLSLAGSLMVLIILQNRLRFQQIQYAGSVIVVIVLLLLPLAIVFREELSVWKNKTAGPILQLELASQQPLPPVTSVVPPAPPSPPSGTCFKSTFKPPNRGEDYTIPQAIFSIDMIIIFIATICGVGGTLTAIDNLGQIGESLGYPSHSTTTFISLVSIWNYLGRVVSGFVSEYFWKKYKVPRPLFLFATLILSCVGHLLIAFGVPNSLYFSSIIIGFCFGAQWPLIFAIISEIFGLKYYATLYNLGGTASPIGAYIMSVRVAGHLYDKEAQRQMEAAGRRRKIGEDLICLGVECYRKAFLIITAATVLGGLVSLILVVRTWKFYKGDIYRKFREEEGEDVDMKIAAPTDSVLTATKSESV 581
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 34857088 34858833 - CePI673135_10g020080.1 Cec10g2008 214923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g2008 581 CDD MFS_Mch1p_like 19 530 - -
Cec10g2008 581 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 20 554 - GO:0016020(PANTHER)
Cec10g2008 581 SUPERFAMILY MFS general substrate transporter 24 547 IPR036259 -
Cec10g2008 581 Pfam Nodulin-like 20 265 IPR010658 -
Cec10g2008 581 Gene3D MFS general substrate transporter like domains 329 544 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1240 Cec-Chr2:28901523 Cec10g2008 Cec-Chr10:34857088 3.60E-85 dispersed
Cec06g1846 Cec-Chr6:31851492 Cec10g2008 Cec-Chr10:34857088 3.70E-87 dispersed
Cec06g1847 Cec-Chr6:31856416 Cec10g2008 Cec-Chr10:34857088 6.30E-65 dispersed
Cec10g2008 Cec-Chr10:34857088 Cec11g0736 Cec-Chr11:8332973 5.80E-81 dispersed
Cec10g2008 Cec-Chr10:34857088 Cec10g2011 Cec-Chr10:34883102 1.20E-139 proximal
Cec10g2008 Cec-Chr10:34857088 Cec10g2012 Cec-Chr10:34884231 1.10E-26 proximal
Cec04g0337 Cec-Chr4:13173505 Cec10g2008 Cec-Chr10:34857088 4.70E-157 transposed
Cec10g2008 Cec-Chr10:34857088 Cec04g1084 Cec-Chr4:30365522 1.00E-207 wgd
Cec10g2008 Cec-Chr10:34857088 Cec05g2349 Cec-Chr5:34731182 1.90E-204 wgd
Cec10g2008 Cec-Chr10:34857088 Cec08g0813 Cec-Chr8:19977796 3.30E-193 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g2008 - - - 0.0