Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cec10g2011 | ATGGCCGCCTCAAATCCCACCTCCGGCAACCCATTCTGGCACCAGTTGTTCTTTGGGCGGTGGTTCTCTGTCTTTGCTTCCTTTCTCATCATGTCCGTCTCCGGAGCCAGCTTCATGTTTGCCCTTTACTCCTCCGACATCAAATCCTCATTAGGCTACGACCAAACCACCCTCAATTTACTCAGCTTCGTCAAGGACTTAGGCAGCAATGCCGGCATCATCAGTGGCCTCATCAACGAGGTCCCTCCGGCCTGGGTGGTTCTTCTAATCGGCGCCGTCATGAACCTTTTTGGCTACACCATGATTTGGCTGGCCGTAACCAATCGGATCCCCAAGCCCCAAATCTGGCATATGTGTCTTTACATTTGCATTGGAGCTAATTCTCAGACCTTTCCAAATACAGGGACTCTTGTAACCTCCGTCATAAATTTCCCGGAAAGTCGTGCTTGTGTTTTGGGGCTTTTGAAGGGATTCGTCGGCTTAAGCGGCGCCATTTTGTCCCAGCTTTTCCATGCATTTTATGGCAACAACTCCAAATCTTTTATCCTCTTAATCGCCTGGCTTCCCGCCGCCATCTCTGTTATTTTCCTCCGCTTCATTCGCATCATTAAGGATCTCCGGCAGCCCAACGAGCTCAAAGTTTTTTACCATATCCTTTATATTTCTCTCGGCCTTGCAGGGACCTTAATGGTTTTAATTATTTTGCAAAATCATCTTCGATTTCAACAAATACAATATGTTGGAAGTGTCATTGTTGTCATTGTTTCGCTTTTACTACCTCTAGCCATCGTTTTCAGAGAGGAATATAGTGTTTGGAAGAGTAAAATCAAAAACCCAATTTCACAATTAGAGTTAGCGTCCAAACAACCCCGCCGCAGTCATTGA | 885 | 46.33 | MAASNPTSGNPFWHQLFFGRWFSVFASFLIMSVSGASFMFALYSSDIKSSLGYDQTTLNLLSFVKDLGSNAGIISGLINEVPPAWVVLLIGAVMNLFGYTMIWLAVTNRIPKPQIWHMCLYICIGANSQTFPNTGTLVTSVINFPESRACVLGLLKGFVGLSGAILSQLFHAFYGNNSKSFILLIAWLPAAISVIFLRFIRIIKDLRQPNELKVFYHILYISLGLAGTLMVLIILQNHLRFQQIQYVGSVIVVIVSLLLPLAIVFREEYSVWKSKIKNPISQLELASKQPRRSH | 294 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 34883102 | 34883986 | + | CePI673135_10g020110.1 | Cec10g2011 | 214926 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cec10g2011 | 294 | Pfam | Nodulin-like | 20 | 265 | IPR010658 | - | |
| Cec10g2011 | 294 | PANTHER | UNCHARACTERIZED NODULIN-LIKE PROTEIN | 20 | 275 | - | GO:0016020(PANTHER) | |
| Cec10g2011 | 294 | SUPERFAMILY | MFS general substrate transporter | 12 | 203 | IPR036259 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cec08g0813 | Cec-Chr8:19977796 | Cec10g2011 | Cec-Chr10:34883102 | 1.20E-89 | dispersed | |
| Cec10g2011 | Cec-Chr10:34883102 | Cec11g0736 | Cec-Chr11:8332973 | 3.70E-36 | dispersed | |
| Cec10g2008 | Cec-Chr10:34857088 | Cec10g2011 | Cec-Chr10:34883102 | 1.20E-139 | proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cec10g2011 | - | - | - | 0.0 |