Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec10g2046 | ATGTTGATCAGGTTGAGAATTTGTGTGTATCTTCAGTGTAAGATTGAGTTATATTTCGGGGACTGGCTAGAGTTTAATAATTTATCCTCTTACGTTTGGAGGGAGAGGAAAGGAAAAGCTCGAGGGACTGATCCGACCAAAATTGAGTTGGGTCGGTTTACGGCATCGCAAAATCGAATATACGTTCATTTGAGTCGGTTTTTCTACTTTGCAAAATTGAACCAGATTGGTGCTGGATATTCACGGAACCACTTTTACTGCCGTACGTCACCGGAAAACCGACCGGGGCGCGGAGGCGAAGAATCAAAGATGAGCGTGATCGACCTTTTGACCAGAGTAGATGCGATTTGCCAGAAGTACGACAAATATGACGTTGAAAAGCAGAGAGATCTCAATGTTTCTGGCGACGATGCCTTCGCTCGACTCTACGCCACTGTCGAAGCTGACATTGAAGCCGCTCTCCAGAAAGCTGAGGATGCTTCTAAAGAGAAGAATAGGGCATCGGTGGTGGCGTTGAATGCGGAGATTCGTCGTACCAAGGCACGATTACTGGAGGAGGTCCCCAAGTTGCAGAGATTGGCTGTAAAGAGGGTTAAAGGGCTATCAACCGAAGATCTTACCACTCGAAATGATCTGGTGCTTGCATTGCCAGAGAGGATTCAAGCTATACCAGATGGAACTGCGACTTCCACGAAGAATAATGGGGGTTGGACATCCTCAGCTTCGCGTGCTGAAATCAAATTTGACTCAGATGGGCGATTCAATGATGAGTACTTCCAACACACTGAGGAGTCAAGTCAGTTCAGGCAAGAGTATGAAATGCGGAAAATGAAGCAGGATCAAGGACTGGACATGATATCAGAAGGGTTAGATACTCTGAAGAACATGGCACATGATATGAATGAGGAAATAGATAGGCAAGTCCCTTTGATGGACGAGATTGACACTAAGGTGGACAAGGCTGCATCTGACCTTAAGAACACCAACGTTAGATTAAAAGACACAGTTAACCAGCTAAGGTCCAGCAGAAATTTCTGTATTGATATCATTCTGTTGTGTATAATCTTGGGGATTGCTGCCTATCTATACAATGTGTTGAAGAAGTGA | 1107 | 44.9 | MLIRLRICVYLQCKIELYFGDWLEFNNLSSYVWRERKGKARGTDPTKIELGRFTASQNRIYVHLSRFFYFAKLNQIGAGYSRNHFYCRTSPENRPGRGGEESKMSVIDLLTRVDAICQKYDKYDVEKQRDLNVSGDDAFARLYATVEADIEAALQKAEDASKEKNRASVVALNAEIRRTKARLLEEVPKLQRLAVKRVKGLSTEDLTTRNDLVLALPERIQAIPDGTATSTKNNGGWTSSASRAEIKFDSDGRFNDEYFQHTEESSQFRQEYEMRKMKQDQGLDMISEGLDTLKNMAHDMNEEIDRQVPLMDEIDTKVDKAASDLKNTNVRLKDTVNQLRSSRNFCIDIILLCIILGIAAYLYNVLKK | 368 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 35202391 | 35206630 | - | CePI673135_10g020460.1 | Cec10g2046 | 214961 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec10g2046 | 368 | SMART | tSNARE_6 | 268 | 335 | IPR000727 | - | |
Cec10g2046 | 368 | Pfam | SNARE domain | 310 | 359 | IPR000727 | - | |
Cec10g2046 | 368 | SUPERFAMILY | SNARE fusion complex | 266 | 333 | - | - | |
Cec10g2046 | 368 | CDD | SNARE_Qc | 278 | 333 | - | - | |
Cec10g2046 | 368 | ProSitePatterns | Syntaxin / epimorphin family signature. | 279 | 318 | IPR006012 | GO:0005484(InterPro)|GO:0006886(InterPro)|GO:0016020(InterPro) | |
Cec10g2046 | 368 | PANTHER | SYNTAXIN | 146 | 353 | IPR045242 | GO:0000149(PANTHER)|GO:0005484(PANTHER)|GO:0006886(PANTHER)|GO:0006906(PANTHER)|GO:0012505(PANTHER)|GO:0016021(PANTHER)|GO:0031201(PANTHER)|GO:0048278(PANTHER) | |
Cec10g2046 | 368 | FunFam | Putative syntaxin-71-like | 273 | 334 | - | - | |
Cec10g2046 | 368 | Coils | Coil | 322 | 342 | - | - | |
Cec10g2046 | 368 | Coils | Coil | 143 | 163 | - | - | |
Cec10g2046 | 368 | Gene3D | - | 273 | 334 | - | - | |
Cec10g2046 | 368 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 273 | 335 | IPR000727 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec10g2046 | Cec-Chr10:35202391 | Cec02g2216 | Cec-Chr2:39590193 | 7.80E-100 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec10g2046 | K08506 | - | csv:101215905 | 494.582 |