Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g2046 ATGTTGATCAGGTTGAGAATTTGTGTGTATCTTCAGTGTAAGATTGAGTTATATTTCGGGGACTGGCTAGAGTTTAATAATTTATCCTCTTACGTTTGGAGGGAGAGGAAAGGAAAAGCTCGAGGGACTGATCCGACCAAAATTGAGTTGGGTCGGTTTACGGCATCGCAAAATCGAATATACGTTCATTTGAGTCGGTTTTTCTACTTTGCAAAATTGAACCAGATTGGTGCTGGATATTCACGGAACCACTTTTACTGCCGTACGTCACCGGAAAACCGACCGGGGCGCGGAGGCGAAGAATCAAAGATGAGCGTGATCGACCTTTTGACCAGAGTAGATGCGATTTGCCAGAAGTACGACAAATATGACGTTGAAAAGCAGAGAGATCTCAATGTTTCTGGCGACGATGCCTTCGCTCGACTCTACGCCACTGTCGAAGCTGACATTGAAGCCGCTCTCCAGAAAGCTGAGGATGCTTCTAAAGAGAAGAATAGGGCATCGGTGGTGGCGTTGAATGCGGAGATTCGTCGTACCAAGGCACGATTACTGGAGGAGGTCCCCAAGTTGCAGAGATTGGCTGTAAAGAGGGTTAAAGGGCTATCAACCGAAGATCTTACCACTCGAAATGATCTGGTGCTTGCATTGCCAGAGAGGATTCAAGCTATACCAGATGGAACTGCGACTTCCACGAAGAATAATGGGGGTTGGACATCCTCAGCTTCGCGTGCTGAAATCAAATTTGACTCAGATGGGCGATTCAATGATGAGTACTTCCAACACACTGAGGAGTCAAGTCAGTTCAGGCAAGAGTATGAAATGCGGAAAATGAAGCAGGATCAAGGACTGGACATGATATCAGAAGGGTTAGATACTCTGAAGAACATGGCACATGATATGAATGAGGAAATAGATAGGCAAGTCCCTTTGATGGACGAGATTGACACTAAGGTGGACAAGGCTGCATCTGACCTTAAGAACACCAACGTTAGATTAAAAGACACAGTTAACCAGCTAAGGTCCAGCAGAAATTTCTGTATTGATATCATTCTGTTGTGTATAATCTTGGGGATTGCTGCCTATCTATACAATGTGTTGAAGAAGTGA 1107 44.9 MLIRLRICVYLQCKIELYFGDWLEFNNLSSYVWRERKGKARGTDPTKIELGRFTASQNRIYVHLSRFFYFAKLNQIGAGYSRNHFYCRTSPENRPGRGGEESKMSVIDLLTRVDAICQKYDKYDVEKQRDLNVSGDDAFARLYATVEADIEAALQKAEDASKEKNRASVVALNAEIRRTKARLLEEVPKLQRLAVKRVKGLSTEDLTTRNDLVLALPERIQAIPDGTATSTKNNGGWTSSASRAEIKFDSDGRFNDEYFQHTEESSQFRQEYEMRKMKQDQGLDMISEGLDTLKNMAHDMNEEIDRQVPLMDEIDTKVDKAASDLKNTNVRLKDTVNQLRSSRNFCIDIILLCIILGIAAYLYNVLKK 368
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 35202391 35206630 - CePI673135_10g020460.1 Cec10g2046 214961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g2046 368 SMART tSNARE_6 268 335 IPR000727 -
Cec10g2046 368 Pfam SNARE domain 310 359 IPR000727 -
Cec10g2046 368 SUPERFAMILY SNARE fusion complex 266 333 - -
Cec10g2046 368 CDD SNARE_Qc 278 333 - -
Cec10g2046 368 ProSitePatterns Syntaxin / epimorphin family signature. 279 318 IPR006012 GO:0005484(InterPro)|GO:0006886(InterPro)|GO:0016020(InterPro)
Cec10g2046 368 PANTHER SYNTAXIN 146 353 IPR045242 GO:0000149(PANTHER)|GO:0005484(PANTHER)|GO:0006886(PANTHER)|GO:0006906(PANTHER)|GO:0012505(PANTHER)|GO:0016021(PANTHER)|GO:0031201(PANTHER)|GO:0048278(PANTHER)
Cec10g2046 368 FunFam Putative syntaxin-71-like 273 334 - -
Cec10g2046 368 Coils Coil 322 342 - -
Cec10g2046 368 Coils Coil 143 163 - -
Cec10g2046 368 Gene3D - 273 334 - -
Cec10g2046 368 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 273 335 IPR000727 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec10g2046 Cec-Chr10:35202391 Cec02g2216 Cec-Chr2:39590193 7.80E-100 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g2046 K08506 - csv:101215905 494.582