Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g2048 ATGGCGGCCAAGAACCATTTGAGCTTTATTCTTCTTGTTGTTCTTTTGCAGCTCTTCTATTCAGGAAGGGGGGAATTGCAAATTAATTATTATGCAAAAAGTTGCCCAAAAGCTGAAGAAATTATAAAACAGCAAGTTGTTGATCTCTACTATGAACATGGAAACACTGCCGTTTCGTGGCTCAGAAATCTCTTCCATGATTGCGTTGTTAAGTCTTGCGATGCATCTCTATTATTGGACACAGTGGTGGGAGTGGAATCAGAGAAAGATTCAGACAGGAGTTTTGGGATGAGAAATTTCAAATATGTAAATAAGATCAAAGCTGCCGTTGAAAAAGAATGTCCTCTCACTGTTTCTTGTGCCGATATTGTTGCATTATCTGCTAGAGATGGCATAGTTATGTTAAAAGGGCCTCATATAGAGTTGAAAACAGGGAGAAGAGACAGCAAAGTGAGTTATTCCAATCTTGTTGAAGAGTTGGTTCCAAAGCACAATGAATCTCTTCTAAATGTTCTCTCCCGCTTTAACTCCATTGGCATTGATACTGAAGCAACCGTCGCTCTTTTAGGAGCCCACTCAGTAGGACGAGTCCACTGTGTAAACTTAGTGGAGAGATTATATCCAACCGTTGATCCAACCATTGATCCAGAATATTCAAAATACTTAAAACTTCGATGCCCAACGCCAAATCCAGATCCAAATGCAGTATTATATTCAAGAAACGACCGTGAAACTCCGATGATTTTGGATAATATGTACTATACTAATATACTCAAACACAAGGGGTTGCTCATAGTGGATCAAGAATTGGCTTCTAATCCTTTAACTTTACCTTATGTCAAGAAATTTGCTGCCGATAATCTCTATTTTCATGCCCAATTCTCTAGGGGAATTCGTTTGTTGTCTGAGAATAATCCCCTCACTGGAGATCAAGGTGAGATTAGGAAAGATTGTCGCTTTGTTAATTAA 969 38.8 MAAKNHLSFILLVVLLQLFYSGRGELQINYYAKSCPKAEEIIKQQVVDLYYEHGNTAVSWLRNLFHDCVVKSCDASLLLDTVVGVESEKDSDRSFGMRNFKYVNKIKAAVEKECPLTVSCADIVALSARDGIVMLKGPHIELKTGRRDSKVSYSNLVEELVPKHNESLLNVLSRFNSIGIDTEATVALLGAHSVGRVHCVNLVERLYPTVDPTIDPEYSKYLKLRCPTPNPDPNAVLYSRNDRETPMILDNMYYTNILKHKGLLIVDQELASNPLTLPYVKKFAADNLYFHAQFSRGIRLLSENNPLTGDQGEIRKDCRFVN 322
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 35220829 35224923 + CePI673135_10g020480.1 Cec10g2048 214963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g2048 322 FunFam Peroxidase 29 172 - -
Cec10g2048 322 Gene3D - 29 322 - -
Cec10g2048 322 PANTHER - 10 322 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec10g2048 322 SUPERFAMILY Heme-dependent peroxidases 25 322 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec10g2048 322 CDD secretory_peroxidase 25 321 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cec10g2048 322 Gene3D Peroxidase, domain 2 162 301 - -
Cec10g2048 322 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec10g2048 322 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec10g2048 322 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec10g2048 322 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec10g2048 322 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec10g2048 322 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec10g2048 322 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec10g2048 322 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec10g2048 322 Pfam Peroxidase 43 286 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec10g2048 322 FunFam Peroxidase 162 301 - -
Cec10g2048 322 ProSiteProfiles Plant heme peroxidase family profile. 25 322 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec10g2048 322 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec10g2048 322 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec10g2048 322 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec10g2048 322 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec10g2048 322 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec10g2048 Cec-Chr10:35220829 Cec04g1691 Cec-Chr4:36042104 6.10E-56 dispersed
Cec03g0455 Cec-Chr3:4895062 Cec10g2048 Cec-Chr10:35220829 6.20E-104 transposed
Cec10g2048 Cec-Chr10:35220829 Cec04g1029 Cec-Chr4:29862361 1.60E-93 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g2048 K00430 - csv:101215428 600.897