Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g2049 ATGTTGAATTTCTCTCCAATTTCCTCATCCATTACCTTCACATTACTTCTTTTTTCCTTTTCCAATACTGGCATTTTAGATTTCACCGCCACCGTTGCCGCCGTTGAATTTGACTTCGGCACTGTCGCCCTCAGTAGTTTAAAGCTACTCGGCGATGCCCACTTGAACAACGGGAGCGTGAGGCTCACTCGAGACCTTGCCGTCCCAAATTCCGGCTCCGGCAGAGTCCTCTACGCCAAACCCATCAGATTCCGGCAGCCAGGGATTAATTACCTCGCCAGTTTCTCCACATTTTTCTCCTTCTCCGTCACTAATCTCAACCCGTCGTCGATCGGTGGTGGTTTGGCGTTTGTGATATCTCCAGACGCCGAAACGCTCGGCGGCGCTGGTGGGTTGTTGGGGTTGGCCGATGAGAGGGGATTGGGGTTCGTGGCGGTGGAATTCGACACGTTAATGGATGTGGAATTTAAAGACATTAATGGAAACCATGTGGGATTGGATCTGAACGAAATGGTTTCGTTAGAGGTTAAAGATCTTGACGGAATTGGAATCGATCTCAAAAGCGGCGATACCGTTAATTCGTGGATTGAATACGACGGGTTGGCTCGGATCTTCAAAATCTTCGTTTCTTATTCGAATTTGAAACCGACAGAACCTCTAATGTCGTTCAATCTCGATCTTGATCCGTATTTGAACGATTTTATGTACGTTGGATTTTCCGGTTCAACACAGGGGAGTACGGAAGTTCACAGTGTGGACTGGTGGAGCTTTACGTCGTCGTTTGACTCAAATTCACCACCTGGGTCGGTTCCGCCGTCGCCAACGACGACGCTGATGAACCCAACGGCGAATGTCGTTCGTTCACCGCCGCCGTCGCAACCGCCATCGGATTCAGATTCCGTCACGCAAAAGAACTCCAAGTCGACGTCCTGCCACAATGGGCTCTGTAAGCAAGGCGCTGGTGCAGTGGTCGGAGTTGTGACCGCGGGGGCTTTTGTTCTAGCACTATTTGCCGGCGGGTTAATTTGGGTATATTCCAAAAAGATCAAGCGGGTTAAAAAATCGGATTCCCTCGCTTCAGAAATCATCAAAATGCCTAAGGAATTCACATACAAGGAGCTCAAAATCGCTACCAAATGCTTCAATTCGAACAGAATCATCGGCCATGGCGCTTTTGGGACTGTTTATAAAGGGATTCTGCCGGAGACCGGCGACATTGTGGCGGTGAAACGGTGTAGCCATAGTACACAAGGGAAAAATGAATTCCTCTCTGAACTTTCAATCATCGGAACTCTCCGCCACCGGAATTTAGTCCGTCTTCAAGGATGGTGTCACGAGAAAGGCGAAATTTTACTCGTTTACGATTTAATGCCAAATGGGAGTTTAGATAAAGCACTATTCGAAGCTAGAACGCCGCTGCCGTGGCCTCACCGGAGAAAAATCCTTCTAGGCGTCGCCTCTGCTTTGGCTTATTTGCATCAAGAATGTGAAAATCAAGTCATTCATAGAGACGTTAAAACCAGCAATATAATGTTGGATGAAGGATTCAATGCCCGATTAGGCGATTTCGGATTGGCCCGACAAGTGGAGCACGATAAATCGCCGGACGCTACCGTCGCCGCCGGTACAATGGGATACTTAGCGCCGGAATATCTCCTCACAGGACGAGCCACGGAAAAAACCGACGTGTTTAGCTTCGGCGCCGTCGTTCTCGAAGTCGCTAGCGGCAGACGGCCGATCGAAAAAGAGACTGCCGCCGTTGGTGGCGGCGGAAAATTCGGTGTCAACAGTAATTTGGTGGACTGGGTTTGGAGTTTACACCGGGAAGGCCGGTTGTTAACGGCGGCAGATGGGAGACTCGGCGGCGAGTTTGAGGAATCCGAGATGAGGAAAGTTTTGTTAGTTGGGTTAGCTTGTTCTCACCCGGATCCGATGACCCGACCCACGATGAGAGGCGTAGTGCAAATGTTAATCGGCGATGCGGAGATTCCGATCGTCCCTCGGTCTAAGCCGTCAACGAGCTTCAGTACTGCTCATTTGCTTCTCACTTTACAAGACAGCGTGTCCGATCTCAACGGCATGATCGCCATTTCCACTTCCTCGTCCGAGCACAGCTTCAAGGGCGAGGATTTAATCTCACTGGATGATCGGACGGCGGGAAATCCATCAATTGTTTGA 2178 49.86 MLNFSPISSSITFTLLLFSFSNTGILDFTATVAAVEFDFGTVALSSLKLLGDAHLNNGSVRLTRDLAVPNSGSGRVLYAKPIRFRQPGINYLASFSTFFSFSVTNLNPSSIGGGLAFVISPDAETLGGAGGLLGLADERGLGFVAVEFDTLMDVEFKDINGNHVGLDLNEMVSLEVKDLDGIGIDLKSGDTVNSWIEYDGLARIFKIFVSYSNLKPTEPLMSFNLDLDPYLNDFMYVGFSGSTQGSTEVHSVDWWSFTSSFDSNSPPGSVPPSPTTTLMNPTANVVRSPPPSQPPSDSDSVTQKNSKSTSCHNGLCKQGAGAVVGVVTAGAFVLALFAGGLIWVYSKKIKRVKKSDSLASEIIKMPKEFTYKELKIATKCFNSNRIIGHGAFGTVYKGILPETGDIVAVKRCSHSTQGKNEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARTPLPWPHRRKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSFGAVVLEVASGRRPIEKETAAVGGGGKFGVNSNLVDWVWSLHREGRLLTAADGRLGGEFEESEMRKVLLVGLACSHPDPMTRPTMRGVVQMLIGDAEIPIVPRSKPSTSFSTAHLLLTLQDSVSDLNGMIAISTSSSEHSFKGEDLISLDDRTAGNPSIV 725
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 35232835 35235012 + CePI673135_10g020490.1 Cec10g2049 214964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g2049 725 CDD lectin_legume_LecRK_Arcelin_ConA 35 261 IPR001220 GO:0030246(InterPro)
Cec10g2049 725 ProSitePatterns Protein kinases ATP-binding region signature. 387 410 IPR017441 GO:0005524(InterPro)
Cec10g2049 725 FunFam L-type lectin-domain containing receptor kinase VIII.1 457 675 - -
Cec10g2049 725 ProSitePatterns Serine/Threonine protein kinases active-site signature. 500 512 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec10g2049 725 ProSitePatterns Legume lectins beta-chain signature. 144 150 IPR019825 -
Cec10g2049 725 FunFam L-type lectin-domain containing receptor kinase VIII.1 345 456 - -
Cec10g2049 725 MobiDBLite consensus disorder prediction 261 307 - -
Cec10g2049 725 ProSiteProfiles Protein kinase domain profile. 381 666 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec10g2049 725 Gene3D Phosphorylase Kinase; domain 1 343 456 - -
Cec10g2049 725 PANTHER - 39 673 IPR050528 GO:0002229(PANTHER)|GO:0005886(PANTHER)
Cec10g2049 725 Pfam Legume lectin domain 36 264 IPR001220 GO:0030246(InterPro)
Cec10g2049 725 Gene3D Transferase(Phosphotransferase) domain 1 457 663 - -
Cec10g2049 725 CDD STKc_IRAK 387 657 - -
Cec10g2049 725 SMART serkin_6 381 657 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec10g2049 725 Pfam Protein kinase domain 382 585 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec10g2049 725 Gene3D - 32 269 - -
Cec10g2049 725 SUPERFAMILY Protein kinase-like (PK-like) 363 687 IPR011009 -
Cec10g2049 725 FunFam L-type lectin-domain containing receptor kinase VIII.1 33 270 - -
Cec10g2049 725 SUPERFAMILY Concanavalin A-like lectins/glucanases 34 268 IPR013320 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec10g0438 Cec-Chr10:5255460 Cec10g2049 Cec-Chr10:35232835 5.10E-174 dispersed
Cec10g0822 Cec-Chr10:15354433 Cec10g2049 Cec-Chr10:35232835 1.40E-110 dispersed
Cec10g1779 Cec-Chr10:32526705 Cec10g2049 Cec-Chr10:35232835 5.60E-96 dispersed
Cec10g2049 Cec-Chr10:35232835 Cec10g2237 Cec-Chr10:36715447 1.10E-97 dispersed
Cec10g2049 Cec-Chr10:35232835 Cec10g2138 Cec-Chr10:35927231 1.10E-110 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72345 PF00069 Pkinase 5.60E-50 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g2049 - - - 0.0