Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g2066 ATGGACGCCAAGCTTCTGCTTCTGCTTCTTCTCTTTCTGTTGGACGTCTCCTTTGCTCAGATGCCAGGTTTTGTGAGTTTGGACTGTGGAGGTCAAGAAAGTTTCACTGATGATATTGGTCTGGAGTGGGTTCCAGATACTCAAGTTCGTTTTGGAGAAGCAATTAACATTTCTGTTGCAAATGAGACAAGGAAGCAATATATGACTTTAAGACATTTTCCTGCTGATTCCAGGAAGTACTGTTACTCACTCAATGTCACTAGTAGAACACGTTACCTTCTCAGAGCAACATTTTTATATGGCAACTTCGACAATAACAACGTGTATCCAAAATTTGACATTTCCCTTGGGGCAACTCACTGGGCAACAATTGTCATATCTGACGCCAACACTATCGAGGTTCGAGAGCTCATATTTCTGGCTTCAACTCCTACTGTAAGCGTTTGTTTGTCAAATGCTACAACAGGACAGCCATTCATATCCACGCTTGAGCTTCGGCAATTTAATGGCTCTATCTACTATACTGAATTTGAGGATCAGTTTTACCTGAGTGTCTCAGCAAGGATTAATTTTGGAGCAGATTCCGAAGCTCCAGTAAGGTATCCTGATGATCCATTTGACCGGATATGGGAGTCGGACTCTGTGAGAAAAGCAAATTACCTTGTTGATGTTGCTGCTGGTACAGAAAAAGTTTCCACTAAATTACCGATAGATGTAGATAGAGATGAAAGACCACCTCAAAAAGTAATGCAGACAGCTGTAGTTGGCAGAAATGGTTCATTAACTTACCGGTTAAATTTGGATGGTTTTCCTGGCTTTGGATGGGCAGTCACCTACTTTGCAGAAATTGAAGACTTGGGTCCAACTGATACAAGAAAATTCAGGCTTGTACTTCCCGGAATGCCTGATATCAGCAAAGCTGTAGTCAACATTGAAGAAAATGCTCAAGGAAAATATCGGCTTTACGAGCCTGGTTTTACCAACTTAACCTTGCCTTTTGTATTATCTTTTCGGTTTGGGAAAACATCAGATTCTTCATTGGGACCTCTGTTAAATGCTATGGAGATTAACAAGTATCTTGAAAAAAGTGATGGTTCTCTAGATGGAGCAGTTGTTGCTAGTGTAATTTCAAAATTTTCATCTTCATATTGGGATGAAGGTGGTGATCCATGCATGCCAGTTCCTTGGTCATGGTTGCAATGTAACTCTGATCCACGGCCAAGAATAGTTAAAATTTCATTGTCCAAAAAGAATTTGACGGGGAACATTCCTACAGACCTTGCAAAGCTGAGCGGTTTAGTTGAATTATGGCTTGATGGAAATTCATTTGTTGGTCCTATACCCGATTTTACTGGATGCGTGGACTTGAAAATCCTCCATCTTGAGAACAACCAGTTGACTGGAGAGCTACCTTCCTCTTTAGCAAATCTACCAAATTTACGGGAGCTGTATGTGCAGAATAACATGTTATCTGGAACAGTGCCCTCTGGTCTTCTCAATAAAAACCTAGTTTTTGACTACTCTAGAAACATTAATCTTCACGAAGGGGGAAAAAAAAACCACGTTTATATCATTGTGGGTTCAGTAATTGGTGCTGTTGTCCTGCTGTTGGCTACTGTGGTATCTTGCTACTTCTTGCAAAAAGGAAGAAAACGATATCGTGAACAAGATCTACTTGAAGAATCATCCTTGCCTGTACAAAGATTTGCCTCTTCAAAGGGTGATGCCCCCAAGGAAACCGCACATTGCTTCAGTGTTATTGAAATTGTAGAAGCAACAAGAGATTTTGAAAGAAAAATTGGGTCTGGAGGTTTTGGTGTTGTATACTACGGGAAATTAAATGACGGAAAAGAAATTGCAGTTAAAGTTTTGACTAGTAATTCTTTTCAGGGAAGACGAGAATTTGCAAACGAGGTGACTCTTCTTTCAAGGATTCATCACAGAAATCTTGTACAATTTCTGGGATATTCTCAAGAACAGGACAGAAGTATGCTTGTCTATGAGTTCATGCATAATGGAACTCTCAAAGAACATCTTTATGGTCCACTAACACGGGAAAAAACTATCAGTTGGATAAAGCGCCTCGAGATTGCTGAGGATGCTGCTAGAGGGATTGAGTACCTTCATACAGGCTGTATTCCAGCAATTATTCATAGGGACTTGAAAAGCAGTAATATTCTTCTTGACAGGCACATGAAAGCAAAGGTTTCAGACTTTGGTCTCTCGAAGCTTGCGGTGGATGGCGCCTCCCATGTGTCCAGCATCGTTCGGGGAACTGTAGGATATTTGGACCCAGAGTATTATATCTCTCAGCAGTTAACAGACAAGAGCGATGTATATAGTTTTGGTGTTATTCTTCTCGAGTTGATATCTGGTCAAGAAGCTATATCTAATGTAAACTTTGGTGTTAATTGCCGCAACATCGTCCAGTGGGCAAAATTACACATTGAGAGCGGGGACATTCAAGGGATCATCGATCCGTCGCTGCACAATGAATATGACATTCAATCAATGTGGAAAATCGCAGAGAAAGCGTTGATGTGTGTCCAGCCACATGGGCACCTTAGGCCATCCATATCTGAAGTGCTGAAGGAGATACAGGATTCAATTTTGATTGAAAGGGAAGCTACTGCAACTAGAGAAGGTAACTCTGATGACATGTCTAGAAACTCAGTCCATTCCATGAATATGGGATCTCTTGATTTGTGTGGAAACGAAAACTACGTGTCGTTTGACGAGTCCATTGCTCGACCTACTGCAAGGTTCGATTTCGTTGAATTTAACTCTCAAACTTATATTTTGAAGCCTGATTGTGATGATCTTGTCAATGCCTTTAACCATGAGAAATGTGATTTGTCTGATTTGAGTAGCTTGGTGGAGGAGATTGTCTCCTTGTTTGAGGTTGCCCGTATTGTGTCCTTAGCATAG 2928 40.92 MDAKLLLLLLLFLLDVSFAQMPGFVSLDCGGQESFTDDIGLEWVPDTQVRFGEAINISVANETRKQYMTLRHFPADSRKYCYSLNVTSRTRYLLRATFLYGNFDNNNVYPKFDISLGATHWATIVISDANTIEVRELIFLASTPTVSVCLSNATTGQPFISTLELRQFNGSIYYTEFEDQFYLSVSARINFGADSEAPVRYPDDPFDRIWESDSVRKANYLVDVAAGTEKVSTKLPIDVDRDERPPQKVMQTAVVGRNGSLTYRLNLDGFPGFGWAVTYFAEIEDLGPTDTRKFRLVLPGMPDISKAVVNIEENAQGKYRLYEPGFTNLTLPFVLSFRFGKTSDSSLGPLLNAMEINKYLEKSDGSLDGAVVASVISKFSSSYWDEGGDPCMPVPWSWLQCNSDPRPRIVKISLSKKNLTGNIPTDLAKLSGLVELWLDGNSFVGPIPDFTGCVDLKILHLENNQLTGELPSSLANLPNLRELYVQNNMLSGTVPSGLLNKNLVFDYSRNINLHEGGKKNHVYIIVGSVIGAVVLLLATVVSCYFLQKGRKRYREQDLLEESSLPVQRFASSKGDAPKETAHCFSVIEIVEATRDFERKIGSGGFGVVYYGKLNDGKEIAVKVLTSNSFQGRREFANEVTLLSRIHHRNLVQFLGYSQEQDRSMLVYEFMHNGTLKEHLYGPLTREKTISWIKRLEIAEDAARGIEYLHTGCIPAIIHRDLKSSNILLDRHMKAKVSDFGLSKLAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNVNFGVNCRNIVQWAKLHIESGDIQGIIDPSLHNEYDIQSMWKIAEKALMCVQPHGHLRPSISEVLKEIQDSILIEREATATREGNSDDMSRNSVHSMNMGSLDLCGNENYVSFDESIARPTARFDFVEFNSQTYILKPDCDDLVNAFNHEKCDLSDLSSLVEEIVSLFEVARIVSLA 975
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 35385036 35393954 - CePI673135_10g020660.1 Cec10g2066 214981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g2066 975 CDD STKc_IRAK 600 867 - -
Cec10g2066 975 Gene3D Ribonuclease Inhibitor 372 518 IPR032675 -
Cec10g2066 975 ProSitePatterns Serine/Threonine protein kinases active-site signature. 716 728 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec10g2066 975 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 670 879 - -
Cec10g2066 975 FunFam Leucine-rich repeat receptor-like protein kinase 571 669 - -
Cec10g2066 975 Pfam Protein kinase domain 597 864 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec10g2066 975 Gene3D Transferase(Phosphotransferase) domain 1 670 892 - -
Cec10g2066 975 Pfam Malectin-like domain 27 357 IPR024788 -
Cec10g2066 975 PANTHER OS07G0107800 PROTEIN-RELATED 453 874 - -
Cec10g2066 975 Pfam Leucine Rich repeats (2 copies) 456 490 IPR025875 -
Cec10g2066 975 SUPERFAMILY L domain-like 393 500 - -
Cec10g2066 975 FunFam Leucine-rich repeat protein kinase family protein 369 519 - -
Cec10g2066 975 SMART serkin_6 594 871 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec10g2066 975 SUPERFAMILY Protein kinase-like (PK-like) 581 864 IPR011009 -
Cec10g2066 975 Gene3D Phosphorylase Kinase; domain 1 569 669 - -
Cec10g2066 975 ProSitePatterns Protein kinases ATP-binding region signature. 600 622 IPR017441 GO:0005524(InterPro)
Cec10g2066 975 ProSiteProfiles Protein kinase domain profile. 594 871 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g2853 Cec-Chr5:38745232 Cec10g2066 Cec-Chr10:35385036 3.20E-243 dispersed
Cec06g0157 Cec-Chr6:1597080 Cec10g2066 Cec-Chr10:35385036 5.20E-108 dispersed
Cec09g0028 Cec-Chr9:278119 Cec10g2066 Cec-Chr10:35385036 2.00E-102 dispersed
Cec09g0887 Cec-Chr9:8372045 Cec10g2066 Cec-Chr10:35385036 1.80E-97 dispersed
Cec10g2066 Cec-Chr10:35385036 Cec11g1886 Cec-Chr11:33090248 7.70E-70 dispersed
Cec10g2066 Cec-Chr10:35385036 Cec10g2072 Cec-Chr10:35445360 5.00E-61 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72346 PF12819 Malectin_like 1.80E-77 CL0202 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g2066 - - - 0.0