Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g2073 ATGGCGTCCCCCTACGTGGAAGAAATTCCACCTCCGTCGTTGGATGCCACCGCCGAACAACCTCCCCTGTTTGATGGAACTACCAGGTTGTATACTGCTTACATTTGCCCTTATGCACACCGTGTTTGGATCATCCGGAATTACAAGGGACTACAACATAAAATAAAGCTTGTTCCTCTCAATCTTATTAATAGGCCTGACTGGTATAAGGAGAAAGTGTACCCTATGAACAAGGTGCCATCTCTGGAACATAATGGAAAAGTTATCGGAGAAAGCCTTGATCTGCTCAAATATATTGATAGCAACTTTGAAGGACCTTCTCTTCTCCCAGATCCTGCTAAAAGAGAGTATGCCGAAGAGTTGCTATCCTACGGCGAAACGTTTAACGGCGCAATAATCGAATCGTTTAAAGGTGACACCGCTAAGGAAGCAGGTGCTCAATTTGATTACTTGGAAAATGCTTTGGGAAAATTTGATGGCCCGTTCCTCCTTGGAGAAATCAGCCAGGTGGATATAGCATACATTCCATCTGTTGAAAGGTTCCACATTTTCTTATTAGAGGCTCTCAAAATTGACATCACAGAAGGAAGGCCTAAATTACTTGCCTGGATTGAGGAGTTCAATAAGATTGATGCGTACAAGCAAACAAAAGTTGATCCCAAGTTGGTCGTTGAAATTTATTCAATGCGATTCTTGAGAGAGAAAGAGAGAAGGAGAGACCGAAGAAACCGATCTGTTAGCGAAGATCAAGTTCCATTTGGGGATCCTCCATATTCGTTGAGAAAATCACGAAATCTTGCAGACCTTCTCCACCCGCTAATGGCGGAGAGGAGCATTCAAATGCTCCACATTCTCGAGCCGAGAAGGGATGCCTATGGATTTGCTCTGAGACCTCAACACACGCATAGATATAGAGAGCATGCTAACATTTACAAGGAGGAGGAAGAGGAAAGGTGTGATAAGTGGAAGAACTTTCTTGATCAAGTAGCTACATCATTTCAAGTGTGTCCTCTTGAGGAGGCAAATACAAATACACTGCAGGCTGAAACTAGCGAGCACCAAGAAGAGACCGTATCGGGGAGGAGTAGCACAGGGGATGACTCAACTGGCTCAAAATCTGATTCTGTTGACACCACAGATAGTGTTCCTACAAAACTCTTAGAGCCTCCAGTAGAAACACAAAAACGTGTTGTTCAGACTTGGTGTCAAACTAGGCCGTCTCTAAATGCCATTGAGATTATGATGAGCTCTCGTGTTAAAAAGAAGATTATGAAAGATGAAAAGACAAGTAATGGTGGAGATCATCTTCCACTGCTAGAGGAGGCAGAATCTTTAGAAGGAACATCTGTGGCAAACTCTGAAGAGGAAGAAGCTTGCTTCAGTGGAGCACTAAATCGTAGTACATCTGCTACTGGGGCAGAAAGTAGGATGGACGAATCCATTTCTAACAGTGTGAAGCCCTCCGAGAGAGATGGTGTTGTGGGGGATGGAGTTTCTCAAGATCAATTGTTTACATGGAAAGAAGAATTAGAATGCCTTGTTCGTGGGGGGTTGCCAAAAGATCTGAGGGGAGAGGTGTGGCAAGCCTTTGTAGGTGTAAAGACCCGTCGAATTGAGAAATATTACCAGGATTTGTTGGACCAAGAAACTAATTGTAGTGCAGATAACGAGAACAATATCCCATCTGGTGTACCGATAAAATTGAAAAAACAGATTGAGAAGGATATACCACGGACATTTCCTGGTCATCCTGCCCTGGATGAGAATGGTAGAGACTCCTTAAGGCGTTTACTTTTAGCATATGCTCTTCACAATCCCTCTGTTGGTTACTGTCAGGCAATGAATTTCTTTGCGGGCTTGTTGCTACTCCTGATGCCCGAGGAGAATGCCTTTTGGACTTTGGTTGGAATAATAGATGACTATTTTGATGGATATTACACTGAGGAAATGATAGAATCGCAGGTGGACCAGCTTGTTTTTGAGGAATTGATGCGTGAAAGATTTCCTAAATTGGTTAAACATTTGGATTACTTGGGAGTGCAAGTGGCATGGATCACAGGACCTTGGTTCCTTTCCATTTTTGTAAATATGCTTCCGTGGGAGAGTGTACTCCGAGTTTGGGATGTGCTTCTGTTTGAAGGCAACAGAGTCATGCTGTTCCGGACAGCACTTGCATTGATGGAACTATATGGTCCTGCATTAGTTACTACAAAAGATGCAGGGGACGCCATAACTCTGTTACAATCCCTTGCTGGTTCCACATTTGATAGTAGCCAGCTTGTGTTGACTGCTTGCATGGGTTTTCTGACTGTAACTGAAGTAAGACTAGTAGAGTTGAGAGAAAAGCTCCGACCATCTGTGCTAGCTGTAATTGAAGAAAGAACAAAGAAGGGTCGGGTTTGGAAGAATTCCAAAGGGCTAGCTTCCAAGCTTTATAGTTTCAAGCATGATCCTGGATCACCTATGGAGAGGAAAAAGACAGCTGCAGGAGCCAATGTAGGATCCTGTACCCCTAATCTGGATGACTTCCTTAGTGGATTAGCCGGTGATTCAGAAACAGAATCACTCCCAGACCTTCAAGAACAAGTAGTATGGTTGAAGGTTGAGTTGTGCAGGTTGCTGGAGGAAAAAAGATCTGCGGTTCTAAGAGCCGAGGAGCTAGAAACAGCACTTATGGAAATGGTCACCCAAGATAATCGACGACTATTAAGTGCCAGGGTTGAACAACTGGAGATAGAGGTAGCCGAGCTAAAGAAAACTCTAGCAGAGAAGAAAGAACAAGAAGTTGCAATGTTTCAGTTGTTGATGCGTGTTGAGCAAGAGCAAAGAGTAACCGAGGAAGCTAGAATAAACGCCGAGCAAGATGTAGCAGCTCAAAAATATGCTGTTCATATGCTTCAGGATAAATATGAGAAAGCTATGGCTTCACTTGCTGAGATGGAGAAAAGGGTGGTGATGGCCGAATCCATGTTGGAGGCTACATTACAATATGAATCTGGCCAAGTTAAAGCAATGTCATCTCCTGGGTCGCGTAATCAAGGATCTGCACAGGAAAATCAAAGAAAGGTTGGTTTGCTGCCATTTGCACTAGGCTGGCGAGATCGAAACAAGCTTGAATTTCTATTCTCAAATTGGGGCGACTGGCGTAGCTTAGAGGATCTTTCTTTTAGTTTTCTTCACATTAGCAGAATGGAAAGGCTTTTTCTTTGGGTGAAGAACCTTAATTTCAGAGTGAAGTTCCAACAGCTAAGTGACCCGTTCAGGCACCGTCCAGTGCATTCAATCAAGCTTTTGAATCACCTATGGTACTCCTCCTCGTAG 3321 43.63 MASPYVEEIPPPSLDATAEQPPLFDGTTRLYTAYICPYAHRVWIIRNYKGLQHKIKLVPLNLINRPDWYKEKVYPMNKVPSLEHNGKVIGESLDLLKYIDSNFEGPSLLPDPAKREYAEELLSYGETFNGAIIESFKGDTAKEAGAQFDYLENALGKFDGPFLLGEISQVDIAYIPSVERFHIFLLEALKIDITEGRPKLLAWIEEFNKIDAYKQTKVDPKLVVEIYSMRFLREKERRRDRRNRSVSEDQVPFGDPPYSLRKSRNLADLLHPLMAERSIQMLHILEPRRDAYGFALRPQHTHRYREHANIYKEEEEERCDKWKNFLDQVATSFQVCPLEEANTNTLQAETSEHQEETVSGRSSTGDDSTGSKSDSVDTTDSVPTKLLEPPVETQKRVVQTWCQTRPSLNAIEIMMSSRVKKKIMKDEKTSNGGDHLPLLEEAESLEGTSVANSEEEEACFSGALNRSTSATGAESRMDESISNSVKPSERDGVVGDGVSQDQLFTWKEELECLVRGGLPKDLRGEVWQAFVGVKTRRIEKYYQDLLDQETNCSADNENNIPSGVPIKLKKQIEKDIPRTFPGHPALDENGRDSLRRLLLAYALHNPSVGYCQAMNFFAGLLLLLMPEENAFWTLVGIIDDYFDGYYTEEMIESQVDQLVFEELMRERFPKLVKHLDYLGVQVAWITGPWFLSIFVNMLPWESVLRVWDVLLFEGNRVMLFRTALALMELYGPALVTTKDAGDAITLLQSLAGSTFDSSQLVLTACMGFLTVTEVRLVELREKLRPSVLAVIEERTKKGRVWKNSKGLASKLYSFKHDPGSPMERKKTAAGANVGSCTPNLDDFLSGLAGDSETESLPDLQEQVVWLKVELCRLLEEKRSAVLRAEELETALMEMVTQDNRRLLSARVEQLEIEVAELKKTLAEKKEQEVAMFQLLMRVEQEQRVTEEARINAEQDVAAQKYAVHMLQDKYEKAMASLAEMEKRVVMAESMLEATLQYESGQVKAMSSPGSRNQGSAQENQRKVGLLPFALGWRDRNKLEFLFSNWGDWRSLEDLSFSFLHISRMERLFLWVKNLNFRVKFQQLSDPFRHRPVHSIKLLNHLWYSSS 1106
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 35448244 35464130 - CePI673135_10g020730.1 Cec10g2073 214988

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g2073 1106 SFLD Glutathione Transferase (cytosolic) 29 207 IPR040079 -
Cec10g2073 1106 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 651 766 IPR035969 -
Cec10g2073 1106 MobiDBLite consensus disorder prediction 361 382 - -
Cec10g2073 1106 SUPERFAMILY GST C-terminal domain-like 104 231 IPR036282 -
Cec10g2073 1106 Gene3D Glutaredoxin 1 104 - -
Cec10g2073 1106 Pfam Rab-GTPase-TBC domain 521 732 IPR000195 -
Cec10g2073 1106 Pfam Glutathione S-transferase, N-terminal domain 30 106 IPR004045 -
Cec10g2073 1106 Coils Coil 900 927 - -
Cec10g2073 1106 MobiDBLite consensus disorder prediction 1 20 - -
Cec10g2073 1106 MobiDBLite consensus disorder prediction 452 496 - -
Cec10g2073 1106 Gene3D - 645 784 - -
Cec10g2073 1106 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 26 107 IPR004045 -
Cec10g2073 1106 SUPERFAMILY Thioredoxin-like 21 108 IPR036249 -
Cec10g2073 1106 SMART tbc_4 514 738 IPR000195 -
Cec10g2073 1106 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 502 674 IPR035969 -
Cec10g2073 1106 ProSiteProfiles TBC/rab GAP domain profile. 517 714 IPR000195 -
Cec10g2073 1106 PANTHER GLUTATHIONE S-TRANSFERASE L1 1 323 IPR044629 GO:0004364(PANTHER)|GO:0004364(InterPro)|GO:0010731(PANTHER)
Cec10g2073 1106 Coils Coil 935 955 - -
Cec10g2073 1106 Gene3D - 105 234 - -
Cec10g2073 1106 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 534 644 - -
Cec10g2073 1106 MobiDBLite consensus disorder prediction 462 482 - -
Cec10g2073 1106 FunFam Ypt/Rab-GAP domain of gyp1p superfamily protein 546 644 - -
Cec10g2073 1106 MobiDBLite consensus disorder prediction 345 392 - -
Cec10g2073 1106 FunFam TBC1 domain family member 8B 645 785 - -
Cec10g2073 1106 Pfam Glutathione S-transferase, C-terminal domain 146 205 - -
Cec10g2073 1106 Coils Coil 963 990 - -
Cec10g2073 1106 FunFam Glutathione S-transferase L2, chloroplastic 1 104 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g2073 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec10g2073 Cec-Chr10:35448244 Cec10g2075 Cec-Chr10:35473420 8.40E-89 dispersed
Cec10g2073 Cec-Chr10:35448244 Cec10g2074 Cec-Chr10:35464162 1.50E-114 tandem
Cec02g0990 Cec-Chr2:14441961 Cec10g2073 Cec-Chr10:35448244 1.20E-42 transposed
Cec02g1449 Cec-Chr2:31823904 Cec10g2073 Cec-Chr10:35448244 8.30E-222 transposed
Cec04g1038 Cec-Chr4:29935035 Cec10g2073 Cec-Chr10:35448244 2.00E-26 transposed
Cec10g2073 Cec-Chr10:35448244 Cec02g1447 Cec-Chr2:31808412 1.40E-80 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cec09g0586 . 1 209 Glutathione S-transferase Gene Family AT4G02520 57.5 1.4e-64 243.0
Cec09g0584 . 1 210 Glutathione S-transferase Gene Family AT4G02520 59.6 2.4e-64 242.3
Cec09g0585 . 1 209 Glutathione S-transferase Gene Family AT4G02520 55.7 2.5e-58 222.2
Cec09g0584 . 1 211 Glutathione S-transferase Gene Family AT2G02930 60.7 1.2e-65 246.5
Cec09g0586 . 1 210 Glutathione S-transferase Gene Family AT2G02930 57.7 4.0e-64 241.5
Cec09g0585 . 1 210 Glutathione S-transferase Gene Family AT2G02930 56.3 2.3e-59 225.7
Cec09g0586 . 5 206 Glutathione S-transferase Gene Family AT1G02950 53.2 2.5e-60 229.2
Cec09g0584 . 6 215 Glutathione S-transferase Gene Family AT1G02950 55.0 9.4e-60 227.3
Cec09g0585 . 5 206 Glutathione S-transferase Gene Family AT1G02950 51.7 7.2e-52 201.1
Cec09g0584 . 1 211 Glutathione S-transferase Gene Family AT1G02930 58.8 6.7e-64 240.7
Cec09g0586 . 1 210 Glutathione S-transferase Gene Family AT1G02930 54.8 4.1e-61 231.5
Cec09g0585 . 1 210 Glutathione S-transferase Gene Family AT1G02930 52.9 2.3e-56 215.7
Cec09g0584 . 1 211 Glutathione S-transferase Gene Family AT1G02920 60.2 2.7e-65 245.4
Cec09g0586 . 1 210 Glutathione S-transferase Gene Family AT1G02920 55.2 3.7e-62 235.0
Cec09g0585 . 1 210 Glutathione S-transferase Gene Family AT1G02920 54.3 2.5e-58 222.2
Cec09g0586 . 1 215 Glutathione S-transferase Gene Family AT2G47730 57.9 5.7e-68 254.6
Cec09g0584 . 4 215 Glutathione S-transferase Gene Family AT2G47730 58.2 2.0e-65 246.1
Cec09g0585 . 1 214 Glutathione S-transferase Gene Family AT2G47730 55.8 3.9e-61 231.9
Cec09g0587 . 1 214 Glutathione S-transferase Gene Family AT3G62760 57.9 9.8e-74 273.5
Cec09g0584 . 20 215 Glutathione S-transferase Gene Family AT1G49860 51.5 1.7e-48 189.9
Cec04g0897 . 3 214 Glutathione S-transferase Gene Family AT3G09270 53.8 3.2e-64 241.9
Cec04g0888 . 3 213 Glutathione S-transferase Gene Family AT3G09270 52.8 4.7e-63 238.0
Cec04g0899 . 3 212 Glutathione S-transferase Gene Family AT3G09270 52.8 8.0e-55 210.7
Cec05g2664 . 1 130 Glutathione S-transferase Gene Family AT1G74590 53.8 9.2e-38 154.1
Cec07g1154 . 1 214 Glutathione S-transferase Gene Family AT1G78380 71.5 1.8e-88 322.4
Cec07g1156 . 1 216 Glutathione S-transferase Gene Family AT1G78380 69.4 1.0e-86 316.6
Cec07g1155 . 1 217 Glutathione S-transferase Gene Family AT1G78380 66.8 2.9e-81 298.5
Cec01g0865 . 4 221 Glutathione S-transferase Gene Family AT1G78380 56.4 8.1e-68 253.8
Cec07g1154 . 7 214 Glutathione S-transferase Gene Family AT1G78370 65.4 5.3e-80 294.3
Cec07g1156 . 7 214 Glutathione S-transferase Gene Family AT1G78370 62.5 6.8e-75 277.3
Cec07g1155 . 7 216 Glutathione S-transferase Gene Family AT1G78370 57.6 7.7e-71 263.8
Cec01g0865 . 7 220 Glutathione S-transferase Gene Family AT1G78370 54.7 5.4e-64 241.1
Cec07g1154 . 1 214 Glutathione S-transferase Gene Family AT1G78340 65.0 8.3e-81 297.0
Cec07g1156 . 1 216 Glutathione S-transferase Gene Family AT1G78340 63.4 7.7e-79 290.4
Cec07g1155 . 1 217 Glutathione S-transferase Gene Family AT1G78340 59.4 9.8e-74 273.5
Cec01g0865 . 4 218 Glutathione S-transferase Gene Family AT1G78340 54.0 3.5e-63 238.4
Cec07g1154 . 1 216 Glutathione S-transferase Gene Family AT1G78320 53.7 3.8e-61 231.5
Cec07g1154 . 1 218 Glutathione S-transferase Gene Family AT1G17180 70.6 2.4e-91 332.0
Cec07g1156 . 1 219 Glutathione S-transferase Gene Family AT1G17180 63.0 2.0e-82 302.4
Cec07g1155 . 1 220 Glutathione S-transferase Gene Family AT1G17180 61.8 3.8e-81 298.1
Cec01g0865 . 4 224 Glutathione S-transferase Gene Family AT1G17180 55.7 1.6e-68 256.1
Cec07g1154 . 3 217 Glutathione S-transferase Gene Family AT1G17190 59.1 2.4e-75 278.9
Cec07g1156 . 2 217 Glutathione S-transferase Gene Family AT1G17190 56.0 9.3e-72 266.9
Cec07g1155 . 2 218 Glutathione S-transferase Gene Family AT1G17190 54.4 1.9e-69 259.2
Cec07g1154 . 3 214 Glutathione S-transferase Gene Family AT3G43800 59.3 5.1e-73 271.2
Cec07g1156 . 3 214 Glutathione S-transferase Gene Family AT3G43800 56.5 2.6e-69 258.8
Cec07g1155 . 3 212 Glutathione S-transferase Gene Family AT3G43800 52.6 1.7e-65 246.1
Cec07g1154 . 4 218 Glutathione S-transferase Gene Family AT1G53680 58.5 8.0e-71 263.8
Cec07g1156 . 2 219 Glutathione S-transferase Gene Family AT1G53680 56.4 8.3e-68 253.8
Cec01g0865 . 1 224 Glutathione S-transferase Gene Family AT1G53680 53.9 9.4e-64 240.4
Cec02g0038 . 55 221 Glutathione S-transferase Gene Family AT2G02390 68.3 9.9e-62 233.4
Cec05g0261 . 61 217 Glutathione S-transferase Gene Family AT2G02390 51.6 7.1e-44 174.1
Cec02g0038 . 14 224 Glutathione S-transferase Gene Family AT2G02380 64.9 2.8e-76 282.0
Cec05g0261 . 18 217 Glutathione S-transferase Gene Family AT2G02380 54.0 3.8e-57 218.4
Cec07g0880 . 88 327 Glutathione S-transferase Gene Family AT5G41210 67.5 1.1e-92 336.7
Cec07g0880 . 88 332 Glutathione S-transferase Gene Family AT5G41240 64.7 2.0e-89 327.0
Cec10g2074 . 13 232 Glutathione S-transferase Gene Family AT5G02780 68.9 2.5e-83 305.4
Cec10g2075 . 15 228 Glutathione S-transferase Gene Family AT5G02780 66.7 4.8e-82 301.2
Cec02g1447 . 75 294 Glutathione S-transferase Gene Family AT5G02780 65.8 3.4e-80 295.0
Cec10g2073 . 5 232 Glutathione S-transferase Gene Family AT5G02780 62.8 1.9e-75 279.3
Cec02g1447 . 34 292 Glutathione S-transferase Gene Family AT3G55040 61.5 1.1e-85 313.5
Cec10g2074 . 3 230 Glutathione S-transferase Gene Family AT3G55040 59.0 2.6e-77 285.8
Cec10g2075 . 6 226 Glutathione S-transferase Gene Family AT3G55040 60.1 7.4e-77 284.3
Cec10g2073 . 6 230 Glutathione S-transferase Gene Family AT3G55040 55.5 1.8e-70 263.1
Cec10g2074 . 7 232 Glutathione S-transferase Gene Family AT5G02790 69.2 1.8e-89 325.9
Cec10g2075 . 15 228 Glutathione S-transferase Gene Family AT5G02790 69.2 3.7e-87 318.2
Cec10g2073 . 5 232 Glutathione S-transferase Gene Family AT5G02790 65.2 3.3e-83 305.1
Cec02g1447 . 67 294 Glutathione S-transferase Gene Family AT5G02790 62.9 3.6e-82 301.6
Cec02g1423 . 1 212 Glutathione S-transferase Gene Family AT1G19570 66.2 4.7e-81 297.7
Cec05g1315 . 65 272 Glutathione S-transferase Gene Family AT1G19570 58.9 5.3e-72 267.7
Cec11g0974 . 65 272 Glutathione S-transferase Gene Family AT1G19570 58.4 1.5e-71 266.2
Cec02g1423 . 1 211 Glutathione S-transferase Gene Family AT1G75270 70.3 1.7e-86 315.8
Cec05g1315 . 65 272 Glutathione S-transferase Gene Family AT1G75270 61.7 8.7e-75 276.9
Cec11g0974 . 65 272 Glutathione S-transferase Gene Family AT1G75270 61.7 4.3e-74 274.6
Cec05g1315 . 54 272 Glutathione S-transferase Gene Family AT5G16710 77.2 1.3e-101 366.3
Cec11g0974 . 9 272 Glutathione S-transferase Gene Family AT5G16710 67.7 1.1e-100 363.2
Cec02g1423 . 3 210 Glutathione S-transferase Gene Family AT5G16710 59.6 1.7e-72 269.6
Cec11g1651 . 1 267 Glutathione S-transferase Gene Family AT1G77290 70.0 3.6e-110 394.8
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001281 2 4 1 2 2 2 5 2 2 2 2 2 3 2 1 3 2 3 3 2 2 2 3 2 2 2 2 8 2 3 75