Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec10g2079 | ATGGAAGAATTAGAACCCCCCACTGTCATCATGGCCGCTCTCTCCGCCCTCTCTCCGCCGTGTCTCTCCGATCTCTCCCACTCCATTTTCTCCGACATTCACCACCACCGCCGCCGCCTCACCTTCATCCTCTCTTCCCCAACACTCTTCTCCCTCACTCTTCGCCACCTCAATTCCCTCTCCCTCTCCCACAAATCTCTCCTCCTCGCCCGCTTCCTCCTCTCCGCCCTCCGCCGCCTCTCCCGCCCCTTCCAGCCACCATCCAGGCTCCTCCCTTACCACCCTTCCACCGCCACCATCTCCCCTCAAGACCTCGACGCCGCCGTCCTCCTCCTCCTCCTCTGCGAGGTCCGGCAACACAATCCAGCCGCCCTCCGAACTCCGATCACCAAATGGCGTGCGACCCTCTGTAGAATCTACTCCGATTCCCTCTTGACGATCTCAGGTGTCGCCACCGGCGGGGGTGGGGCTTTGATTCCGTTCATTGAGACGGTGGTGAGGTGTTGGAAGTTCGTGGGGTTTGTTGGGAGTTGCGGAGGGAAGGCCCGGAGAGAGGTGGCGGCGTCGCCTGTGGCGGTGGTGGAGCTGCCGTCAGTGGCGGTGGGTGGTGGCGGTGGTGCGGCGGTGGAATGTGTGATTTGTAAAGAGGAGATGAGAGAAGGGAGAGACGCGTGTAAATTGCCTTGTGACCACTTATTCCATTGGCTCTGTATTTTGCCATGGCTGAGGAAAAGGAACACGTGTCCCTGTTGTAGGTTTCAGCTTCCCACTGATGATATTTTCGGAGAGATCCAACGGCTCTGGGAGATCCTCCTCAAAGTGGGTTCCACGATGCGTCCATCTGATGGAGATTAA | 855 | 58.83 | MEELEPPTVIMAALSALSPPCLSDLSHSIFSDIHHHRRRLTFILSSPTLFSLTLRHLNSLSLSHKSLLLARFLLSALRRLSRPFQPPSRLLPYHPSTATISPQDLDAAVLLLLLCEVRQHNPAALRTPITKWRATLCRIYSDSLLTISGVATGGGGALIPFIETVVRCWKFVGFVGSCGGKARREVAASPVAVVELPSVAVGGGGGAAVECVICKEEMREGRDACKLPCDHLFHWLCILPWLRKRNTCPCCRFQLPTDDIFGEIQRLWEILLKVGSTMRPSDGD | 284 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 35495384 | 35496238 | - | CePI673135_10g020790.1 | Cec10g2079 | 214994 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec10g2079 | 284 | SUPERFAMILY | RING/U-box | 204 | 258 | - | - | |
Cec10g2079 | 284 | Pfam | Ring finger domain | 210 | 252 | IPR001841 | - | |
Cec10g2079 | 284 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 181 | 258 | IPR013083 | - | |
Cec10g2079 | 284 | SMART | ring_2 | 211 | 251 | IPR001841 | - | |
Cec10g2079 | 284 | ProSiteProfiles | Zinc finger RING-type profile. | 211 | 252 | IPR001841 | - | |
Cec10g2079 | 284 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE PRAJA | 183 | 257 | - | GO:0005737(PANTHER)|GO:0016567(PANTHER)|GO:0061630(PANTHER) | |
Cec10g2079 | 284 | CDD | RING-H2_PA-TM-RING | 210 | 252 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec10g2079 | Cec-Chr10:35495384 | Cec10g2133 | Cec-Chr10:35904355 | 2.80E-12 | dispersed | |
Cec01g1573 | Cec-Chr1:30316205 | Cec10g2079 | Cec-Chr10:35495384 | 1.50E-11 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec10g2079 | - | - | - | 0.0 |