Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec10g2088 | ATGCCGAGAAAAGGAATGAGGAGTCTCCTTTTCCAGTTCTCGTCGCCGTCGAATTCCATTTCCAGGTATTCCATCTCGTCGCCGTCCAGAACTCCAGCATCGACTCCACGCCGGAGCTTCAACGACGCAATGATCGAACAGAGCATCGAATCTGCCGCGGCGATTGTGATGAAATGGAATCCAGATTCTTCAACGTACGCCAAAGTTACTTCCATGTTCTATGAAGACAAAAGAGAAGCCATGCAGTTCATTAAGCGTGTGAATGATCTTCAAAAAGCGATGCATCTTATTGCTTCGGAAGATTCCGCTTCCGCTTCCGATCGCCTTGTTTACGCTCAAACTTTGATGGAAATCGCCATGAAAAGACTTCAGAAGGAGTTTTATCAGATTCTCTCCATGAATCGTGCTCATCTAGATCCGGAATCTGTTTCCACTAGATCCTCTCGCTGCTCCACCAGATCGAGCACTTCCGTTGATTTCGACGATGACGGAACCCTAGATGATGAAATCCAAGCCATAGACGATTCGATCTCTGAAGTTGAGCAAGTTTCTTTCATTGTAATGGAGGATTTACGAGCCATAGCCGAGTGTATGATCTCCTCTGGCTACGCTAAAGAATGCGTTAATATGTATAAAGTGATTCGAAAATCGATTATCGATGAAGGTGTGTACCGCCTCGGACTTGAGAAATTGAGCGCTTCGAGAATCAATAAAATGGATTGGGAGGTGCTTGATCTTAAAATCAAGAACTGGTTGGATGCAATTAAACTCGCAATTAGAACGTTGTTCGTTGGCGAACGAATTCTCTGTGATCACGTCTTTTCCTCTTCTGAATCCATTAGAGAATCATGTTTTGCTGATATATCTAGAGAAGGCGCTCTGCTTCTGTTTGGATTCCCTGAACTTGTTGCAAGGAGTAAAAAGTCTCCGGAAAAAATGTTCCGTGTTCTTGATATGTACTCATCAATCTCCGAAAATTGGCCGGACATCGAATCGATTTTCTCGTCTGAATCCTCATCTGTAGTTCGATCTCAAGCTCTAACCTCACTCGCGAAACTCGGCGAGTTAGTCCGGGCCATAGTTATGGATCTCGAAGTCTCGATTCAGAAAAACTCATCCAAATCGCCGGTTGCTGGGGGTGGCGTTCATTCCTTAACGCTTCTCTCGATGAACTACCTCACTTTCCTCGCCGATTACGGCAACATTTTGACGGATATTTTCGCTGATTGGACTCCGCCTGAAAAATCCTCTCTCGAACAAATCTTCTTCAACAGTTCAGAATCCGACGATTCTCCAACGGCTTCAGCAATCTCTTTACGAATGGGATGGCTAATTCTAGTCCTCCTCTGCAAACTCGACAGCAAAGCAAAGCGCTACAAAGACGTTTCACTCTCGTATCTGTTCCTCGCTAACAATCTTCAACACATCGTCTCTAAAGTCCGATCGTCGAATCTTCAGTACCTTCTCGGCGACGAGTGGATCACGAAGCAGGAGGCGAAAGTAAGGCAATTCGCGGTGAAGTACGAAGCATTGGCTTGGGGAAGAGTCTTCGATTCTTTGCCGGAGAATCCAACTGAGAGATTCTCACAGGAAGAAGCCAAAGAAATCTTCAGGAATTTCAATATGGCATTCCAAGAAACTCATCGGAAACAGAAATCTTTCTTCATTCCTGATTCAAAGCTTAGAGACGAAGTTAAATTATCAATCGGTAGAAAGCTTGTTTGGTTCTATGGAGAATTTTACAGAGCGCAAAAAGCTTATGCTGGTGGTAATGAAAAGCCGTACATCAGATTCTCCCCGGAAGATATCGGTAACTACCTTTCAGATCTCTATTTTGAACCGTCCGATTGGGCGAGCGTTTCCACCTCGTCGCCGTCGTCCACCTCCTCCTCTCACCGGCGGGAACCGGGACCCCGTTAA | 1920 | 45.36 | MPRKGMRSLLFQFSSPSNSISRYSISSPSRTPASTPRRSFNDAMIEQSIESAAAIVMKWNPDSSTYAKVTSMFYEDKREAMQFIKRVNDLQKAMHLIASEDSASASDRLVYAQTLMEIAMKRLQKEFYQILSMNRAHLDPESVSTRSSRCSTRSSTSVDFDDDGTLDDEIQAIDDSISEVEQVSFIVMEDLRAIAECMISSGYAKECVNMYKVIRKSIIDEGVYRLGLEKLSASRINKMDWEVLDLKIKNWLDAIKLAIRTLFVGERILCDHVFSSSESIRESCFADISREGALLLFGFPELVARSKKSPEKMFRVLDMYSSISENWPDIESIFSSESSSVVRSQALTSLAKLGELVRAIVMDLEVSIQKNSSKSPVAGGGVHSLTLLSMNYLTFLADYGNILTDIFADWTPPEKSSLEQIFFNSSESDDSPTASAISLRMGWLILVLLCKLDSKAKRYKDVSLSYLFLANNLQHIVSKVRSSNLQYLLGDEWITKQEAKVRQFAVKYEALAWGRVFDSLPENPTERFSQEEAKEIFRNFNMAFQETHRKQKSFFIPDSKLRDEVKLSIGRKLVWFYGEFYRAQKAYAGGNEKPYIRFSPEDIGNYLSDLYFEPSDWASVSTSSPSSTSSSHRREPGPR | 639 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 35559846 | 35561765 | - | CePI673135_10g020880.1 | Cec10g2088 | 215003 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec10g2088 | 639 | FunFam | Exocyst subunit Exo70 family protein | 66 | 618 | - | - | |
Cec10g2088 | 639 | Pfam | Exocyst complex component Exo70 N-terminal | 49 | 132 | - | - | |
Cec10g2088 | 639 | SUPERFAMILY | Cullin repeat-like | 75 | 611 | IPR016159 | - | |
Cec10g2088 | 639 | Pfam | Exo70 exocyst complex subunit C-terminal | 249 | 609 | IPR046364 | GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro) | |
Cec10g2088 | 639 | MobiDBLite | consensus disorder prediction | 617 | 639 | - | - | |
Cec10g2088 | 639 | Gene3D | Exocyst complex component Exo70 | 56 | 617 | - | - | |
Cec10g2088 | 639 | PANTHER | EXOCYST COMPLEX PROTEIN EXO70 | 47 | 612 | IPR004140 | GO:0000145(InterPro)|GO:0000145(PANTHER)|GO:0006887(InterPro)|GO:0006887(PANTHER) | |
Cec10g2088 | 639 | MobiDBLite | consensus disorder prediction | 18 | 38 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec03g0196 | Cec-Chr3:2030574 | Cec10g2088 | Cec-Chr10:35559846 | 4.30E-162 | dispersed | |
Cec01g0878 | Cec-Chr1:10145292 | Cec10g2088 | Cec-Chr10:35559846 | 6.70E-71 | transposed | |
Cec10g2088 | Cec-Chr10:35559846 | Cec02g2161 | Cec-Chr2:39048651 | 5.60E-170 | wgd | |
Cec10g2088 | Cec-Chr10:35559846 | Cec02g1430 | Cec-Chr2:31553656 | 2.50E-141 | wgd | |
Cec10g2088 | Cec-Chr10:35559846 | Cec04g0992 | Cec-Chr4:29578521 | 1.90E-141 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec10g2088 | K07195 | - | csv:101208543 | 1098.19 |