Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec10g2099 | ATGCCGACACTAGTGAGTGTTGCAAGGCAATGCTTGATGAAGGAGGCGCCAAAAGGATCTCAGATCCGTAGTTCTTGGGAATACAACCGAAGGCTCTGCTGCTCGCCGCTTGGATTTTTTCTGTCATTTCCTTTTATTCTTGAGTTGTTCTCATCGGATTCTTCATTTTTAGGTTTCAGGAAAGGCGTCGAGGTTTTCTCGAAGTTTAGCATTCGAATTCTCAGGCTATACCGGATTTTTATTTGGAGGAATATATATTGGATGGGAGAAGAAGCAGCTGGTTTGGCTGCAGTTACAAATGAGCCGTTGGGGAAAGAGAGCGCTTCGAGTACCGAATTGAAGCGGGACCATCAGTGTCTTGATGAAGATACGGAACCTGAGTCTTTGCATAACAAGAAGCAAGCAAAAGAAGTGTCGAATGAAGACGTTCTGTCAGAAGTTTCAAATCCCGTAATTTCTCCAAAAGGGAATCATTTCCAAGATATTACTAGCCAACCTGACGAGCTAGAAAATACCAACCAAGTTGAGCGTGGGGAGCTTACGTCGGCTTGTTCGGGGAATTCAAGCTCGGAGGATATCTCAAGCGATGGAATTCGTTGCCAGAATGACGCGTCTCGAAATGACGCTGATATGTGTGATGTTGATGAGGTCTCTCGGTTTGTGATTGAAATTCCTAAGCATGCTAGTTCGACTGGCATTAGGAAGATTACGTTCAAGTTTAGCAAAAAGAAGGACAACAATGGCGCATCGATGTCAGCAGACAAAGTTCATTCTTATGGGAACTCTGACAAGGACGGTAGACCAGAACCTTCATTGGTTGATGATGCTTGTACGGAGACATCTGCACATAGCTGGGAAGGCTGTGCTGAGAGCAGCAGGTATCCTTTAGGTCCAAATAAAATGGAATTGAAAATGTCGAAGAAGGTTTTACCAAACAATTATCCGTCGAATGTTAAAAAGCTGCTGTCGACTGGTATACTTGATGGAGCTCGAGTCAAATATGTATCGACGACAAGCGAGATGAAGCTAAATGGTATTATAAATGGCGGAGGTTACATGTGCGGATGTTCAATATGCAATTATACAGCTATCCTCAGTGCTTATGAGTTTGAGCAGCATGCTGGTTTCAAGACTAGACATCCAAATAATCATATATACTTGGAGAATGGGAGGCCGATTTATAGTGTCATACAGGAAATTAAGAGTGCACCTCTTAGCATATTAGATGAAGTGATTAAGGAAGTGGCGGGTTCATCTGTTAACTTGGATTCATTTGAGGCTTGGAAAGCAAGTTTCCATCAGAACAGTGCAACTATTGAAGTGGAAAATGATGATGTGAAGCTTCCTAAATTGTCACATCCCATTGAGAGAGCAAGCCCTAACTTTTCCAATCCAGTCATTCAACACAAAAAAGCGGCAGAAAAAGGCACAAAAAGAAGGGATAATGATCTTCACAGACTACTTTTCATGCCAAATGGCCTTCCAGATGGGGCCGAGCTGGCATACTTTGTCAAAGGACAGAGAATACTTGGAGGCTACAAGCAAGGAAATGGTATTCTATGTAGTCACTGTAATCGAGAGATTAGCCCTTCCCAGTTTGAAGCCCATGCAGGGATGGCTGCCAGACGTCAACCGTACCGCCACATTTATACTACTAATGGACTTACACTTCATGATATTGCCATTTCCTTGGCTAGTGGGCAAAAACTTACCACAGGAGACAGTGATGATATGTGTGCTGCATGTGGTAATGGAGGAGATTTGATTTTCTGTGATCGCTGCCCTCGAGCTTACCATACAGGCTGCCTGCATCTACAGAATGTTCCTGAAGGAGTTTGGTCTTGCCCAAACTGTAGAGATAAAGTGGGTTCCAGTTCGAAGGTTGCTTCCGGAGGTTCTTTGAGTTTTTCAAAACCAATTGTTTTTAGGTTGACCCGAGTTGTTAAAGCACCCGAGTATGAAATTGGTGGTTGTGTTGTTTGCAGGCGACATGATTTCAGTGCTGCTAAGTTTGATGATCGAACCGTACTGCTTTGTGATCAATGTGAAAGAGAATTCCATGTAGGCTGTCTGCGGGATAGTGGATTATGTGATCTGAAGGAACTCCCCAAGGATAAGTGGTTCTGCTGTGACGAGTGCAGTAATATCCATGTGGCCCTTCAGAACACAGTTCTGAATGGGGCACAGATCATTCCAGATTCATTATCAGATTTAATAATCAGAAAGCATGTTGGAAAGGGATTATTAGTTGATGGAGCTCTGAGTGATGTTCGGTGGCAAATTTTAAGTGGAAAAAGTCGCTATCCAGAAGATCTTCCATTTCTTTCAAGGGCAACTGCTATTTTTCGAGAATGTTTTGATCCTATTGTTGCAAAGTCAGGTCGTGATCTGATACCGGTTATGGTTTATGGGAGAAATATATCTGGACAAGAGTTTGGAGGAATGTATTGTGTTGTTTTAATTGTGAGGTCAATAGTTGTATCGGCTGGTCTTCTTAGGATCTTTGGTCGTGAAGTTGCCGAGCTTCCTATTGTTGCCACAAGTAGAGAACACCAGGGCAAGGGTTATTTCCAAGTATTGTTTTCCTGTATAGAGCAGCTACTTTCTTCCCTAAATGTGCAAAACCTTGTACTCCCGGCAGCCGAGGATGCTGAATCAATTTGGACCAAGAAATTGGGCTTCAGAAAGATGAGTGAAGAACAAGTAATTGATGAAGTACATGAGAGAGGTCCAGCTGACGATCTTCAATGGAACATCGATGCTAGAGAAGGTGGTGCAGCGGCCGACGTTATAACGCTTCATGCTTGGTGTGCATGCCTCTATTGA | 2826 | 43.24 | MPTLVSVARQCLMKEAPKGSQIRSSWEYNRRLCCSPLGFFLSFPFILELFSSDSSFLGFRKGVEVFSKFSIRILRLYRIFIWRNIYWMGEEAAGLAAVTNEPLGKESASSTELKRDHQCLDEDTEPESLHNKKQAKEVSNEDVLSEVSNPVISPKGNHFQDITSQPDELENTNQVERGELTSACSGNSSSEDISSDGIRCQNDASRNDADMCDVDEVSRFVIEIPKHASSTGIRKITFKFSKKKDNNGASMSADKVHSYGNSDKDGRPEPSLVDDACTETSAHSWEGCAESSRYPLGPNKMELKMSKKVLPNNYPSNVKKLLSTGILDGARVKYVSTTSEMKLNGIINGGGYMCGCSICNYTAILSAYEFEQHAGFKTRHPNNHIYLENGRPIYSVIQEIKSAPLSILDEVIKEVAGSSVNLDSFEAWKASFHQNSATIEVENDDVKLPKLSHPIERASPNFSNPVIQHKKAAEKGTKRRDNDLHRLLFMPNGLPDGAELAYFVKGQRILGGYKQGNGILCSHCNREISPSQFEAHAGMAARRQPYRHIYTTNGLTLHDIAISLASGQKLTTGDSDDMCAACGNGGDLIFCDRCPRAYHTGCLHLQNVPEGVWSCPNCRDKVGSSSKVASGGSLSFSKPIVFRLTRVVKAPEYEIGGCVVCRRHDFSAAKFDDRTVLLCDQCEREFHVGCLRDSGLCDLKELPKDKWFCCDECSNIHVALQNTVLNGAQIIPDSLSDLIIRKHVGKGLLVDGALSDVRWQILSGKSRYPEDLPFLSRATAIFRECFDPIVAKSGRDLIPVMVYGRNISGQEFGGMYCVVLIVRSIVVSAGLLRIFGREVAELPIVATSREHQGKGYFQVLFSCIEQLLSSLNVQNLVLPAAEDAESIWTKKLGFRKMSEEQVIDEVHERGPADDLQWNIDAREGGAAADVITLHAWCACLY | 941 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 35648814 | 35658017 | - | CePI673135_10g020990.1 | Cec10g2099 | 215014 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec10g2099 | 941 | ProSitePatterns | Zinc finger PHD-type signature. | 579 | 618 | IPR019786 | - | |
Cec10g2099 | 941 | Pfam | PHD-finger | 579 | 618 | IPR019787 | - | |
Cec10g2099 | 941 | Gene3D | - | 803 | 908 | - | - | |
Cec10g2099 | 941 | ProSiteProfiles | Zinc finger PHD-type profile. | 655 | 716 | IPR019787 | - | |
Cec10g2099 | 941 | SMART | PHD_3 | 657 | 714 | IPR001965 | - | |
Cec10g2099 | 941 | SMART | PHD_3 | 578 | 619 | IPR001965 | - | |
Cec10g2099 | 941 | ProSitePatterns | Zinc finger PHD-type signature. | 658 | 713 | IPR019786 | - | |
Cec10g2099 | 941 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 656 | 716 | IPR013083 | - | |
Cec10g2099 | 941 | ProSiteProfiles | Zinc finger PHD-type profile. | 576 | 621 | IPR019787 | - | |
Cec10g2099 | 941 | MobiDBLite | consensus disorder prediction | 141 | 167 | - | - | |
Cec10g2099 | 941 | SUPERFAMILY | Acyl-CoA N-acyltransferases (Nat) | 813 | 900 | IPR016181 | - | |
Cec10g2099 | 941 | MobiDBLite | consensus disorder prediction | 181 | 202 | - | - | |
Cec10g2099 | 941 | MobiDBLite | consensus disorder prediction | 106 | 167 | - | - | |
Cec10g2099 | 941 | SUPERFAMILY | FYVE/PHD zinc finger | 656 | 711 | IPR011011 | - | |
Cec10g2099 | 941 | PANTHER | AUTOIMMUNE REGULATOR | 114 | 902 | - | GO:0000977(PANTHER)|GO:0003682(PANTHER)|GO:0005634(PANTHER)|GO:0042393(PANTHER)|GO:0045944(PANTHER) | |
Cec10g2099 | 941 | SUPERFAMILY | FYVE/PHD zinc finger | 574 | 621 | IPR011011 | - | |
Cec10g2099 | 941 | Pfam | Tify domain binding domain | 345 | 399 | IPR032308 | - | |
Cec10g2099 | 941 | Pfam | Tify domain binding domain | 512 | 561 | IPR032308 | - | |
Cec10g2099 | 941 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 567 | 638 | IPR013083 | - | |
Cec10g2099 | 941 | MobiDBLite | consensus disorder prediction | 108 | 140 | - | - | |
Cec10g2099 | 941 | MobiDBLite | consensus disorder prediction | 244 | 274 | - | - | |
Cec10g2099 | 941 | MobiDBLite | consensus disorder prediction | 258 | 272 | - | - | |
Cec10g2099 | 941 | MobiDBLite | consensus disorder prediction | 181 | 206 | - | - | |
Cec10g2099 | 941 | FunFam | PHD zinc finger protein | 656 | 716 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec02g2150 | Cec-Chr2:38969402 | Cec10g2099 | Cec-Chr10:35648814 | 5.30E-40 | dispersed | |
Cec02g2279 | Cec-Chr2:40112640 | Cec10g2099 | Cec-Chr10:35648814 | 1.70E-149 | dispersed | |
Cec10g1986 | Cec-Chr10:34643313 | Cec10g2099 | Cec-Chr10:35648814 | 3.50E-139 | dispersed | |
Cec10g2099 | Cec-Chr10:35648814 | Cec07g0355 | Cec-Chr7:3438818 | 2.90E-42 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
30461 | PF16135 | TDBD | 5.80E-12 | No_clan | Cec | TR |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec10g2099 | - | - | - | 0.0 |