Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g2099 ATGCCGACACTAGTGAGTGTTGCAAGGCAATGCTTGATGAAGGAGGCGCCAAAAGGATCTCAGATCCGTAGTTCTTGGGAATACAACCGAAGGCTCTGCTGCTCGCCGCTTGGATTTTTTCTGTCATTTCCTTTTATTCTTGAGTTGTTCTCATCGGATTCTTCATTTTTAGGTTTCAGGAAAGGCGTCGAGGTTTTCTCGAAGTTTAGCATTCGAATTCTCAGGCTATACCGGATTTTTATTTGGAGGAATATATATTGGATGGGAGAAGAAGCAGCTGGTTTGGCTGCAGTTACAAATGAGCCGTTGGGGAAAGAGAGCGCTTCGAGTACCGAATTGAAGCGGGACCATCAGTGTCTTGATGAAGATACGGAACCTGAGTCTTTGCATAACAAGAAGCAAGCAAAAGAAGTGTCGAATGAAGACGTTCTGTCAGAAGTTTCAAATCCCGTAATTTCTCCAAAAGGGAATCATTTCCAAGATATTACTAGCCAACCTGACGAGCTAGAAAATACCAACCAAGTTGAGCGTGGGGAGCTTACGTCGGCTTGTTCGGGGAATTCAAGCTCGGAGGATATCTCAAGCGATGGAATTCGTTGCCAGAATGACGCGTCTCGAAATGACGCTGATATGTGTGATGTTGATGAGGTCTCTCGGTTTGTGATTGAAATTCCTAAGCATGCTAGTTCGACTGGCATTAGGAAGATTACGTTCAAGTTTAGCAAAAAGAAGGACAACAATGGCGCATCGATGTCAGCAGACAAAGTTCATTCTTATGGGAACTCTGACAAGGACGGTAGACCAGAACCTTCATTGGTTGATGATGCTTGTACGGAGACATCTGCACATAGCTGGGAAGGCTGTGCTGAGAGCAGCAGGTATCCTTTAGGTCCAAATAAAATGGAATTGAAAATGTCGAAGAAGGTTTTACCAAACAATTATCCGTCGAATGTTAAAAAGCTGCTGTCGACTGGTATACTTGATGGAGCTCGAGTCAAATATGTATCGACGACAAGCGAGATGAAGCTAAATGGTATTATAAATGGCGGAGGTTACATGTGCGGATGTTCAATATGCAATTATACAGCTATCCTCAGTGCTTATGAGTTTGAGCAGCATGCTGGTTTCAAGACTAGACATCCAAATAATCATATATACTTGGAGAATGGGAGGCCGATTTATAGTGTCATACAGGAAATTAAGAGTGCACCTCTTAGCATATTAGATGAAGTGATTAAGGAAGTGGCGGGTTCATCTGTTAACTTGGATTCATTTGAGGCTTGGAAAGCAAGTTTCCATCAGAACAGTGCAACTATTGAAGTGGAAAATGATGATGTGAAGCTTCCTAAATTGTCACATCCCATTGAGAGAGCAAGCCCTAACTTTTCCAATCCAGTCATTCAACACAAAAAAGCGGCAGAAAAAGGCACAAAAAGAAGGGATAATGATCTTCACAGACTACTTTTCATGCCAAATGGCCTTCCAGATGGGGCCGAGCTGGCATACTTTGTCAAAGGACAGAGAATACTTGGAGGCTACAAGCAAGGAAATGGTATTCTATGTAGTCACTGTAATCGAGAGATTAGCCCTTCCCAGTTTGAAGCCCATGCAGGGATGGCTGCCAGACGTCAACCGTACCGCCACATTTATACTACTAATGGACTTACACTTCATGATATTGCCATTTCCTTGGCTAGTGGGCAAAAACTTACCACAGGAGACAGTGATGATATGTGTGCTGCATGTGGTAATGGAGGAGATTTGATTTTCTGTGATCGCTGCCCTCGAGCTTACCATACAGGCTGCCTGCATCTACAGAATGTTCCTGAAGGAGTTTGGTCTTGCCCAAACTGTAGAGATAAAGTGGGTTCCAGTTCGAAGGTTGCTTCCGGAGGTTCTTTGAGTTTTTCAAAACCAATTGTTTTTAGGTTGACCCGAGTTGTTAAAGCACCCGAGTATGAAATTGGTGGTTGTGTTGTTTGCAGGCGACATGATTTCAGTGCTGCTAAGTTTGATGATCGAACCGTACTGCTTTGTGATCAATGTGAAAGAGAATTCCATGTAGGCTGTCTGCGGGATAGTGGATTATGTGATCTGAAGGAACTCCCCAAGGATAAGTGGTTCTGCTGTGACGAGTGCAGTAATATCCATGTGGCCCTTCAGAACACAGTTCTGAATGGGGCACAGATCATTCCAGATTCATTATCAGATTTAATAATCAGAAAGCATGTTGGAAAGGGATTATTAGTTGATGGAGCTCTGAGTGATGTTCGGTGGCAAATTTTAAGTGGAAAAAGTCGCTATCCAGAAGATCTTCCATTTCTTTCAAGGGCAACTGCTATTTTTCGAGAATGTTTTGATCCTATTGTTGCAAAGTCAGGTCGTGATCTGATACCGGTTATGGTTTATGGGAGAAATATATCTGGACAAGAGTTTGGAGGAATGTATTGTGTTGTTTTAATTGTGAGGTCAATAGTTGTATCGGCTGGTCTTCTTAGGATCTTTGGTCGTGAAGTTGCCGAGCTTCCTATTGTTGCCACAAGTAGAGAACACCAGGGCAAGGGTTATTTCCAAGTATTGTTTTCCTGTATAGAGCAGCTACTTTCTTCCCTAAATGTGCAAAACCTTGTACTCCCGGCAGCCGAGGATGCTGAATCAATTTGGACCAAGAAATTGGGCTTCAGAAAGATGAGTGAAGAACAAGTAATTGATGAAGTACATGAGAGAGGTCCAGCTGACGATCTTCAATGGAACATCGATGCTAGAGAAGGTGGTGCAGCGGCCGACGTTATAACGCTTCATGCTTGGTGTGCATGCCTCTATTGA 2826 43.24 MPTLVSVARQCLMKEAPKGSQIRSSWEYNRRLCCSPLGFFLSFPFILELFSSDSSFLGFRKGVEVFSKFSIRILRLYRIFIWRNIYWMGEEAAGLAAVTNEPLGKESASSTELKRDHQCLDEDTEPESLHNKKQAKEVSNEDVLSEVSNPVISPKGNHFQDITSQPDELENTNQVERGELTSACSGNSSSEDISSDGIRCQNDASRNDADMCDVDEVSRFVIEIPKHASSTGIRKITFKFSKKKDNNGASMSADKVHSYGNSDKDGRPEPSLVDDACTETSAHSWEGCAESSRYPLGPNKMELKMSKKVLPNNYPSNVKKLLSTGILDGARVKYVSTTSEMKLNGIINGGGYMCGCSICNYTAILSAYEFEQHAGFKTRHPNNHIYLENGRPIYSVIQEIKSAPLSILDEVIKEVAGSSVNLDSFEAWKASFHQNSATIEVENDDVKLPKLSHPIERASPNFSNPVIQHKKAAEKGTKRRDNDLHRLLFMPNGLPDGAELAYFVKGQRILGGYKQGNGILCSHCNREISPSQFEAHAGMAARRQPYRHIYTTNGLTLHDIAISLASGQKLTTGDSDDMCAACGNGGDLIFCDRCPRAYHTGCLHLQNVPEGVWSCPNCRDKVGSSSKVASGGSLSFSKPIVFRLTRVVKAPEYEIGGCVVCRRHDFSAAKFDDRTVLLCDQCEREFHVGCLRDSGLCDLKELPKDKWFCCDECSNIHVALQNTVLNGAQIIPDSLSDLIIRKHVGKGLLVDGALSDVRWQILSGKSRYPEDLPFLSRATAIFRECFDPIVAKSGRDLIPVMVYGRNISGQEFGGMYCVVLIVRSIVVSAGLLRIFGREVAELPIVATSREHQGKGYFQVLFSCIEQLLSSLNVQNLVLPAAEDAESIWTKKLGFRKMSEEQVIDEVHERGPADDLQWNIDAREGGAAADVITLHAWCACLY 941
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 35648814 35658017 - CePI673135_10g020990.1 Cec10g2099 215014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g2099 941 ProSitePatterns Zinc finger PHD-type signature. 579 618 IPR019786 -
Cec10g2099 941 Pfam PHD-finger 579 618 IPR019787 -
Cec10g2099 941 Gene3D - 803 908 - -
Cec10g2099 941 ProSiteProfiles Zinc finger PHD-type profile. 655 716 IPR019787 -
Cec10g2099 941 SMART PHD_3 657 714 IPR001965 -
Cec10g2099 941 SMART PHD_3 578 619 IPR001965 -
Cec10g2099 941 ProSitePatterns Zinc finger PHD-type signature. 658 713 IPR019786 -
Cec10g2099 941 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 656 716 IPR013083 -
Cec10g2099 941 ProSiteProfiles Zinc finger PHD-type profile. 576 621 IPR019787 -
Cec10g2099 941 MobiDBLite consensus disorder prediction 141 167 - -
Cec10g2099 941 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 813 900 IPR016181 -
Cec10g2099 941 MobiDBLite consensus disorder prediction 181 202 - -
Cec10g2099 941 MobiDBLite consensus disorder prediction 106 167 - -
Cec10g2099 941 SUPERFAMILY FYVE/PHD zinc finger 656 711 IPR011011 -
Cec10g2099 941 PANTHER AUTOIMMUNE REGULATOR 114 902 - GO:0000977(PANTHER)|GO:0003682(PANTHER)|GO:0005634(PANTHER)|GO:0042393(PANTHER)|GO:0045944(PANTHER)
Cec10g2099 941 SUPERFAMILY FYVE/PHD zinc finger 574 621 IPR011011 -
Cec10g2099 941 Pfam Tify domain binding domain 345 399 IPR032308 -
Cec10g2099 941 Pfam Tify domain binding domain 512 561 IPR032308 -
Cec10g2099 941 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 567 638 IPR013083 -
Cec10g2099 941 MobiDBLite consensus disorder prediction 108 140 - -
Cec10g2099 941 MobiDBLite consensus disorder prediction 244 274 - -
Cec10g2099 941 MobiDBLite consensus disorder prediction 258 272 - -
Cec10g2099 941 MobiDBLite consensus disorder prediction 181 206 - -
Cec10g2099 941 FunFam PHD zinc finger protein 656 716 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g2150 Cec-Chr2:38969402 Cec10g2099 Cec-Chr10:35648814 5.30E-40 dispersed
Cec02g2279 Cec-Chr2:40112640 Cec10g2099 Cec-Chr10:35648814 1.70E-149 dispersed
Cec10g1986 Cec-Chr10:34643313 Cec10g2099 Cec-Chr10:35648814 3.50E-139 dispersed
Cec10g2099 Cec-Chr10:35648814 Cec07g0355 Cec-Chr7:3438818 2.90E-42 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30461 PF16135 TDBD 5.80E-12 No_clan Cec TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g2099 - - - 0.0