Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g2109 ATGAATTTTTCCTCCATTCCTGCTTATCTTGATCCTTCCAACTGGCAACAGCAAGTCACCCATCAAGTGGGAAGCAGTAGTAGCACTGGAGTTAGTTCTCAGCTTCTACCACCTCCGCTGCCGCCGCCTCCACCGCCTCCTCCCCCACCACCCCATGGCGTCGGCGGTGCCAGTTCGATCCGCCCTGGTTCGATGGCCGAGCGAGCTCGAATGGCTAATATTCCGATGCCCGAGGCAGCATTGAAATGCCCAAGATGTGAATCAACCAATACTAAGTTCTGTTACTTCAACAATTACAGCCTCACTCAGCCTCGCCACTTTTGCAAGACTTGTAGAAGGTACTGGACCAGGGGTGGGGCCCTACGGAACGTCCCGGTTGGGGGTGGGTGCCGGAGGAACAAAAGAAGCAAAGGGAGCAGTTCGAAGTCGCCACCGGTCAGCTCGGACCGACAACAAACCAGCGGTTCAGGCAATTCTTCATCAAGTGCAATAGCTTCCAACAACAGTGGAGGCCTTTCCCCACAGATCCCACCACTCGGCCGGTTCATGGCTCCTCTCCATCAACAACTCAGTGACTTCGACATCGGTGGTTTCAGCTATGGCGGTGGCCTCTCAGCTCCTGCCACCGCCACCGGTGACCTGAGTTTCCAATTGGGCAACACTAATTTAGCTGGAGGAACAAGCATTGGATCTCTCTTGGGATTTGACCAACAATGGAGGCTCCAGCAACAACCTCCCCAATTTCCCTTCTTGTCCGGGTTAGACCCTTTCGACGGCGGTAGCAATAGCGGCGGAGAAGGACCCGGACCCGGACCCGGCTGGCAAATGAGGCCAAAATTACCATCAAGTTCAAGGAATGTAAGCCAAATGGGGAATTCAGTGAAAATGGAAGAAACACCAGATCAAGTTAATAATGCTGGAAGACAATTTCTTGGGAATGAACAATATTGGAGCAGTGGATCAATGGCATGGTCAGATCTTTCTGGTTTCAGTTCTTCATCTTCAACAAGAAACCCATTATAG 1023 52.1 MNFSSIPAYLDPSNWQQQVTHQVGSSSSTGVSSQLLPPPLPPPPPPPPPPPHGVGGASSIRPGSMAERARMANIPMPEAALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSKGSSSKSPPVSSDRQQTSGSGNSSSSAIASNNSGGLSPQIPPLGRFMAPLHQQLSDFDIGGFSYGGGLSAPATATGDLSFQLGNTNLAGGTSIGSLLGFDQQWRLQQQPPQFPFLSGLDPFDGGSNSGGEGPGPGPGWQMRPKLPSSSRNVSQMGNSVKMEETPDQVNNAGRQFLGNEQYWSSGSMAWSDLSGFSSSSSTRNPL 340
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 35744102 35745564 - CePI673135_10g021090.1 Cec10g2109 215024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g2109 340 MobiDBLite consensus disorder prediction 16 34 - -
Cec10g2109 340 MobiDBLite consensus disorder prediction 16 61 - -
Cec10g2109 340 ProSiteProfiles Zinc finger Dof-type profile. 81 135 IPR003851 GO:0003677(InterPro)|GO:0006355(InterPro)
Cec10g2109 340 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 68 163 IPR045174 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec10g2109 340 MobiDBLite consensus disorder prediction 122 180 - -
Cec10g2109 340 MobiDBLite consensus disorder prediction 35 55 - -
Cec10g2109 340 MobiDBLite consensus disorder prediction 139 174 - -
Cec10g2109 340 MobiDBLite consensus disorder prediction 279 310 - -
Cec10g2109 340 Pfam Dof domain, zinc finger 80 135 IPR003851 GO:0003677(InterPro)|GO:0006355(InterPro)
Cec10g2109 340 ProSitePatterns Zinc finger Dof-type signature. 83 119 IPR003851 GO:0003677(InterPro)|GO:0006355(InterPro)
Cec10g2109 340 MobiDBLite consensus disorder prediction 250 310 - -
Cec10g2109 340 SUPERFAMILY Formin homology 2 domain (FH2 domain) 41 51 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec09g2096 Cec-Chr9:37920979 Cec10g2109 Cec-Chr10:35744102 1.20E-41 dispersed
Cec10g0819 Cec-Chr10:15005448 Cec10g2109 Cec-Chr10:35744102 5.70E-28 dispersed
Cec10g1611 Cec-Chr10:30548978 Cec10g2109 Cec-Chr10:35744102 4.10E-22 dispersed
Cec10g1843 Cec-Chr10:33267075 Cec10g2109 Cec-Chr10:35744102 3.10E-26 dispersed
Cec10g2109 Cec-Chr10:35744102 Cec02g2134 Cec-Chr2:38881337 1.00E-37 wgd
Cec10g2109 Cec-Chr10:35744102 Cec03g0158 Cec-Chr3:1557615 3.40E-41 wgd
Cec10g2109 Cec-Chr10:35744102 Cec04g0967 Cec-Chr4:29333086 3.50E-38 wgd
Cec10g2109 Cec-Chr10:35744102 Cec07g0366 Cec-Chr7:3608955 5.10E-45 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30462 PF02701 zf-Dof 3.40E-32 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g2109 - - - 0.0