Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g2124 ATGACCCCAGATAAAGAACTTAGAAAGTCGGGACATTGCATAGATAATTGTTCTTTTGGGGTTCAAGCACAAGAGAGCGCTCATGGGAGGCCTAAATTTCAGAATACCATTTTTAGTCATAACTTTCAAGAATTTGATGGCCTTCTCCCCGATCCATCACCAACTAACATAGCCTCAAGTTCCAGTATTATAACCTCCTCTTCTAATGATGCGAGTCATGAGGAAGATTATCTGGAAGATTGCGATTTTTCTGATGCTGTTTTGACATTCATAAATCAGATTCTCATGGAAGAAGACATGGAGGACAAGACTTGCATGCTTCAAGATTCTTTGGATCTTCAAGCCGCTGAGAAATCATTCTATGAGGTCCTTGGAAAAAAATATCCTCCTTCCCCAGAGCCAAATAGATCTCTGGCCGATCAATACAGTGATAGCTTGAATGAAGAACTTTGTGGAGATAGTAGTAATTACCGGAATGGTTACAGTAATACTTCTTATTGTGGTGATGATAACCCTTTTCAAACCGTGAGTGAAGATATACTTCAAATCAGAAGCACTTTAGGTGATACCATTTCTCCATCATCCAATAGTTCCTCAAATAGTATCATTAGCGGGGCTGATGGGTGGGTGGAATTCTCGAATAATACAATTCGAGTTCCTGAGCCTAATAACAGAAGCCAATCTATTTGGCAGTTTCAAAAAGGGTTTGAAGAGGCAAGCAAATTTTTACCTGGTGGAAACAAATTGTGTCTTGATATTGAGGTAAATGGGTCAGCAACTCAGGGTTTGGATGAGGGAACGAGCCAGGTGTATTTGAAGGCAGCAAGAAAGGATCAGAGGAATATTTTGTCACTTGAATCACGCGGAAGAAAGAATCCTCATGATGAGAATGGAGATTTGGAAGAAGAGAGAAGCAGCAAGCAAGCAGCTGTATTTACAGAGTCGACCTTGCGATCTAAGATGTTTGATATTGTGTTGCTTCATAGTGCTGGAGAGGGGCATGAACGGTTAGTTTCATTTCGACAGGAATTACATAATGCTAAAATCAAAAGCATGCTGCAGAGTGGGCAACTAAAAGTGTCTAATGGTGGGAGGGGTCGTCGGAAGAAGCAAAGTGGGAAAAGAGAGGTTGTGGATTTGAGAACTCTTTTAATTAGCTGTGCTCAGGCTGTTGCAGCTGATGACCATAGGAATGCCAGTGAGCTTCTAAAGCAGGTCAGACAACATGCTTCTCCTTTTGGGGATGGAAGCCAGAGGTTGGCTAGTTGTTTTGCTGATGGTCTAGAGGCACGCTTGGCAGGTACTGGTAGCCAGATTTACAAAGGTCTAATTAATAAAAGAACATCTGCTGCTGATGTACTGAAAGCTTACCACTTGTACCTTGCTGCATGTCCATTTAGAAAGATTTCTAATTTTACTTCAAACAGGACTATAATGATTGCTGCTGAGAATGCAACTAAGCTTCATGTCGTAGATTTTGGTATCCTTTACGGTTTCCAGTGGCCTACTTTAATCCAGAGATTGTCATGGAGAAAAGATGGACCTCCAAAGCTTCGAATTACTGGAATAGAATTTCCCCAGCCTGGGTTTCGTCCTGCAGAGAGAGTGGAGGAGACAGGTCGTCGTTTGGCGGCCTATGCAGAGAGTTTCAACGTGCCATTTGAGTATAATGCTATAGCAAAAAAATGGGAAACTATTACGGTCGAAGATCTCAATATCGATCAAGATGAGTTCCTAGTCGTTAACTGTTTGTATCGAGCAAAAAATTTGCTTGATGAGAGTGTCGCCACAGAGAGTGCTAGAAATACTGTTCTTAGATTGATACACAAAATTAGTCCTAACTTATTCATCAGTGGCGTTGTCAATGGAGCATATAATGCTCCTTTCTTTGTTACCCGATTTCGAGAAGCTTTGTTCCATTTTTCTGCTATTTTTGATATGCTTGAAACTGTCGTACCTCGCGAGGATTGGGAGAGAATGCTTTTGGAGAGAGAGATCTTTGGCAGGGAGGCCCTAAATGTTATAGCATGTGAGGGATGGGAGAGAGTGGAAAGACCAGAAACATACAAGCAGTGGCAATTTCGGATCATGAGGGCTGGATTTGTGCAACTGCATTTTCATCCTGAGATTTTTGAGAGAGCAGTTGAAAAGGTACGGTCAAGTTACCACAGAGATTTTCTGATTGATGAAGATAGCAGGTGGATACTGCAAGGATGGAAAGGACCAAGGGTTAACTGTGGTGCTACTGTTTCAAATTTAAAACCTTGTCTTGAGGAAAGCTCCAATGCCCCATGTAATTTATTAGACCGAATCGATGAAACTTCTTCCATCCCCAGATAG 2340 41.67 MTPDKELRKSGHCIDNCSFGVQAQESAHGRPKFQNTIFSHNFQEFDGLLPDPSPTNIASSSSIITSSSNDASHEEDYLEDCDFSDAVLTFINQILMEEDMEDKTCMLQDSLDLQAAEKSFYEVLGKKYPPSPEPNRSLADQYSDSLNEELCGDSSNYRNGYSNTSYCGDDNPFQTVSEDILQIRSTLGDTISPSSNSSSNSIISGADGWVEFSNNTIRVPEPNNRSQSIWQFQKGFEEASKFLPGGNKLCLDIEVNGSATQGLDEGTSQVYLKAARKDQRNILSLESRGRKNPHDENGDLEEERSSKQAAVFTESTLRSKMFDIVLLHSAGEGHERLVSFRQELHNAKIKSMLQSGQLKVSNGGRGRRKKQSGKREVVDLRTLLISCAQAVAADDHRNASELLKQVRQHASPFGDGSQRLASCFADGLEARLAGTGSQIYKGLINKRTSAADVLKAYHLYLAACPFRKISNFTSNRTIMIAAENATKLHVVDFGILYGFQWPTLIQRLSWRKDGPPKLRITGIEFPQPGFRPAERVEETGRRLAAYAESFNVPFEYNAIAKKWETITVEDLNIDQDEFLVVNCLYRAKNLLDESVATESARNTVLRLIHKISPNLFISGVVNGAYNAPFFVTRFREALFHFSAIFDMLETVVPREDWERMLLEREIFGREALNVIACEGWERVERPETYKQWQFRIMRAGFVQLHFHPEIFERAVEKVRSSYHRDFLIDEDSRWILQGWKGPRVNCGATVSNLKPCLEESSNAPCNLLDRIDETSSIPR 779
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 35838549 35841106 + CePI673135_10g021240.1 Cec10g2124 215039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g2124 779 MobiDBLite consensus disorder prediction 53 68 - -
Cec10g2124 779 ProSiteProfiles GRAS family profile. 371 751 IPR005202 -
Cec10g2124 779 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 351 741 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Cec10g2124 779 MobiDBLite consensus disorder prediction 49 68 - -
Cec10g2124 779 MobiDBLite consensus disorder prediction 283 308 - -
Cec10g2124 779 Pfam GRAS domain family 380 742 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0972 Cec-Chr2:13949601 Cec10g2124 Cec-Chr10:35838549 3.10E-57 transposed
Cec04g1245 Cec-Chr4:32034364 Cec10g2124 Cec-Chr10:35838549 7.40E-16 transposed
Cec04g1642 Cec-Chr4:35705724 Cec10g2124 Cec-Chr10:35838549 4.90E-42 transposed
Cec07g1011 Cec-Chr7:24661846 Cec10g2124 Cec-Chr10:35838549 6.50E-43 transposed
Cec07g1187 Cec-Chr7:27259268 Cec10g2124 Cec-Chr10:35838549 6.00E-38 transposed
Cec08g0576 Cec-Chr8:17091061 Cec10g2124 Cec-Chr10:35838549 7.50E-26 transposed
Cec10g0366 Cec-Chr10:4390631 Cec10g2124 Cec-Chr10:35838549 1.60E-34 transposed
Cec10g0383 Cec-Chr10:4619877 Cec10g2124 Cec-Chr10:35838549 6.10E-39 transposed
Cec10g2124 Cec-Chr10:35838549 Cec02g2110 Cec-Chr2:38678140 1.60E-155 wgd
Cec10g2124 Cec-Chr10:35838549 Cec03g0134 Cec-Chr3:1305707 7.10E-151 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30464 PF03514 GRAS 2.70E-111 CL0063 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g2124 K27753 - csv:101205887 1352.42