Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g2156 ATGGCTGAAGGTATTGAATCCTACGACCATGTCCCTCAACAGAGCCGCCGCGACAAGCTCCGGGAACATCCCGACCACCACCGTTCCAATTTCCTCCCTTTTTACGACCCTTCTTCTTCCGACTCCTCCCATCGCTTCCAATTTCATCACCATCCCTTTTTCGACCCCCAAATCCCATCCCCTCTTTTACCCGAAATCCATTCTTTCCCAGCTGAGCCTCTCTCCCTTTCCCTTTCCTCTCACCCCTTTCTCGCTTCCCCTATTCCCTCTCCTCTCCCTCTCGGCCCTTTCACCGGCTACGCTTCCATTTTGAAAGGCTCCAGGTTTCTTAAGCCAGCCCATCACTTGCTACAGGACCTCTGTGATTCTGTTCATTCCTCTTCTTCTTCTCATTCTGCTTTCATCCATGATCCTTCCTCCGATCCCTTCCCCCATTCCCCAATTCTTGACCATCATCCCCTTCCTTCTTCTGATTCTTCTACCCCTTCTCATAAGTCCACCCTTCTTTCAATGCTTGATGAGGTTTACAGGAAATATAAGCAGTACTATCAACAAATCCAGGATGTGATGACATCGTTTGAGTACATCTCTGGGCTCGGGAATGCAGCCCCGTATGCCAACCAGGCTATAAAAGCCATGTACAAGCATTTCAAGTGCTTGAAAAATGCAATTCTAGAGCAACTTCAATTCAATAAAAAGACTCATGGTGACTACAATCAAAGATCCGTTCAGAACCCGGGATTTCTCGACCATCAGCCTGTTTGGCGACCACAACGAGGGCTTCCTGAACGGGCAGTAACTGTTCTTCGTGCTTGGCTGTTTGAACATTTTTTGCATCCTTATCCTTCTGACACAGACAAGCTTATGTTAGCAAAACAGACTGGTCTGTCTCGTAGTCAGGTATCTAACTGGTTCATCAATGCAAGAGTGAGGCTTTGGAAGCCGATGGTTGAAGAAATATACATACTTGAAACCAAGCAGCAAACACAAAAGAATTTACATAGAGAAGAGCGAAATGCCAACAGGGCAAACAATCATCATAATCCATCGAACTCCCTCGCGATGGATAACCCTTCTACATCTGCTCAACAAATTCAAGATACTCCTGCCAAACGTGAACCAAATGACATGCCAATGGGAAATCAAGTTGAGTCCTTGAACGTATCGTACAACTTGTCGAGCCATCCCCATGTAGGCGCAAACACAAACATTGCTGGCAACAACAGCGGTGGAGTTTCCTTAACTCTTGGTCTTCACCAAAATAATGTCATTGGTGGCTTTTCCGAACCCTTCCCAGTAGGGTTCCCTGTTGCAGGTACTCGACGTTTTGGCCTCGGAATCCAAGGTAACAATGATGGGTACGTAATGGGTGGACATTTTAGTAGAGATGTTCTTGGAGGTCAGCTGTTACATGACTTTGTAGGCTGA 1428 46.64 MAEGIESYDHVPQQSRRDKLREHPDHHRSNFLPFYDPSSSDSSHRFQFHHHPFFDPQIPSPLLPEIHSFPAEPLSLSLSSHPFLASPIPSPLPLGPFTGYASILKGSRFLKPAHHLLQDLCDSVHSSSSSHSAFIHDPSSDPFPHSPILDHHPLPSSDSSTPSHKSTLLSMLDEVYRKYKQYYQQIQDVMTSFEYISGLGNAAPYANQAIKAMYKHFKCLKNAILEQLQFNKKTHGDYNQRSVQNPGFLDHQPVWRPQRGLPERAVTVLRAWLFEHFLHPYPSDTDKLMLAKQTGLSRSQVSNWFINARVRLWKPMVEEIYILETKQQTQKNLHREERNANRANNHHNPSNSLAMDNPSTSAQQIQDTPAKREPNDMPMGNQVESLNVSYNLSSHPHVGANTNIAGNNSGGVSLTLGLHQNNVIGGFSEPFPVGFPVAGTRRFGLGIQGNNDGYVMGGHFSRDVLGGQLLHDFVG 475
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 36069655 36072844 - CePI673135_10g021560.1 Cec10g2156 215071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g2156 475 FunFam BEL1-like homeodomain protein 9 258 320 - -
Cec10g2156 475 ProSiteProfiles 'Homeobox' domain profile. 252 315 IPR001356 GO:0003677(InterPro)
Cec10g2156 475 MobiDBLite consensus disorder prediction 1 34 - -
Cec10g2156 475 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 42 358 IPR050224 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0006357(PANTHER)
Cec10g2156 475 MobiDBLite consensus disorder prediction 344 370 - -
Cec10g2156 475 SUPERFAMILY Homeodomain-like 257 321 IPR009057 -
Cec10g2156 475 CDD homeodomain 255 316 IPR001356 GO:0003677(InterPro)
Cec10g2156 475 Gene3D - 258 320 - -
Cec10g2156 475 Coils Coil 326 346 - -
Cec10g2156 475 SMART prehox3 98 226 IPR006563 -
Cec10g2156 475 MobiDBLite consensus disorder prediction 145 165 - -
Cec10g2156 475 SMART HOX_1 255 319 IPR001356 GO:0003677(InterPro)
Cec10g2156 475 Pfam Associated with HOX 103 224 IPR006563 -
Cec10g2156 475 Pfam Homeobox KN domain 272 311 IPR008422 GO:0003677(InterPro)|GO:0006355(InterPro)
Cec10g2156 475 MobiDBLite consensus disorder prediction 10 30 - -
Cec10g2156 475 MobiDBLite consensus disorder prediction 340 382 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec10g1845 Cec-Chr10:33299423 Cec10g2156 Cec-Chr10:36069655 9.30E-49 dispersed
Cec10g2156 Cec-Chr10:36069655 Cec11g0426 Cec-Chr11:4464511 4.80E-49 dispersed
Cec03g0289 Cec-Chr3:3276003 Cec10g2156 Cec-Chr10:36069655 1.90E-63 transposed
Cec10g2156 Cec-Chr10:36069655 Cec04g0909 Cec-Chr4:28829256 2.70E-84 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30465 PF07526 POX 2.20E-29 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g2156 - - - 0.0