Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g2200 ATGGCTTCTTGTTGCTTTGCTATCCTGAATTGCTGTAAAGGAAATAGCAGTCCCGAGGAACCCGCAGAAGGAATTGCTGTTACCAACAATGTACGCCTCTTTTCTTATAATTCACTGAGGTCAGCAACTAGGAATTTTCATCCATCAACCAGGATAGGTGCTGGAGGTTATGGAGTTGTCTACAAAGGAGTTTTAAGGGATGGCACCAATGTTGCAGTCAAATCACTGTCTGCAGAATCAGCTCAGGGAACTCGTGAATTCTTAACCGAGATAAATATGATATCAAATATAAGACATCAACATCTCGTTGAACTGATTGGTTGCTGTGTAGAAGGCACACATCGAATTTTGGTGTATGAATACCTGGAAAACAACAGCCTTGCGAGTACTTTGCTTGGTACAATGAGTAAGCATGTCATTCTGGATTGGCCAAAGAGAGCTAAGATTTGTCTTGGTACAGCTTTGGGTCTTGCATACCTACATGAGGAAGCTGAATATTCTGTTGTTCATAGAGATATCAAGGCTAGCAATATACTTCTTGACAGAAACTTTGATCCTAAAATAGGAGACTTTGGGTTGGCTAAACTTTTCCCAGATAACGTTACTCATGTTAGCACTCGAGTGGCCGGAACTGTTGGATATTTGGCCCCCGAGTATGCACTTTTAGGACAGTTGACAAAGAAGGCAGATGTATACAGTTTTGGTGTGCTCATGCTGGAAATAGTTAGTGGAAGTAGCAGCAGTAAAACAGCATTTGGAGAAGAGTTGTCAATGCTCGTGGAATGGTCTTGGAAATTAAGACAAGAAGGACGGCTTGTAGAACTAATCGATCCGGAACTGGTTGATTATCCGAAGGCTGAGGTGATGCGTTTCATCACAGTTGCACTCTTCTGTACCCAAGCAGCTGCAAATCAAAGGCCAACCATGAAGCAGGTTGTGGAAATGCTTTCAAGAGAGGTACACCTTAATGAAAAACTATTGACAGAGCCAGGAGTATACAAAGGACACAAAACTAGGAAGTTAAATGGTGCTGGTACAAGTTCTGAGGGGACTTCATTCTCCCATGGAGACAGAGGAAATTTTCCCAAGTAG 1092 42.4 MASCCFAILNCCKGNSSPEEPAEGIAVTNNVRLFSYNSLRSATRNFHPSTRIGAGGYGVVYKGVLRDGTNVAVKSLSAESAQGTREFLTEINMISNIRHQHLVELIGCCVEGTHRILVYEYLENNSLASTLLGTMSKHVILDWPKRAKICLGTALGLAYLHEEAEYSVVHRDIKASNILLDRNFDPKIGDFGLAKLFPDNVTHVSTRVAGTVGYLAPEYALLGQLTKKADVYSFGVLMLEIVSGSSSSKTAFGEELSMLVEWSWKLRQEGRLVELIDPELVDYPKAEVMRFITVALFCTQAAANQRPTMKQVVEMLSREVHLNEKLLTEPGVYKGHKTRKLNGAGTSSEGTSFSHGDRGNFPK 363
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 36442751 36446901 - CePI673135_10g022000.1 Cec10g2200 215115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g2200 363 SMART serkin_6 46 316 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec10g2200 363 Pfam Protein tyrosine and serine/threonine kinase 50 316 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec10g2200 363 MobiDBLite consensus disorder prediction 335 363 - -
Cec10g2200 363 Gene3D Phosphorylase Kinase; domain 1 18 121 - -
Cec10g2200 363 FunFam cold-responsive protein kinase 1 17 121 - -
Cec10g2200 363 MobiDBLite consensus disorder prediction 341 355 - -
Cec10g2200 363 FunFam Putative LRR receptor-like serine/threonine-protein kinase 122 328 - -
Cec10g2200 363 CDD STKc_IRAK 52 318 - -
Cec10g2200 363 Gene3D Transferase(Phosphotransferase) domain 1 122 329 - -
Cec10g2200 363 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec10g2200 363 PIRSF ILK 6 326 - -
Cec10g2200 363 ProSitePatterns Protein kinases ATP-binding region signature. 52 74 IPR017441 GO:0005524(InterPro)
Cec10g2200 363 ProSiteProfiles Protein kinase domain profile. 46 322 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec10g2200 363 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 27 349 IPR052059 GO:0004674(PANTHER)|GO:0006468(PANTHER)
Cec10g2200 363 SUPERFAMILY Protein kinase-like (PK-like) 25 316 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0575 Cec-Chr3:6093233 Cec10g2200 Cec-Chr10:36442751 5.90E-114 dispersed
Cec07g1128 Cec-Chr7:26516638 Cec10g2200 Cec-Chr10:36442751 1.60E-90 dispersed
Cec07g1165 Cec-Chr7:27046752 Cec10g2200 Cec-Chr10:36442751 1.90E-92 dispersed
Cec09g0640 Cec-Chr9:5613979 Cec10g2200 Cec-Chr10:36442751 9.50E-74 dispersed
Cec10g2200 Cec-Chr10:36442751 Cec11g1781 Cec-Chr11:32008008 9.20E-93 dispersed
Cec10g2200 Cec-Chr10:36442751 Cec05g0996 Cec-Chr5:8741943 5.20E-59 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72359 PF07714 PK_Tyr_Ser-Thr 1.60E-46 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g2200 - - - 0.0