Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g2202 ATGGCCATAATTTTCCTACCCGATTTAATTCCCCAAACAGCAATCAAATTCACCCTTCCGGCTCTATATTACACCTTCCGACTCCAATCCCTCACAACCACCTACTATCTCTCCGCTATGGCCGCCACCGCATCCTCCTTCATTGGAACTCGTCTTCCTATTGCCCCATCCGGGTCGGGTCGGGTACACGCCAGATTCTCATTCGGCAAACCAAAAAGCGCACCGAAGAAATCGTCAAAAAAGCCCACTTCGGACCGGCCGCTGTGGTACCCGGGGGCCGTGGCGCCGGAGTGGCTGGACGGTAGCTTGGTGGGGGATTACGGGTTCGACCCGTTTGGGCTGGGAAAACCGGCGGAGTACTTGCAGTTCGACTTGGACTCATTGGACCAGAACTTGGCTAAGAATGTGGCTGGTGATGTGATCGGTACTCGGTTCGAGAATGCGGATGTGAAATCGACGCCGTTCCAGCCGTACAGTGAGGTGTTTGGGTTGCAGAGGTTTCGCGAGTGTGAGCTGATCCATGGAAGGTGGGCTATGTTGGCTACACTCGGTGCCCTTACTGTTGAGTGGCTCACTGGTGTCACTTGGCAAGATGCCGGAAAGGTAGAGCTGGTGGAAGGATCCTCATATCTTGGGCAGCCACTTCCATTCTCCATATCAACATTGATATGGATAGAGATTCTAGTAATTGGGTACATTGAGTTTCAAAGGAATGCTGAGCTTGATCCAGAGAAGAGACTTTACCCTGGGGGCAAGTACTTTGATCCCCTTGGCTTAGCGGCCGACCCCGAGAAGAAGGCGACGCTTCAATTGGCCGAGATTAAGCATGCTCGCCTCGCCATGGTTGCGTTCCTCGGTTTTGCTGTTCAAGCTGCTGCCACTGGCAAAGGCCCCCTCAATAACTGGGCAACCCATCTGATCTTCAATTGTTCCGACGCCGTTAAGGAAGAATTCCTCAGGCATTTGGCTCCTCACCGGAAGCTTGCGTTCCTGACCTCCTACTTCACACTTGATATGCATCCATTTGGGGTTACGGTTTCGGATCGTTATGCGAGTGTTGTTCCTATCCGAGGTGCTTCAATGTCTCCCACTTTTAATCCTAGAGCGACTTCTCTGGCAGGACCAGTAACTGGTGACTACGTGCTGGTTGAGAAATTTTGCCTTCAGAAGTATAAATTTTCTCCCGGTGACGTGATTGTTTACCGCTCCCCTTGTAATTACAAGGAGAAACATGTGAAAAGAATTATTGCCTTACCAGGAGATTGGGTTGGAACTCGTCAAACATATGATGTTGTCAAGGTTCCAGAAGGACATTGTTGGGTTGAAGGTGACAATGCAGAATGCAGCATGGACTCGAGATCTTTTGGCCCGATACCAATGGGTTTGATCCAAGGGAGGGTGTCGCATATCGTATGGCCACCTCAAAGAATTGGTGCTGTTGAGAAAAAATATCCTCAGGGGAGAATCAAGTCCAACTAA 1479 50.51 MAIIFLPDLIPQTAIKFTLPALYYTFRLQSLTTTYYLSAMAATASSFIGTRLPIAPSGSGRVHARFSFGKPKSAPKKSSKKPTSDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEILVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLIFNCSDAVKEEFLRHLAPHRKLAFLTSYFTLDMHPFGVTVSDRYASVVPIRGASMSPTFNPRATSLAGPVTGDYVLVEKFCLQKYKFSPGDVIVYRSPCNYKEKHVKRIIALPGDWVGTRQTYDVVKVPEGHCWVEGDNAECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVEKKYPQGRIKSN 492
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 36452102 36458300 - CePI673135_10g022020.1 Cec10g2202 215117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g2202 492 Gene3D Umud Fragment, subunit A 349 486 - -
Cec10g2202 492 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 39 306 IPR001344 GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0009941(PANTHER)|GO:0010287(PANTHER)|GO:0016020(InterPro)
Cec10g2202 492 CDD S26_SPase_I 352 467 IPR019533 GO:0004252(InterPro)|GO:0006465(InterPro)
Cec10g2202 492 Pfam Chlorophyll A-B binding protein 95 291 IPR022796 -
Cec10g2202 492 Gene3D Chlorophyll a/b binding protein domain 90 325 - -
Cec10g2202 492 SUPERFAMILY LexA/Signal peptidase 352 480 IPR036286 -
Cec10g2202 492 FunFam Chlorophyll a-b binding protein, chloroplastic 142 320 - -
Cec10g2202 492 Pfam Signal peptidase, peptidase S26 432 472 IPR019533 GO:0004252(InterPro)|GO:0006465(InterPro)
Cec10g2202 492 Pfam Signal peptidase, peptidase S26 350 426 IPR019533 GO:0004252(InterPro)|GO:0006465(InterPro)
Cec10g2202 492 MobiDBLite consensus disorder prediction 66 88 - -
Cec10g2202 492 SUPERFAMILY Chlorophyll a-b binding protein 82 306 - -
Cec10g2202 492 FunFam Mitochondrial inner membrane protease subunit 347 485 - -
Cec10g2202 492 PRINTS Bacterial leader peptidase 1 (S26A) family signature 434 453 IPR000223 GO:0006508(InterPro)|GO:0008236(InterPro)|GO:0016020(InterPro)
Cec10g2202 492 PRINTS Bacterial leader peptidase 1 (S26A) family signature 349 365 IPR000223 GO:0006508(InterPro)|GO:0008236(InterPro)|GO:0016020(InterPro)
Cec10g2202 492 PRINTS Bacterial leader peptidase 1 (S26A) family signature 411 423 IPR000223 GO:0006508(InterPro)|GO:0008236(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g0849 Cec-Chr4:28229799 Cec10g2202 Cec-Chr10:36452102 3.40E-135 dispersed
Cec10g2202 Cec-Chr10:36452102 Cec11g1417 Cec-Chr11:28360103 8.20E-28 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g2202 K08915 - rcu:8267514 475.707