Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g2206 ATGTTGCAGCAGAACATGGATTTTGAACAAGGAACGTCGATCTTGCAAAACGGCGTCGTCAAGGGTTCGCTGAGGCACGCTCGAACGGCTCACAACATGTCGTCGTCATCGCTTCGTAAAAAGTCCGATTTGAACCTCGTCTCCAAGGTTCGTTTGGGTTGCCTCAGGCAGTTGTTTGTGAATCTTCAGGAGGTCATTTTTGGAACCAGGATTTGGATTCTTTTTCCGGCGGTGCCGTTGGCTGTTTTGGCCGACTCTTTCGGCTTCGCAAGACCATGGGTTTTCGTTCTTAGCTTGCTGGGCCTTGCTCCACTCGCTGAACGCCTTAGCTTTCTGACCGAACAAATCTCACACTTCACCGGCCATACAGTTGGTGGGTTGCTAAATGCGACATGTGGGAATGCGACGGAGTTAATCGTAGCAGTTTTTGCACTTAGCAAGGATAAGATTAAGTTGGTGAAGTATTCTCTTTTGGGATCCGTTCTTTCAAACCTTCTTCTTGTTCTTGGAACCTCACTCTTCCTTGGTGGCATCGTCAATCTTAACAAAGAACAAACCTATGACCGAAGGCAAGCTGAGGTGAACTCGCACATGTTGTTGTTGGCGCTTTTGTGCCATTCCCTCCCGATGTTGTTCCCTTACGCTGGAGGATCGGCTGACGTGGGGGGAGCTGGTTCTCTGCGATTGTCTAGAGCCGGTAGTATAGTAATGCTGGTGGCTTATGTCGCTTACTTGATCTTTCACCTCTGGACTCATCGCCAATTATTTGAAGCAGACAAGGAACTGGACGTATACGACGACGTAGTGGAAGAAGGTCCGGTGATTGGAAAATGGAGCGCAATAGCGTGGTTGGTGGTTGTTACCCTTCTCATTGCTCTGTTATCTGAGTACGTGGTCGCCACAATTGAGGATGCATCAGAAACTTGGGGCTTCTCTGTTGCGTTCCTTGGGATAATCTTGCTACCACTCGTTGGAAATGCAGCTGAGCATGCAGGAGCTGTCATTTTTGCTTACAAGAACAAGTTGGATATAACTTTAGGCGTTGCTTTAGGATCTGCAACTCAAATAGCAATGTTTGTGGTTCCTTTATGTGTAATTGTTGCTTGGGTTTTGGGAATGAAAATGGATCTAAATTTTAATATCCTCGAAACTGCTTCCCTTGCTCTTTCAATATTGGCTTCATCATCCATTTTACAGGATGGTACTTCTCACTACATGAAGGGATTGATTCTCCTCCTCTTCTATCTTGTCATTGCAACATGTTTCTTCCTAATTAATGTCGACGATTTCGGATTCAGATTTGTACGCTCTGTTCAACGTATTTGCTTCATTCCTTTGGTCTTTGGTTGGTGGTTACTCTGGCTTTCTTGCATATCTCCCTGCCTTGTAAGCCATTCAGACTCAGTTCGGTTCGGGACTATGCGGGAAGAAAAGAAGCCAGTAATTGTATGGCGGAATATCGGAAAGCTTGAAGCCTCTGATCGTCGAGTCTTCAACACCACGGACTGTGAACCACTGTGGAATAGCAACAAGCAATTTGGCACCAGTGGTGGTAGTGGTAATGATGGTGATGGAACTAGCTGTAAATTTGCCTGCATTACTGTCGTAGAAAAGCGAAACCGGAAGGAGTTCCTGCCGACGTCGGCTCAGTTGCTTAAGCATCCATTATCAATTCTGGCTTTGGTGCACAGAGAAGCAACGCTCGTCGCCGCTGGCGCCGTATCGGGGGCGGCCGCGAAGACTGCGACAGCTCCGCTTGAGCGAATCAAGCTTCTTATGCAGACTCATGGAGCAAGAATTGCGCAAGAAGGAGCTAAGAAGTCTATTGGCTTTATCGAGGCAATAAGAACAGTAATAAAGGTGGAAGGAGTTAAAGGACTTTGGAAAGGCAACTTTCCTCAGGTTATACGTATCATACCATATAGTGCTATCCAGCTCTTTGCCTATGAAAATATCAAGAACCTTTTCAGGGGAGAAGATGGAGAACTTTCTGTGATTGGAAGACTCGCTGCTGGTGCATGCGCTGGCATGACATCCACCTTCATAACATATCCATTAGATGTTTTGAGGTTGCGTATGGCAGTTGACCCTGGGTTTCGAACGGCATCTGAGATTGCCTTAAGTATGCTACGAGAGGAAGGCATTCAATCTTACTACAGTGGTCTTGGACCATCCCTTTTTGGCATAGCTCCTTACATTGCCGTGAACTTTTGTATTTTTGACTTGGTAAAAAAGTCTTTGCCAGAGGAAGCTCAAAGGAGAACTGAAACATCTTTATTCACAGCCTTGCTTTCGGCTTCCCTGGCTACACTCATGTGCTATCCTTTGGACACTGTGAGAAGACAGATGCAAATGAAGGGTACACCTTACAATACAGTTTTCGATGCTTTTGCAGGTATATGGGCTGGTGATGGATTTGTTGGATTCTACAGGGGCTTGCTGCCCAACTTCTTGAAGAATTTACCAAGCAGCAGCATCAAGCTTACCACATATGACTTTGTCAAGCGTCTTATTGAGACTAGCGAAAATGAGTACCAGAGAATCATTGAGGAAAATCGCGAAAAGCTTAACCAAAATTCGATGGGATGCCAGAACTAG 2598 45.88 MLQQNMDFEQGTSILQNGVVKGSLRHARTAHNMSSSSLRKKSDLNLVSKVRLGCLRQLFVNLQEVIFGTRIWILFPAVPLAVLADSFGFARPWVFVLSLLGLAPLAERLSFLTEQISHFTGHTVGGLLNATCGNATELIVAVFALSKDKIKLVKYSLLGSVLSNLLLVLGTSLFLGGIVNLNKEQTYDRRQAEVNSHMLLLALLCHSLPMLFPYAGGSADVGGAGSLRLSRAGSIVMLVAYVAYLIFHLWTHRQLFEADKELDVYDDVVEEGPVIGKWSAIAWLVVVTLLIALLSEYVVATIEDASETWGFSVAFLGIILLPLVGNAAEHAGAVIFAYKNKLDITLGVALGSATQIAMFVVPLCVIVAWVLGMKMDLNFNILETASLALSILASSSILQDGTSHYMKGLILLLFYLVIATCFFLINVDDFGFRFVRSVQRICFIPLVFGWWLLWLSCISPCLVSHSDSVRFGTMREEKKPVIVWRNIGKLEASDRRVFNTTDCEPLWNSNKQFGTSGGSGNDGDGTSCKFACITVVEKRNRKEFLPTSAQLLKHPLSILALVHREATLVAAGAVSGAAAKTATAPLERIKLLMQTHGARIAQEGAKKSIGFIEAIRTVIKVEGVKGLWKGNFPQVIRIIPYSAIQLFAYENIKNLFRGEDGELSVIGRLAAGACAGMTSTFITYPLDVLRLRMAVDPGFRTASEIALSMLREEGIQSYYSGLGPSLFGIAPYIAVNFCIFDLVKKSLPEEAQRRTETSLFTALLSASLATLMCYPLDTVRRQMQMKGTPYNTVFDAFAGIWAGDGFVGFYRGLLPNFLKNLPSSSIKLTTYDFVKRLIETSENEYQRIIEENREKLNQNSMGCQN 865
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 36470850 36483949 - CePI673135_10g022060.1 Cec10g2206 215121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g2206 865 Pfam Mitochondrial carrier protein 662 749 IPR018108 -
Cec10g2206 865 Pfam Mitochondrial carrier protein 569 658 IPR018108 -
Cec10g2206 865 Pfam Mitochondrial carrier protein 758 840 IPR018108 -
Cec10g2206 865 SUPERFAMILY Mitochondrial carrier 569 834 IPR023395 -
Cec10g2206 865 FunFam Envelope ADP,ATP carrier protein 565 843 - -
Cec10g2206 865 ProSiteProfiles Solute carrier (Solcar) repeat profile. 663 746 IPR018108 -
Cec10g2206 865 Gene3D - 120 261 IPR044880 -
Cec10g2206 865 Gene3D - 264 424 IPR044880 -
Cec10g2206 865 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 20 425 IPR004713 GO:0006812(InterPro)|GO:0006874(PANTHER)|GO:0008324(InterPro)|GO:0009705(PANTHER)|GO:0015369(PANTHER)|GO:0016020(InterPro)|GO:0070588(PANTHER)
Cec10g2206 865 ProSiteProfiles Solute carrier (Solcar) repeat profile. 563 655 IPR018108 -
Cec10g2206 865 ProSiteProfiles Solute carrier (Solcar) repeat profile. 753 837 IPR018108 -
Cec10g2206 865 NCBIfam calcium/proton exchanger 76 423 IPR004798 GO:0006816(InterPro)|GO:0015369(InterPro)
Cec10g2206 865 PRINTS Mitochondrial carrier protein signature 678 696 IPR002067 GO:0055085(InterPro)
Cec10g2206 865 PRINTS Mitochondrial carrier protein signature 568 581 IPR002067 GO:0055085(InterPro)
Cec10g2206 865 PRINTS Mitochondrial carrier protein signature 762 784 IPR002067 GO:0055085(InterPro)
Cec10g2206 865 PRINTS Mitochondrial carrier protein signature 581 595 IPR002067 GO:0055085(InterPro)
Cec10g2206 865 PRINTS Mitochondrial carrier protein signature 719 737 IPR002067 GO:0055085(InterPro)
Cec10g2206 865 PRINTS Mitochondrial carrier protein signature 630 650 IPR002067 GO:0055085(InterPro)
Cec10g2206 865 FunFam Vacuolar cation/proton exchanger 268 424 - -
Cec10g2206 865 Coils Coil 831 858 - -
Cec10g2206 865 Pfam Sodium/calcium exchanger protein 93 249 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
Cec10g2206 865 Pfam Sodium/calcium exchanger protein 280 422 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
Cec10g2206 865 Gene3D Mitochondrial carrier domain 564 842 IPR023395 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec07g0398 Cec-Chr7:4129714 Cec10g2206 Cec-Chr10:36470850 1.80E-37 dispersed
Cec08g1770 Cec-Chr8:28800226 Cec10g2206 Cec-Chr10:36470850 1.60E-38 dispersed
Cec09g0623 Cec-Chr9:5419345 Cec10g2206 Cec-Chr10:36470850 3.90E-15 dispersed
Cec10g0414 Cec-Chr10:4972194 Cec10g2206 Cec-Chr10:36470850 1.40E-91 dispersed
Cec10g2206 Cec-Chr10:36470850 Cec10g2227 Cec-Chr10:36656643 1.70E-15 dispersed
Cec04g0837 Cec-Chr4:28111281 Cec10g2206 Cec-Chr10:36470850 1.20E-144 transposed
Cec10g2206 Cec-Chr10:36470850 Cec03g0075 Cec-Chr3:776777 8.20E-116 wgd
Cec10g2206 Cec-Chr10:36470850 Cec04g0910 Cec-Chr4:28848057 4.20E-35 wgd
Cec10g2206 Cec-Chr10:36470850 Cec04g0836 Cec-Chr4:28101446 4.00E-163 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g2206 K07300 - csv:101213421 672.544