Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec10g2206 | ATGTTGCAGCAGAACATGGATTTTGAACAAGGAACGTCGATCTTGCAAAACGGCGTCGTCAAGGGTTCGCTGAGGCACGCTCGAACGGCTCACAACATGTCGTCGTCATCGCTTCGTAAAAAGTCCGATTTGAACCTCGTCTCCAAGGTTCGTTTGGGTTGCCTCAGGCAGTTGTTTGTGAATCTTCAGGAGGTCATTTTTGGAACCAGGATTTGGATTCTTTTTCCGGCGGTGCCGTTGGCTGTTTTGGCCGACTCTTTCGGCTTCGCAAGACCATGGGTTTTCGTTCTTAGCTTGCTGGGCCTTGCTCCACTCGCTGAACGCCTTAGCTTTCTGACCGAACAAATCTCACACTTCACCGGCCATACAGTTGGTGGGTTGCTAAATGCGACATGTGGGAATGCGACGGAGTTAATCGTAGCAGTTTTTGCACTTAGCAAGGATAAGATTAAGTTGGTGAAGTATTCTCTTTTGGGATCCGTTCTTTCAAACCTTCTTCTTGTTCTTGGAACCTCACTCTTCCTTGGTGGCATCGTCAATCTTAACAAAGAACAAACCTATGACCGAAGGCAAGCTGAGGTGAACTCGCACATGTTGTTGTTGGCGCTTTTGTGCCATTCCCTCCCGATGTTGTTCCCTTACGCTGGAGGATCGGCTGACGTGGGGGGAGCTGGTTCTCTGCGATTGTCTAGAGCCGGTAGTATAGTAATGCTGGTGGCTTATGTCGCTTACTTGATCTTTCACCTCTGGACTCATCGCCAATTATTTGAAGCAGACAAGGAACTGGACGTATACGACGACGTAGTGGAAGAAGGTCCGGTGATTGGAAAATGGAGCGCAATAGCGTGGTTGGTGGTTGTTACCCTTCTCATTGCTCTGTTATCTGAGTACGTGGTCGCCACAATTGAGGATGCATCAGAAACTTGGGGCTTCTCTGTTGCGTTCCTTGGGATAATCTTGCTACCACTCGTTGGAAATGCAGCTGAGCATGCAGGAGCTGTCATTTTTGCTTACAAGAACAAGTTGGATATAACTTTAGGCGTTGCTTTAGGATCTGCAACTCAAATAGCAATGTTTGTGGTTCCTTTATGTGTAATTGTTGCTTGGGTTTTGGGAATGAAAATGGATCTAAATTTTAATATCCTCGAAACTGCTTCCCTTGCTCTTTCAATATTGGCTTCATCATCCATTTTACAGGATGGTACTTCTCACTACATGAAGGGATTGATTCTCCTCCTCTTCTATCTTGTCATTGCAACATGTTTCTTCCTAATTAATGTCGACGATTTCGGATTCAGATTTGTACGCTCTGTTCAACGTATTTGCTTCATTCCTTTGGTCTTTGGTTGGTGGTTACTCTGGCTTTCTTGCATATCTCCCTGCCTTGTAAGCCATTCAGACTCAGTTCGGTTCGGGACTATGCGGGAAGAAAAGAAGCCAGTAATTGTATGGCGGAATATCGGAAAGCTTGAAGCCTCTGATCGTCGAGTCTTCAACACCACGGACTGTGAACCACTGTGGAATAGCAACAAGCAATTTGGCACCAGTGGTGGTAGTGGTAATGATGGTGATGGAACTAGCTGTAAATTTGCCTGCATTACTGTCGTAGAAAAGCGAAACCGGAAGGAGTTCCTGCCGACGTCGGCTCAGTTGCTTAAGCATCCATTATCAATTCTGGCTTTGGTGCACAGAGAAGCAACGCTCGTCGCCGCTGGCGCCGTATCGGGGGCGGCCGCGAAGACTGCGACAGCTCCGCTTGAGCGAATCAAGCTTCTTATGCAGACTCATGGAGCAAGAATTGCGCAAGAAGGAGCTAAGAAGTCTATTGGCTTTATCGAGGCAATAAGAACAGTAATAAAGGTGGAAGGAGTTAAAGGACTTTGGAAAGGCAACTTTCCTCAGGTTATACGTATCATACCATATAGTGCTATCCAGCTCTTTGCCTATGAAAATATCAAGAACCTTTTCAGGGGAGAAGATGGAGAACTTTCTGTGATTGGAAGACTCGCTGCTGGTGCATGCGCTGGCATGACATCCACCTTCATAACATATCCATTAGATGTTTTGAGGTTGCGTATGGCAGTTGACCCTGGGTTTCGAACGGCATCTGAGATTGCCTTAAGTATGCTACGAGAGGAAGGCATTCAATCTTACTACAGTGGTCTTGGACCATCCCTTTTTGGCATAGCTCCTTACATTGCCGTGAACTTTTGTATTTTTGACTTGGTAAAAAAGTCTTTGCCAGAGGAAGCTCAAAGGAGAACTGAAACATCTTTATTCACAGCCTTGCTTTCGGCTTCCCTGGCTACACTCATGTGCTATCCTTTGGACACTGTGAGAAGACAGATGCAAATGAAGGGTACACCTTACAATACAGTTTTCGATGCTTTTGCAGGTATATGGGCTGGTGATGGATTTGTTGGATTCTACAGGGGCTTGCTGCCCAACTTCTTGAAGAATTTACCAAGCAGCAGCATCAAGCTTACCACATATGACTTTGTCAAGCGTCTTATTGAGACTAGCGAAAATGAGTACCAGAGAATCATTGAGGAAAATCGCGAAAAGCTTAACCAAAATTCGATGGGATGCCAGAACTAG | 2598 | 45.88 | MLQQNMDFEQGTSILQNGVVKGSLRHARTAHNMSSSSLRKKSDLNLVSKVRLGCLRQLFVNLQEVIFGTRIWILFPAVPLAVLADSFGFARPWVFVLSLLGLAPLAERLSFLTEQISHFTGHTVGGLLNATCGNATELIVAVFALSKDKIKLVKYSLLGSVLSNLLLVLGTSLFLGGIVNLNKEQTYDRRQAEVNSHMLLLALLCHSLPMLFPYAGGSADVGGAGSLRLSRAGSIVMLVAYVAYLIFHLWTHRQLFEADKELDVYDDVVEEGPVIGKWSAIAWLVVVTLLIALLSEYVVATIEDASETWGFSVAFLGIILLPLVGNAAEHAGAVIFAYKNKLDITLGVALGSATQIAMFVVPLCVIVAWVLGMKMDLNFNILETASLALSILASSSILQDGTSHYMKGLILLLFYLVIATCFFLINVDDFGFRFVRSVQRICFIPLVFGWWLLWLSCISPCLVSHSDSVRFGTMREEKKPVIVWRNIGKLEASDRRVFNTTDCEPLWNSNKQFGTSGGSGNDGDGTSCKFACITVVEKRNRKEFLPTSAQLLKHPLSILALVHREATLVAAGAVSGAAAKTATAPLERIKLLMQTHGARIAQEGAKKSIGFIEAIRTVIKVEGVKGLWKGNFPQVIRIIPYSAIQLFAYENIKNLFRGEDGELSVIGRLAAGACAGMTSTFITYPLDVLRLRMAVDPGFRTASEIALSMLREEGIQSYYSGLGPSLFGIAPYIAVNFCIFDLVKKSLPEEAQRRTETSLFTALLSASLATLMCYPLDTVRRQMQMKGTPYNTVFDAFAGIWAGDGFVGFYRGLLPNFLKNLPSSSIKLTTYDFVKRLIETSENEYQRIIEENREKLNQNSMGCQN | 865 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 36470850 | 36483949 | - | CePI673135_10g022060.1 | Cec10g2206 | 215121 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec10g2206 | 865 | Pfam | Mitochondrial carrier protein | 662 | 749 | IPR018108 | - | |
Cec10g2206 | 865 | Pfam | Mitochondrial carrier protein | 569 | 658 | IPR018108 | - | |
Cec10g2206 | 865 | Pfam | Mitochondrial carrier protein | 758 | 840 | IPR018108 | - | |
Cec10g2206 | 865 | SUPERFAMILY | Mitochondrial carrier | 569 | 834 | IPR023395 | - | |
Cec10g2206 | 865 | FunFam | Envelope ADP,ATP carrier protein | 565 | 843 | - | - | |
Cec10g2206 | 865 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 663 | 746 | IPR018108 | - | |
Cec10g2206 | 865 | Gene3D | - | 120 | 261 | IPR044880 | - | |
Cec10g2206 | 865 | Gene3D | - | 264 | 424 | IPR044880 | - | |
Cec10g2206 | 865 | PANTHER | VACUOLAR CALCIUM ION TRANSPORTER | 20 | 425 | IPR004713 | GO:0006812(InterPro)|GO:0006874(PANTHER)|GO:0008324(InterPro)|GO:0009705(PANTHER)|GO:0015369(PANTHER)|GO:0016020(InterPro)|GO:0070588(PANTHER) | |
Cec10g2206 | 865 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 563 | 655 | IPR018108 | - | |
Cec10g2206 | 865 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 753 | 837 | IPR018108 | - | |
Cec10g2206 | 865 | NCBIfam | calcium/proton exchanger | 76 | 423 | IPR004798 | GO:0006816(InterPro)|GO:0015369(InterPro) | |
Cec10g2206 | 865 | PRINTS | Mitochondrial carrier protein signature | 678 | 696 | IPR002067 | GO:0055085(InterPro) | |
Cec10g2206 | 865 | PRINTS | Mitochondrial carrier protein signature | 568 | 581 | IPR002067 | GO:0055085(InterPro) | |
Cec10g2206 | 865 | PRINTS | Mitochondrial carrier protein signature | 762 | 784 | IPR002067 | GO:0055085(InterPro) | |
Cec10g2206 | 865 | PRINTS | Mitochondrial carrier protein signature | 581 | 595 | IPR002067 | GO:0055085(InterPro) | |
Cec10g2206 | 865 | PRINTS | Mitochondrial carrier protein signature | 719 | 737 | IPR002067 | GO:0055085(InterPro) | |
Cec10g2206 | 865 | PRINTS | Mitochondrial carrier protein signature | 630 | 650 | IPR002067 | GO:0055085(InterPro) | |
Cec10g2206 | 865 | FunFam | Vacuolar cation/proton exchanger | 268 | 424 | - | - | |
Cec10g2206 | 865 | Coils | Coil | 831 | 858 | - | - | |
Cec10g2206 | 865 | Pfam | Sodium/calcium exchanger protein | 93 | 249 | IPR004837 | GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cec10g2206 | 865 | Pfam | Sodium/calcium exchanger protein | 280 | 422 | IPR004837 | GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cec10g2206 | 865 | Gene3D | Mitochondrial carrier domain | 564 | 842 | IPR023395 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec07g0398 | Cec-Chr7:4129714 | Cec10g2206 | Cec-Chr10:36470850 | 1.80E-37 | dispersed | |
Cec08g1770 | Cec-Chr8:28800226 | Cec10g2206 | Cec-Chr10:36470850 | 1.60E-38 | dispersed | |
Cec09g0623 | Cec-Chr9:5419345 | Cec10g2206 | Cec-Chr10:36470850 | 3.90E-15 | dispersed | |
Cec10g0414 | Cec-Chr10:4972194 | Cec10g2206 | Cec-Chr10:36470850 | 1.40E-91 | dispersed | |
Cec10g2206 | Cec-Chr10:36470850 | Cec10g2227 | Cec-Chr10:36656643 | 1.70E-15 | dispersed | |
Cec04g0837 | Cec-Chr4:28111281 | Cec10g2206 | Cec-Chr10:36470850 | 1.20E-144 | transposed | |
Cec10g2206 | Cec-Chr10:36470850 | Cec03g0075 | Cec-Chr3:776777 | 8.20E-116 | wgd | |
Cec10g2206 | Cec-Chr10:36470850 | Cec04g0910 | Cec-Chr4:28848057 | 4.20E-35 | wgd | |
Cec10g2206 | Cec-Chr10:36470850 | Cec04g0836 | Cec-Chr4:28101446 | 4.00E-163 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec10g2206 | K07300 | - | csv:101213421 | 672.544 |