Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec10g2214 | ATGGAAGGCCATAATCCTCATCCTCATCCCCATCCCCTTATTCAGCTCCACCAGCAGCAACAAATTCAACTTCCTCCGCCACCGCCGCATCTCCACCAGAGCCTCGCCGTCTCCGCCGATCAAACCACAGCAACAGCCGCCGACAGATTCCCTCAATGGAGTATTCAAGAAACAAAGGAGTTCTTGATGATCAGAGCCGAGCTGGATCAAACCTTCATGGAAACCAAACGAAACAAGCTCTTGTGGGAAATTACTGCCTCCAAAATGAAGGAAAAGGGTTTTAATCGCAGCGCTGAACAGTGTAAATGCAAATGGAAAAACCTCGTTACTCGTTACAAGGGTTGTGAAACAATGGAGCCAGAAATTTCAAGGCAGCAATTTCCATTCTACACAGAGTTACAAGCAATATTTGGGGCAAGAATGCAAAGAATATTATGGGCAGAGGCGGAGAGCGGCGGTAGCGGGTCGAAGAAGAAGACGTTACCATTTTCGTCTGACGATGACGAAGAAAACGATGATAGCGATGGCGATGGAGGCGAGACAAAAGTTAGTGGTAGGAAGAGGAAAAAAGTTAAAGGAATGGGCGGTACGACGACGGGAGGCGGCGAGGGCAGTGGAAAGAGTAGTATCAATGATTTGAAAGAAATGTTGGAAGATTTTATGAATCAACAAATGCAAATGGAGGTGCAATGGAGGGAGGCATTTGAGGCAAGGGAAAAAGAGAGACAAATGAGGGAAGTGGAATGGAGAAGACACATGGAAGCTTTAGAACATGAGAGGATAATGTTGGAAAGAAGATGGAGAGAAAGAGAAGAACAAAGGAGAATGAGAGAAGAAGTTAGGGCTGAGAAAAGAGATGCCTTAATCACAGCTTTGTTAAACAAGCTTAGAAGAGATGATCATATTTAA | 909 | 45.1 | MEGHNPHPHPHPLIQLHQQQQIQLPPPPPHLHQSLAVSADQTTATAADRFPQWSIQETKEFLMIRAELDQTFMETKRNKLLWEITASKMKEKGFNRSAEQCKCKWKNLVTRYKGCETMEPEISRQQFPFYTELQAIFGARMQRILWAEAESGGSGSKKKTLPFSSDDDEENDDSDGDGGETKVSGRKRKKVKGMGGTTTGGGEGSGKSSINDLKEMLEDFMNQQMQMEVQWREAFEAREKERQMREVEWRRHMEALEHERIMLERRWREREEQRRMREEVRAEKRDALITALLNKLRRDDHI | 302 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 36565061 | 36566164 | + | CePI673135_10g022140.1 | Cec10g2214 | 215129 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec10g2214 | 302 | Coils | Coil | 253 | 273 | - | - | |
Cec10g2214 | 302 | PANTHER | FI21293P1 | 26 | 298 | - | - | |
Cec10g2214 | 302 | Gene3D | - | 53 | 114 | - | - | |
Cec10g2214 | 302 | MobiDBLite | consensus disorder prediction | 151 | 210 | - | - | |
Cec10g2214 | 302 | ProSiteProfiles | Myb-like domain profile. | 53 | 109 | IPR001005 | - | |
Cec10g2214 | 302 | FunFam | Zinc finger and SCAN domain-containing 20 | 53 | 114 | - | - | |
Cec10g2214 | 302 | Pfam | Myb/SANT-like DNA-binding domain | 52 | 136 | IPR044822 | - | |
Cec10g2214 | 302 | Coils | Coil | 210 | 230 | - | - | |
Cec10g2214 | 302 | CDD | GT1 | 51 | 116 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec07g1230 | Cec-Chr7:27796478 | Cec10g2214 | Cec-Chr10:36565061 | 5.90E-23 | transposed | |
Cec10g2214 | Cec-Chr10:36565061 | Cec04g0833 | Cec-Chr4:28021903 | 1.20E-37 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
30468 | PF13837 | Myb_DNA-bind_4 | 2.40E-18 | CL0123 | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec10g2214 | - | - | - | 0.0 |