Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g2214 ATGGAAGGCCATAATCCTCATCCTCATCCCCATCCCCTTATTCAGCTCCACCAGCAGCAACAAATTCAACTTCCTCCGCCACCGCCGCATCTCCACCAGAGCCTCGCCGTCTCCGCCGATCAAACCACAGCAACAGCCGCCGACAGATTCCCTCAATGGAGTATTCAAGAAACAAAGGAGTTCTTGATGATCAGAGCCGAGCTGGATCAAACCTTCATGGAAACCAAACGAAACAAGCTCTTGTGGGAAATTACTGCCTCCAAAATGAAGGAAAAGGGTTTTAATCGCAGCGCTGAACAGTGTAAATGCAAATGGAAAAACCTCGTTACTCGTTACAAGGGTTGTGAAACAATGGAGCCAGAAATTTCAAGGCAGCAATTTCCATTCTACACAGAGTTACAAGCAATATTTGGGGCAAGAATGCAAAGAATATTATGGGCAGAGGCGGAGAGCGGCGGTAGCGGGTCGAAGAAGAAGACGTTACCATTTTCGTCTGACGATGACGAAGAAAACGATGATAGCGATGGCGATGGAGGCGAGACAAAAGTTAGTGGTAGGAAGAGGAAAAAAGTTAAAGGAATGGGCGGTACGACGACGGGAGGCGGCGAGGGCAGTGGAAAGAGTAGTATCAATGATTTGAAAGAAATGTTGGAAGATTTTATGAATCAACAAATGCAAATGGAGGTGCAATGGAGGGAGGCATTTGAGGCAAGGGAAAAAGAGAGACAAATGAGGGAAGTGGAATGGAGAAGACACATGGAAGCTTTAGAACATGAGAGGATAATGTTGGAAAGAAGATGGAGAGAAAGAGAAGAACAAAGGAGAATGAGAGAAGAAGTTAGGGCTGAGAAAAGAGATGCCTTAATCACAGCTTTGTTAAACAAGCTTAGAAGAGATGATCATATTTAA 909 45.1 MEGHNPHPHPHPLIQLHQQQQIQLPPPPPHLHQSLAVSADQTTATAADRFPQWSIQETKEFLMIRAELDQTFMETKRNKLLWEITASKMKEKGFNRSAEQCKCKWKNLVTRYKGCETMEPEISRQQFPFYTELQAIFGARMQRILWAEAESGGSGSKKKTLPFSSDDDEENDDSDGDGGETKVSGRKRKKVKGMGGTTTGGGEGSGKSSINDLKEMLEDFMNQQMQMEVQWREAFEAREKERQMREVEWRRHMEALEHERIMLERRWREREEQRRMREEVRAEKRDALITALLNKLRRDDHI 302
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 36565061 36566164 + CePI673135_10g022140.1 Cec10g2214 215129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g2214 302 Coils Coil 253 273 - -
Cec10g2214 302 PANTHER FI21293P1 26 298 - -
Cec10g2214 302 Gene3D - 53 114 - -
Cec10g2214 302 MobiDBLite consensus disorder prediction 151 210 - -
Cec10g2214 302 ProSiteProfiles Myb-like domain profile. 53 109 IPR001005 -
Cec10g2214 302 FunFam Zinc finger and SCAN domain-containing 20 53 114 - -
Cec10g2214 302 Pfam Myb/SANT-like DNA-binding domain 52 136 IPR044822 -
Cec10g2214 302 Coils Coil 210 230 - -
Cec10g2214 302 CDD GT1 51 116 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec07g1230 Cec-Chr7:27796478 Cec10g2214 Cec-Chr10:36565061 5.90E-23 transposed
Cec10g2214 Cec-Chr10:36565061 Cec04g0833 Cec-Chr4:28021903 1.20E-37 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30468 PF13837 Myb_DNA-bind_4 2.40E-18 CL0123 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g2214 - - - 0.0