Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g2230 ATGGACATGGATACCGACGAAAATTCGAATGCCAAAGGAAAGGAAGGGCAAGGGAAGCTCATAATGGTAATATTAGTGGGCGCACCTGGAAGCGGCAAATCCACCTTCTGCGAGCTTGTAATGGGTTCCTCTTCTCGCCCTTGGGTTCGAATCTGTCAGGATACCATTGGAAATGGAAAGTCTGGAACCAAAGCCCAGTGCTTAAAGAGTGCAGCCAGTGCACTGAATAATGGAATGAGTGTATTTGTGGACAGGTGCAATCTTGAAATAGAGCAGCGCGCTGATTTTGTGAAGCTCGGTGGCCCTCAAGTAGATGTACATGCCGTTGTATTAGATCTTCCTGCACAGCTCTGTATCTCTCGTTCTGTGAAGCGGACTGGTCATGAAGGGAACTTATCAGGTGGAAAAGCTGCTGCTGTTGTGAATAAAATGCTGCAAAAGAAAGAATTGCCCAAACTAAATGAAGGGTTCACTCGCATAACCTTTTGCCACAATGAGACCGATGTTCAATCCGCTATAGATATGTACAAATCGCTTGATTTACATAATTTGCTTCCACATGGATGTTTTGGACAGAAGAATCCAAACAAGAAAGTACAACTTGGCATAATGAAGTTCTTGAAGAAAGCAGAAAAACCTTCTGAAGCACGTTCTAGTGCCAATACTGTTAAGGATTCTCCAACTCCACAAACTACCCAGGAAAATAGCGACTCTTGTGATAAAAAGGAAGAGTCTGCCTGCACAATGTCGAAAAATGTAGATATAGAGGCAGAGAAAGGTGAATGTCCAGGCATTAGATCCTTAGAAGACGATATTTCTCAAAGCAATTCTCCAACTCTTGCATTTCCATCTATTTCAACTTCAGATTTCAAGTTTAGCCATGAAAAAGCTGCTGAAATTATTGTTGAGAAGGTTGAGGAATTCAAGGATAAGCTTGGAAATGCCAGACTTGTACTGGTGGACTTGAGTCGTGGATCAAAGATCTTGTCTTTGGTTAAAGCTAAAGCAGCTAAGAAAAATATTAGTTCCACCAAGTTTTTAACATTTGTAGGTGATATAACTAAACTCAATTCAGAAGGTGGATTGCGCTGCAATGTTATAGCCAATGCTGCAAACTGGCGACTGAAACCAGGAGGGGGTGGTGTCAATGCTGCAATTTTTAGTGCTGCAGGTCCTGGTCTGGAAGTGGCAACTAAACAACAAGCAAACTCCCTTCAACCTGGAAATGCCGTGGCCGTTCCGTTGCCTTCAACTTCTCCTTTGTTCAATAGGGAAGGAGTAACCCATGTTATACATGTTCTTGGACCCAACATGAATCCACAGAGGCCAAATTATCTCAGCAACGACTATGATGAAGGCTGCAAACTTCTTCGCAATGCTTACTCTTCCTTATTTCAAGCCTTTATTTCAATTGTAGAAGACAAATTTAAGTCGGTTAAGGAAATTCACGAACGCCTCGGCTCAGTACCTTCAGAACCACAAAAGCACTCTGAGGACACTCAGGACAGCCATCACAAGTTTAAGAGAGAGAATTTGCAAAATCCTGAAAGAAGCAAAAAATGGAAAGGATCTCAAGACCCAACTGAAGCATTAAACCAAAACAACAATAAGACTGTCCCTAAAATGAGTAAACACTGGGGTTCATGGGCACAAGCACTTTACAACACTGCAATGCATCCCGAGCAACATAGCGATACTGTACTGGAGACATCAGATGATATTGTAATACTGAATGATATTTATCCAAAGGCACGCAAGCACCTTCTAGTAGTGGCTCGCCATGAAGGCCTCGATCAACTAACTGATGTATGTAGAGAACACCTTCCATTGTTGAGGACAATGCACGCTGTGGGTTTGAAGTGGATCAATAAGTTCTTTCATGAAGATGCATCATTAGTTTTTCGCCTTGGATACCACTCGGCTCCATCAATGAGGCAACTGCACCTACATGTTATAAGCCAGGATTTTGACTCCAGTCATCTGAAAAACAAGAAGCATTGGAATTCTTTCAACACCGATTTCTTCAGAGACTCGGTTGCCGTTATGGACGAAGTCAGTAGCCATGGAAAGGCGAGCATCATGGACGATGAGAGCTTGATGTCTATGGAGTTACGTTGCAACAGATGCAGAAGTGCTCATCCCAACTTGCCCAAATTGAAAGCGCATAGTTTCAAATGCCAAGCGCCTTTCCCTTCCACACTACTTGAGGGCGGTCGTTTAGTGATTGCGCCAAGTAATGCTCCTCTTTCTTAG 2253 42.96 MDMDTDENSNAKGKEGQGKLIMVILVGAPGSGKSTFCELVMGSSSRPWVRICQDTIGNGKSGTKAQCLKSAASALNNGMSVFVDRCNLEIEQRADFVKLGGPQVDVHAVVLDLPAQLCISRSVKRTGHEGNLSGGKAAAVVNKMLQKKELPKLNEGFTRITFCHNETDVQSAIDMYKSLDLHNLLPHGCFGQKNPNKKVQLGIMKFLKKAEKPSEARSSANTVKDSPTPQTTQENSDSCDKKEESACTMSKNVDIEAEKGECPGIRSLEDDISQSNSPTLAFPSISTSDFKFSHEKAAEIIVEKVEEFKDKLGNARLVLVDLSRGSKILSLVKAKAAKKNISSTKFLTFVGDITKLNSEGGLRCNVIANAANWRLKPGGGGVNAAIFSAAGPGLEVATKQQANSLQPGNAVAVPLPSTSPLFNREGVTHVIHVLGPNMNPQRPNYLSNDYDEGCKLLRNAYSSLFQAFISIVEDKFKSVKEIHERLGSVPSEPQKHSEDTQDSHHKFKRENLQNPERSKKWKGSQDPTEALNQNNNKTVPKMSKHWGSWAQALYNTAMHPEQHSDTVLETSDDIVILNDIYPKARKHLLVVARHEGLDQLTDVCREHLPLLRTMHAVGLKWINKFFHEDASLVFRLGYHSAPSMRQLHLHVISQDFDSSHLKNKKHWNSFNTDFFRDSVAVMDEVSSHGKASIMDDESLMSMELRCNRCRSAHPNLPKLKAHSFKCQAPFPSTLLEGGRLVIAPSNAPLS 750
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 36684410 36687829 - CePI673135_10g022300.1 Cec10g2230 215145
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cec10g2230 750 SMART YBR022w_8 345 476 IPR002589 -
Cec10g2230 750 MobiDBLite consensus disorder prediction 212 243 - -
Cec10g2230 750 MobiDBLite consensus disorder prediction 216 235 - -
Cec10g2230 750 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 22 166 IPR027417 -
Cec10g2230 750 MobiDBLite consensus disorder prediction 485 539 - -
Cec10g2230 750 MobiDBLite consensus disorder prediction 485 524 - -
Cec10g2230 750 Gene3D Leucine Aminopeptidase, subunit E, domain 1 226 326 IPR043472 -
Cec10g2230 750 Gene3D - 3 179 IPR027417 -
Cec10g2230 750 MobiDBLite consensus disorder prediction 525 539 - -
Cec10g2230 750 Pfam AAA domain 22 149 - -
Cec10g2230 750 SUPERFAMILY Macro domain-like 328 478 IPR043472 -
Cec10g2230 750 PANTHER APRATAXIN-RELATED 84 746 - GO:0000012(PANTHER)|GO:0003697(PANTHER)|GO:0003725(PANTHER)|GO:0005634(PANTHER)|GO:0030983(PANTHER)|GO:0033699(PANTHER)|GO:1990165(PANTHER)
Cec10g2230 750 FunFam Transcription factor bHLH140 326 473 - -
Cec10g2230 750 ProSiteProfiles HIT domain profile. 553 661 IPR011146 GO:0003824(InterPro)
Cec10g2230 750 Gene3D Leucine Aminopeptidase, subunit E, domain 1 327 480 IPR043472 -
Cec10g2230 750 SUPERFAMILY HIT-like 536 710 IPR036265 -
Cec10g2230 750 ProSitePatterns HIT domain signature. 635 653 IPR019808 -
Cec10g2230 750 Pfam Scavenger mRNA decapping enzyme C-term binding 554 666 - -
Cec10g2230 750 Gene3D - 548 728 IPR036265 -
Cec10g2230 750 ProSiteProfiles Macro domain profile. 333 589 IPR002589 -
Cec10g2230 750 FunFam aprataxin isoform X2 547 727 - -
Cec10g2230 750 FunFam Transcription factor bHLH140 8 178 - -
Cec10g2230 750 Pfam C2HE / C2H2 / C2HC zinc-binding finger 671 722 IPR032566 -
Cec10g2230 750 Pfam Macro domain 369 466 IPR002589 -
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g2230 K10863 - csv:101216867 1344.33