Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cec10g2230 | ATGGACATGGATACCGACGAAAATTCGAATGCCAAAGGAAAGGAAGGGCAAGGGAAGCTCATAATGGTAATATTAGTGGGCGCACCTGGAAGCGGCAAATCCACCTTCTGCGAGCTTGTAATGGGTTCCTCTTCTCGCCCTTGGGTTCGAATCTGTCAGGATACCATTGGAAATGGAAAGTCTGGAACCAAAGCCCAGTGCTTAAAGAGTGCAGCCAGTGCACTGAATAATGGAATGAGTGTATTTGTGGACAGGTGCAATCTTGAAATAGAGCAGCGCGCTGATTTTGTGAAGCTCGGTGGCCCTCAAGTAGATGTACATGCCGTTGTATTAGATCTTCCTGCACAGCTCTGTATCTCTCGTTCTGTGAAGCGGACTGGTCATGAAGGGAACTTATCAGGTGGAAAAGCTGCTGCTGTTGTGAATAAAATGCTGCAAAAGAAAGAATTGCCCAAACTAAATGAAGGGTTCACTCGCATAACCTTTTGCCACAATGAGACCGATGTTCAATCCGCTATAGATATGTACAAATCGCTTGATTTACATAATTTGCTTCCACATGGATGTTTTGGACAGAAGAATCCAAACAAGAAAGTACAACTTGGCATAATGAAGTTCTTGAAGAAAGCAGAAAAACCTTCTGAAGCACGTTCTAGTGCCAATACTGTTAAGGATTCTCCAACTCCACAAACTACCCAGGAAAATAGCGACTCTTGTGATAAAAAGGAAGAGTCTGCCTGCACAATGTCGAAAAATGTAGATATAGAGGCAGAGAAAGGTGAATGTCCAGGCATTAGATCCTTAGAAGACGATATTTCTCAAAGCAATTCTCCAACTCTTGCATTTCCATCTATTTCAACTTCAGATTTCAAGTTTAGCCATGAAAAAGCTGCTGAAATTATTGTTGAGAAGGTTGAGGAATTCAAGGATAAGCTTGGAAATGCCAGACTTGTACTGGTGGACTTGAGTCGTGGATCAAAGATCTTGTCTTTGGTTAAAGCTAAAGCAGCTAAGAAAAATATTAGTTCCACCAAGTTTTTAACATTTGTAGGTGATATAACTAAACTCAATTCAGAAGGTGGATTGCGCTGCAATGTTATAGCCAATGCTGCAAACTGGCGACTGAAACCAGGAGGGGGTGGTGTCAATGCTGCAATTTTTAGTGCTGCAGGTCCTGGTCTGGAAGTGGCAACTAAACAACAAGCAAACTCCCTTCAACCTGGAAATGCCGTGGCCGTTCCGTTGCCTTCAACTTCTCCTTTGTTCAATAGGGAAGGAGTAACCCATGTTATACATGTTCTTGGACCCAACATGAATCCACAGAGGCCAAATTATCTCAGCAACGACTATGATGAAGGCTGCAAACTTCTTCGCAATGCTTACTCTTCCTTATTTCAAGCCTTTATTTCAATTGTAGAAGACAAATTTAAGTCGGTTAAGGAAATTCACGAACGCCTCGGCTCAGTACCTTCAGAACCACAAAAGCACTCTGAGGACACTCAGGACAGCCATCACAAGTTTAAGAGAGAGAATTTGCAAAATCCTGAAAGAAGCAAAAAATGGAAAGGATCTCAAGACCCAACTGAAGCATTAAACCAAAACAACAATAAGACTGTCCCTAAAATGAGTAAACACTGGGGTTCATGGGCACAAGCACTTTACAACACTGCAATGCATCCCGAGCAACATAGCGATACTGTACTGGAGACATCAGATGATATTGTAATACTGAATGATATTTATCCAAAGGCACGCAAGCACCTTCTAGTAGTGGCTCGCCATGAAGGCCTCGATCAACTAACTGATGTATGTAGAGAACACCTTCCATTGTTGAGGACAATGCACGCTGTGGGTTTGAAGTGGATCAATAAGTTCTTTCATGAAGATGCATCATTAGTTTTTCGCCTTGGATACCACTCGGCTCCATCAATGAGGCAACTGCACCTACATGTTATAAGCCAGGATTTTGACTCCAGTCATCTGAAAAACAAGAAGCATTGGAATTCTTTCAACACCGATTTCTTCAGAGACTCGGTTGCCGTTATGGACGAAGTCAGTAGCCATGGAAAGGCGAGCATCATGGACGATGAGAGCTTGATGTCTATGGAGTTACGTTGCAACAGATGCAGAAGTGCTCATCCCAACTTGCCCAAATTGAAAGCGCATAGTTTCAAATGCCAAGCGCCTTTCCCTTCCACACTACTTGAGGGCGGTCGTTTAGTGATTGCGCCAAGTAATGCTCCTCTTTCTTAG | 2253 | 42.96 | MDMDTDENSNAKGKEGQGKLIMVILVGAPGSGKSTFCELVMGSSSRPWVRICQDTIGNGKSGTKAQCLKSAASALNNGMSVFVDRCNLEIEQRADFVKLGGPQVDVHAVVLDLPAQLCISRSVKRTGHEGNLSGGKAAAVVNKMLQKKELPKLNEGFTRITFCHNETDVQSAIDMYKSLDLHNLLPHGCFGQKNPNKKVQLGIMKFLKKAEKPSEARSSANTVKDSPTPQTTQENSDSCDKKEESACTMSKNVDIEAEKGECPGIRSLEDDISQSNSPTLAFPSISTSDFKFSHEKAAEIIVEKVEEFKDKLGNARLVLVDLSRGSKILSLVKAKAAKKNISSTKFLTFVGDITKLNSEGGLRCNVIANAANWRLKPGGGGVNAAIFSAAGPGLEVATKQQANSLQPGNAVAVPLPSTSPLFNREGVTHVIHVLGPNMNPQRPNYLSNDYDEGCKLLRNAYSSLFQAFISIVEDKFKSVKEIHERLGSVPSEPQKHSEDTQDSHHKFKRENLQNPERSKKWKGSQDPTEALNQNNNKTVPKMSKHWGSWAQALYNTAMHPEQHSDTVLETSDDIVILNDIYPKARKHLLVVARHEGLDQLTDVCREHLPLLRTMHAVGLKWINKFFHEDASLVFRLGYHSAPSMRQLHLHVISQDFDSSHLKNKKHWNSFNTDFFRDSVAVMDEVSSHGKASIMDDESLMSMELRCNRCRSAHPNLPKLKAHSFKCQAPFPSTLLEGGRLVIAPSNAPLS | 750 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 36684410 | 36687829 | - | CePI673135_10g022300.1 | Cec10g2230 | 215145 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cec10g2230 | 750 | SMART | YBR022w_8 | 345 | 476 | IPR002589 | - | |
| Cec10g2230 | 750 | MobiDBLite | consensus disorder prediction | 212 | 243 | - | - | |
| Cec10g2230 | 750 | MobiDBLite | consensus disorder prediction | 216 | 235 | - | - | |
| Cec10g2230 | 750 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 22 | 166 | IPR027417 | - | |
| Cec10g2230 | 750 | MobiDBLite | consensus disorder prediction | 485 | 539 | - | - | |
| Cec10g2230 | 750 | MobiDBLite | consensus disorder prediction | 485 | 524 | - | - | |
| Cec10g2230 | 750 | Gene3D | Leucine Aminopeptidase, subunit E, domain 1 | 226 | 326 | IPR043472 | - | |
| Cec10g2230 | 750 | Gene3D | - | 3 | 179 | IPR027417 | - | |
| Cec10g2230 | 750 | MobiDBLite | consensus disorder prediction | 525 | 539 | - | - | |
| Cec10g2230 | 750 | Pfam | AAA domain | 22 | 149 | - | - | |
| Cec10g2230 | 750 | SUPERFAMILY | Macro domain-like | 328 | 478 | IPR043472 | - | |
| Cec10g2230 | 750 | PANTHER | APRATAXIN-RELATED | 84 | 746 | - | GO:0000012(PANTHER)|GO:0003697(PANTHER)|GO:0003725(PANTHER)|GO:0005634(PANTHER)|GO:0030983(PANTHER)|GO:0033699(PANTHER)|GO:1990165(PANTHER) | |
| Cec10g2230 | 750 | FunFam | Transcription factor bHLH140 | 326 | 473 | - | - | |
| Cec10g2230 | 750 | ProSiteProfiles | HIT domain profile. | 553 | 661 | IPR011146 | GO:0003824(InterPro) | |
| Cec10g2230 | 750 | Gene3D | Leucine Aminopeptidase, subunit E, domain 1 | 327 | 480 | IPR043472 | - | |
| Cec10g2230 | 750 | SUPERFAMILY | HIT-like | 536 | 710 | IPR036265 | - | |
| Cec10g2230 | 750 | ProSitePatterns | HIT domain signature. | 635 | 653 | IPR019808 | - | |
| Cec10g2230 | 750 | Pfam | Scavenger mRNA decapping enzyme C-term binding | 554 | 666 | - | - | |
| Cec10g2230 | 750 | Gene3D | - | 548 | 728 | IPR036265 | - | |
| Cec10g2230 | 750 | ProSiteProfiles | Macro domain profile. | 333 | 589 | IPR002589 | - | |
| Cec10g2230 | 750 | FunFam | aprataxin isoform X2 | 547 | 727 | - | - | |
| Cec10g2230 | 750 | FunFam | Transcription factor bHLH140 | 8 | 178 | - | - | |
| Cec10g2230 | 750 | Pfam | C2HE / C2H2 / C2HC zinc-binding finger | 671 | 722 | IPR032566 | - | |
| Cec10g2230 | 750 | Pfam | Macro domain | 369 | 466 | IPR002589 | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cec10g2230 | K10863 | - | csv:101216867 | 1344.33 |