Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g2271 ATGAGTTGTAACGAGAAGAATAGAGGGGTAGATGATAGGGAAACTGAGCAGCCAGTTTTTAGGAACTCTGTCGAGGCACAACGGATACCAGCCATCCAGAATGGATCCATAACGGCCCAACAGTTGACGATTGATGATAATCTTCTTGTTGACCCAAAATTGCTATTTATTGGATCGAAGATTGGTGAGGGTGCTCACGGGAAGGTTTATGAAGGCAGGTACCGGAACCAAATTGTGGCCATTAAAGTTCTCCATCGAGGGAGTACTCCAGAAGAAAGAGCATCTCTTGAAAATCGTTTTGCCCGTGAAGTAAATATGATGTCCCGAGTAAAACATGAAAATCTTGTCAAGTTCATTGGAGCTTGTAAAGAACCTCTAATGGTGATAGTTACAGAGCTATTACCAGGAATGTCACTCAGGAAGTATCTGATGAATAATCGTAAGCAACAGCTGGACCCTCGGATGGCCATTAACTTTGCTTTGGATGTTGCTCGTGCTATGGATTGTCTACATGCAAATGGGATTATACATAGAGATCTGAAACCTGATAATTTGTTGCTTACTGCAAATCAAAGATCTGTGAAGCTTGCAGACTTTGGACTTGCTAGAGAAGAATCTGTGACTGAGATGATGACTGCTGAAACAGGGACTTACCGATGGATGGCTCCTGAGTTGTATAGCACTGTGACATTGCGCCAGGGAGAGAAAAAGCATTACAACAACAAAGTCGATGTATACAGTTTTGGAATTGTCTTATGGGAGCTCTTGACCAACCGAATGCCATTTGAAGGGATGTCCAATTTGCAAGCTGCTTATGCTGCTGCTTTCAAGCAAGAGAGACCTAGTATTCCAGGTGACATACCTCCCGATTTAGCATTTATAGTACAGTCGTGTTGGGTTGAAGATCCTAACATGAGGCCCAGCTTCAGCCAGATCATCCGCATGCTTAATGCTTATCTGTTTACACTCCCAACTCCTTCACCATCTTCACCATCTTCACCAAAAACTGACACAACAGAGACAGCAACAACTAGCGATGGTGCTATTACCGAGTTCTCTGCTCGTGCAAGAGGAAAGTTTGGATTCCTTCGCCAACTGTTTGCTGCTAAGAGGGCTAAGAACTCGCAATGA 1131 43.68 MSCNEKNRGVDDRETEQPVFRNSVEAQRIPAIQNGSITAQQLTIDDNLLVDPKLLFIGSKIGEGAHGKVYEGRYRNQIVAIKVLHRGSTPEERASLENRFAREVNMMSRVKHENLVKFIGACKEPLMVIVTELLPGMSLRKYLMNNRKQQLDPRMAINFALDVARAMDCLHANGIIHRDLKPDNLLLTANQRSVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPSIPGDIPPDLAFIVQSCWVEDPNMRPSFSQIIRMLNAYLFTLPTPSPSSPSSPKTDTTETATTSDGAITEFSARARGKFGFLRQLFAAKRAKNSQ 376
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 36947823 36950967 + CePI673135_10g022710.1 Cec10g2271 215186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g2271 376 SUPERFAMILY Protein kinase-like (PK-like) 54 345 IPR011009 -
Cec10g2271 376 PRINTS Tyrosine kinase catalytic domain signature 169 187 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec10g2271 376 PRINTS Tyrosine kinase catalytic domain signature 287 309 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec10g2271 376 PRINTS Tyrosine kinase catalytic domain signature 243 265 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec10g2271 376 PRINTS Tyrosine kinase catalytic domain signature 131 144 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec10g2271 376 MobiDBLite consensus disorder prediction 1 19 - -
Cec10g2271 376 FunFam serine/threonine-protein kinase HT1 136 337 - -
Cec10g2271 376 Gene3D Transferase(Phosphotransferase) domain 1 138 346 - -
Cec10g2271 376 MobiDBLite consensus disorder prediction 1 21 - -
Cec10g2271 376 Pfam Protein tyrosine and serine/threonine kinase 57 316 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec10g2271 376 ProSiteProfiles Protein kinase domain profile. 55 320 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec10g2271 376 FunFam Kinase suppressor of Ras 1 44 134 - -
Cec10g2271 376 SMART serkin_6 55 320 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec10g2271 376 Gene3D Phosphorylase Kinase; domain 1 43 134 - -
Cec10g2271 376 ProSitePatterns Protein kinases ATP-binding region signature. 61 82 IPR017441 GO:0005524(InterPro)
Cec10g2271 376 MobiDBLite consensus disorder prediction 325 349 - -
Cec10g2271 376 CDD STKc_MAP3K-like 61 316 - -
Cec10g2271 376 PANTHER SERINE-THREONINE PROTEIN KINASE 49 317 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Cec10g2271 376 ProSitePatterns Serine/Threonine protein kinases active-site signature. 175 187 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec10g1393 Cec-Chr10:28233276 Cec10g2271 Cec-Chr10:36947823 2.20E-114 dispersed
Cec10g2271 Cec-Chr10:36947823 Cec11g1164 Cec-Chr11:23849824 8.40E-65 dispersed
Cec10g2271 Cec-Chr10:36947823 Cec06g1938 Cec-Chr6:32730833 5.50E-117 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72364 PF07714 PK_Tyr_Ser-Thr 5.80E-62 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g2271 - - - 0.0