Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g2282 ATGATCACGGTGTGGCTTTGTTATGCTTTATTTGTTGTCGAGAAGAACAGCTTGAAGATAACTTCCCCAGATTCCATCAAGGGTGTTTACGAATGTGCGATTGGGAATTTTGGGGTTCCTGAATATGGAGGCACAATGACTGGCATCGTGCATTATCCTAAAGCCAATCAGAAGGCATGCAAGAGCTTTGAGGATGCCGGTATCTCTTTCAAGTCCAAATCTGGAAGTCTCCCTACCTTTGTTCTTGCCGATCGAGGAGATTGTTACTTCACCACGAAGGCGTGGAATGCACAAAATGGTGGAGCTGCAGCAATTCTTGTTGCAGATGATAGACTTGAACCGTTGATTACCATGGACTCTCCAGAACAAGAGAAGGCAGATGCCAATTACCTAAAAGACATTACCGTACCTTCTGCTCTTTTTAGCAAAAGCTTGGGGGATGCCATCAAGAAAGCTCTATCTAGTGGAGAGATGGTTAATATAAATCTTGATTGGACAGAAGCTCTTCCACATCCTGATGATCGAGTTGAGTATGAATTTTGGACAAATAGTAATGATGAGTGTGGGCCAAAGTGTGATAGTCAGATTGAGTTTGTGAAAAACTTCAAAGGAGCTGCTCAGACGCTTGAGCAGAAAGGGTACACTCAATTTACTCCCCATTATATAACTTGGTATTGCCCAGATGCTTTTACTTTGAGTAAGCAATGCAAATCTCAATGCATCAATCATGGGAGATACTGTGCACCAGATCCCGAACAGGATTTCAGTAAAGGATATGATGGAAAGGATGTGGTTGTTCAAAATCTACGCCAAATCTGTTTCTTTAAAGTTGCAAATGAATCTGGAAAACCTTGGCTTTGGTGGGATTATGTCACTGACTTTTCAATCCGTTGTCCTATGAAAGAAAACAAGTACGACGAGGAATGTGCCAATGAAGTTATTAAATCATTTGGTATGGATCTTAACAAGATAAAAGAATGTATTGGAGATCCAGAGGCAGATGTGGAGAACCCAATTCTTAAAGCTGAACAGGATGCACAGATTGGTAGGGGTTCCCGTGGAGATGTTACTATATTGCCGACTCTTGTTATAAATAACAGACAGTATAGAGGCAAGCTGGATAAAGGAGCAGTTCTGAAAGGCATTTGTTCTGGTTTTCAGGAGACAACAGAGCCTGCAATTTGTTTAACTGAAGACGTGGAAACAAATGAGTGTTTAACAAATAATGGTGGTTGCTGGCACAATAAGGATGCAAATGTTTCTGCATGCAGGGATACATTTCGAGGAAGAGTTTGTGAATGTCCTACTGTTCGAGGTGTGAAGTTCATTGGAGATGGCTATACTCACTGTGAACCATCAGGAGCTTTACGCTGTGAAATAAATAATGGGGGTTGTTGGAAGGGCACCCAAGATGGAAGAACTTACACTGCCTGTTCTGATGACCATACAAAGGGCTGCAAGTGCCCTCCAGGATTTAAAGGCGATGGAGTCCGCAATTGTGAAGATGTGGATGAGTGCAAGGAGAAGCTAGCATGCCAGTGCCCAGAGTGCAAATGTCAGAATACATGGGGCAGCTATGATTGCAGTTGCAGAAATGGTTTGCTGTATATGCACGAACATGATACATGTATAGGTAGCATGGGAAACACTGTGACAAGCTGGAGCGTTGTAAAGATTACTGTCCTTGTGTTAGCCATCACTGGGATCGCGGGATATGCAGTTTACAAGTACAGAATCCGGAGGTATATGGATTCTGAGATACGGGCTATCATGGCTCAATATATGCCCTTGGACAATCAAGGAGAGACTTCTAATCAGCATTTGCCATTTGGTTCCTCTGGGAAGAGGCTTGATTGGAGAAGCATGCTTTTCAAACTATTCCTCATTCTTGTCCTAGCTCTAGCTCCTGCTTCCGTTTCTGCTTTGGACACTGTTTTCAACGACGACGTTTTGGGATTGATAGTGTTCAAAGCTGGCCTTCAAGACCCTATGGGTAAATTGGTCACATGGAACGAAGACGATGAAACTCCCTGCAATTGGTTTGGTGTCAAATGTAATCCTAAAACCAATAGGGTCTCTGAGCTTGTCCTTGATGGATTCTCTTTGTCTGGTCACATTGATCGTGGACTCCTAAGGTTGCAATTCCTCCAAATACTCTCACTTGCCAACAACAACTTCACTGGCACCATCAACTCTGCTCTTTCTCACCTTGTAAATTTGCAAGTCATTGATTTCAGTGACAACAGTTTATCTGGACCCATTCCTGAACAGCTTTTCCTACAATGTGGGTCTATAAGAGTTCTTTCATTTGCCAGAAACAACCTCATAGGAAACATCCCTCAATCCTTAACCTCTTGCTTCTCTCTGGAGATTCTTAACTTCTCCTCCAACCACCTTTCTGGAAAATTGCCTTCTGGGTTATGGTATTTGAGGGGGCTTCAGTCTCTGGATTTCTCTAACAACTTGCTTGAGGGGCAGATTCCTCCTGGAATTCAAAATTTGTACGATTTGAGATTTGTTAGCTTACACAAGAATCGATTGTCTGGAAAGCTTCCTGAGGATATTGGTGGCTGCTTACTTCTAAAATCAATCGATTTTAGTGAGAATATCCTTTCGGGTGGTCTTCCAGAGTCAATGCAGATGCTCAGTTCTTGCACTTATCTGAATTTACGAGGAAATTCTCTCACGGGTGAAGTCCCTCGTTGGATTGGGGAACTTAAAAATCTTGACACCTTAGATCTTTCTGCCAATAACTTTTCTGGTCAGCTGCCAAGTTCAATTGGCAACCTCCAATTGCTGAAGAAGTTTAATGTATCCACGAACTATTTAACTGGAAACTTGCCAGAATCCATGGCAAATTGTAATAACCTCTTGAGTATTGATGCTAGCCATAATCATTTGACTGGCAATCTCCCTACATGGATCTTTAGGGCAGCTATGCCAAGTGTTCCATTTTCTTCGTACAGACTGGGAGAAAACCTTTCATCTCCAGCCCCTTTCCAGGGTCTTCAAGTTTTGGATTTATCTTCAAATGTTTTCTCTGGTCACATTCCATCTAATGTTGGAGAACTTAATAACTTGCAGTTGCTGAACATATCCAGAAACCATCTCGTGGGTTCTATTCCGGGGAGCATTGGTGAACTAAAATCAGCATATGCTCTTGACTTCAGTGACAATCAATTAAATGGAAGCATCCCTGCTGAAATTGGAGGAGCGATCTCACTCAAGGAGTTGAGGCTGAAGAAGAACTCCCTCACTGGGGAAATCCCAGTCAACATTGACAAATGCTCCTTGTTAACGTCATTGATTCTTTCTCACAACAACCTAACAGGCTCAATTCCTGCTTCCGTTGCAAACCTCTCCAACCTTGAAGATGTAGACTTGTCTTTCAACAAACTGTCCGGAAGCCTGCCCAAGGAGCTGACTAATCTTTCCCACCTCCTCTCCTTCAATATCTCCCACAATCACCTTGAGGGAGAACTGCCAGTTGGGGGCTTCTTCAACACTATATCTCCCTTGTCTATATCACATAACCCATCTCTTTGTGGTGCTGTTGTCAATAGGTCCTGCCCATCTGTCCATCCAAAACCGATTGTCCTAAACCCAAATTCTTCTGATACCAATGGAAATTCCCCCTCCCACAAGCATCATCATGAGATCATACTCAGCATATCTTCCATAATTGCCATTGGTGCAGCTTCTTTTATCCTACTTGGTGTAGTAGCTGTCACTATCCTCAATATCCGAGCAAGGTCCTCACAGTCACGGTCTGCTGCTCTTGTATTGTCTGCCGGGGAGGACTTTAGCTGCTCCCCAAAAACTAATCCAGACTACGGAAAGCTCATCATGTTTTCTGGAGATGCAGAGTTTGTAGTTGGCGCCCAAGCATTGCTGAACAAGGACTGCGAACTCGGTCGAGGTGGATTTGGGGTTGTTTACAAAACAGTGCTTCGAGATGGGTGTTTAGTTGCAATCAAGAAGTTGACTGTCACAAGCTTGATTAAGTCACGAGAAGATTTTGAGAGTGAAGTGAAGAAGCTGGGACAGATCAGGCATCACAATCTTGTGGCACTTGAAGGGTATTACTGGACAACCTCCTTGCAGCTCCTCATTTATGAATATGTTCCCAATGGAAGTTTGTATAAACATCTACATGATGGAACTGGCGACAATTGTTTGTCTTGGCGGCAGAGGTTCAAGATTGTTCTTGGGATGGCCAAAGGATTGGCTTATTTGCACCACAATAGTATCATTCACTACAACTTGAAGTCAACCAATGTTTTGATAGACAGTTCTGGGAAACCAAAAGTAGGGGACTATGGCTTGGCAAGGTTGCTGCCAATGTTGGACCGTTGCATCTTAAGCAGTAAAATCCAAAGCGCTTTGGGATACATGGCTCCAGAGTTTGCCTGCAAAGCAGTGACTATAACTGAAAAGTGTGATGTGTATGGTTTTGGCATCTTGGTTTTGGAAGTGGTGACAGGAAAAAGACCTGTCGAGTACATGGAAGATGATGTTATAGTTCTCTGTGATATGGTGAGGGTAGCTTTGGATGAAGGCACGGTGGAGCAATGTGTTGATGAGAGGCTCCAATCGAACTTCCGTATTGAAGAGGCCATTCCTGTAATGAAACTAGGTTTGATATGTGCATCTCAAGTACCATCGAACAGGCCAGACATGAATGAGGTGGTCAATATATTAGAGTTGATCCAATCCCCCTCTGAAGTTGACGAGGAGTTGGAATGA 4746 43.22 MITVWLCYALFVVEKNSLKITSPDSIKGVYECAIGNFGVPEYGGTMTGIVHYPKANQKACKSFEDAGISFKSKSGSLPTFVLADRGDCYFTTKAWNAQNGGAAAILVADDRLEPLITMDSPEQEKADANYLKDITVPSALFSKSLGDAIKKALSSGEMVNINLDWTEALPHPDDRVEYEFWTNSNDECGPKCDSQIEFVKNFKGAAQTLEQKGYTQFTPHYITWYCPDAFTLSKQCKSQCINHGRYCAPDPEQDFSKGYDGKDVVVQNLRQICFFKVANESGKPWLWWDYVTDFSIRCPMKENKYDEECANEVIKSFGMDLNKIKECIGDPEADVENPILKAEQDAQIGRGSRGDVTILPTLVINNRQYRGKLDKGAVLKGICSGFQETTEPAICLTEDVETNECLTNNGGCWHNKDANVSACRDTFRGRVCECPTVRGVKFIGDGYTHCEPSGALRCEINNGGCWKGTQDGRTYTACSDDHTKGCKCPPGFKGDGVRNCEDVDECKEKLACQCPECKCQNTWGSYDCSCRNGLLYMHEHDTCIGSMGNTVTSWSVVKITVLVLAITGIAGYAVYKYRIRRYMDSEIRAIMAQYMPLDNQGETSNQHLPFGSSGKRLDWRSMLFKLFLILVLALAPASVSALDTVFNDDVLGLIVFKAGLQDPMGKLVTWNEDDETPCNWFGVKCNPKTNRVSELVLDGFSLSGHIDRGLLRLQFLQILSLANNNFTGTINSALSHLVNLQVIDFSDNSLSGPIPEQLFLQCGSIRVLSFARNNLIGNIPQSLTSCFSLEILNFSSNHLSGKLPSGLWYLRGLQSLDFSNNLLEGQIPPGIQNLYDLRFVSLHKNRLSGKLPEDIGGCLLLKSIDFSENILSGGLPESMQMLSSCTYLNLRGNSLTGEVPRWIGELKNLDTLDLSANNFSGQLPSSIGNLQLLKKFNVSTNYLTGNLPESMANCNNLLSIDASHNHLTGNLPTWIFRAAMPSVPFSSYRLGENLSSPAPFQGLQVLDLSSNVFSGHIPSNVGELNNLQLLNISRNHLVGSIPGSIGELKSAYALDFSDNQLNGSIPAEIGGAISLKELRLKKNSLTGEIPVNIDKCSLLTSLILSHNNLTGSIPASVANLSNLEDVDLSFNKLSGSLPKELTNLSHLLSFNISHNHLEGELPVGGFFNTISPLSISHNPSLCGAVVNRSCPSVHPKPIVLNPNSSDTNGNSPSHKHHHEIILSISSIIAIGAASFILLGVVAVTILNIRARSSQSRSAALVLSAGEDFSCSPKTNPDYGKLIMFSGDAEFVVGAQALLNKDCELGRGGFGVVYKTVLRDGCLVAIKKLTVTSLIKSREDFESEVKKLGQIRHHNLVALEGYYWTTSLQLLIYEYVPNGSLYKHLHDGTGDNCLSWRQRFKIVLGMAKGLAYLHHNSIIHYNLKSTNVLIDSSGKPKVGDYGLARLLPMLDRCILSSKIQSALGYMAPEFACKAVTITEKCDVYGFGILVLEVVTGKRPVEYMEDDVIVLCDMVRVALDEGTVEQCVDERLQSNFRIEEAIPVMKLGLICASQVPSNRPDMNEVVNILELIQSPSEVDEELE 1581
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 36997328 37008402 - CePI673135_10g022820.1 Cec10g2282 215197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g2282 1581 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 1292 1374 - -
Cec10g2282 1581 Pfam Protein tyrosine and serine/threonine kinase 1300 1566 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec10g2282 1581 SUPERFAMILY Protein kinase-like (PK-like) 1302 1570 IPR011009 -
Cec10g2282 1581 SUPERFAMILY PA domain 80 158 IPR046450 -
Cec10g2282 1581 Pfam Leucine Rich Repeat 813 834 IPR001611 GO:0005515(InterPro)
Cec10g2282 1581 Pfam Leucine Rich Repeat 1003 1024 IPR001611 GO:0005515(InterPro)
Cec10g2282 1581 Pfam Leucine Rich Repeat 739 758 IPR001611 GO:0005515(InterPro)
Cec10g2282 1581 Pfam Leucine Rich Repeat 716 737 IPR001611 GO:0005515(InterPro)
Cec10g2282 1581 Pfam Leucine Rich Repeat 1099 1120 IPR001611 GO:0005515(InterPro)
Cec10g2282 1581 Pfam Leucine Rich Repeat 886 906 IPR001611 GO:0005515(InterPro)
Cec10g2282 1581 Pfam Leucine Rich Repeat 788 810 IPR001611 GO:0005515(InterPro)
Cec10g2282 1581 Pfam Leucine Rich Repeat 1026 1048 IPR001611 GO:0005515(InterPro)
Cec10g2282 1581 Pfam Leucine Rich Repeat 1122 1144 IPR001611 GO:0005515(InterPro)
Cec10g2282 1581 Pfam Leucine Rich Repeat 908 930 IPR001611 GO:0005515(InterPro)
Cec10g2282 1581 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 627 1568 IPR050647 -
Cec10g2282 1581 CDD EGF_CA 502 533 - -
Cec10g2282 1581 Gene3D Transferase(Phosphotransferase) domain 1 1375 1580 - -
Cec10g2282 1581 ProSitePatterns Calcium-binding EGF-like domain signature. 502 528 IPR018097 GO:0005509(InterPro)
Cec10g2282 1581 FunFam Vacuolar-sorting receptor 1 8 172 - -
Cec10g2282 1581 Pfam PA domain 52 149 IPR003137 -
Cec10g2282 1581 Gene3D Laminin 456 544 - -
Cec10g2282 1581 SMART egfca_6 502 544 IPR001881 GO:0005509(InterPro)
Cec10g2282 1581 Pfam Leucine rich repeat N-terminal domain 647 686 IPR013210 -
Cec10g2282 1581 ProSitePatterns Protein kinases ATP-binding region signature. 1304 1327 IPR017441 GO:0005524(InterPro)
Cec10g2282 1581 Gene3D - 8 172 - -
Cec10g2282 1581 Gene3D Ribonuclease Inhibitor 905 983 IPR032675 -
Cec10g2282 1581 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 1375 1576 - -
Cec10g2282 1581 Gene3D Phosphorylase Kinase; domain 1 1288 1374 - -
Cec10g2282 1581 Gene3D Laminin 395 445 - -
Cec10g2282 1581 Gene3D Ribonuclease Inhibitor 647 803 IPR032675 -
Cec10g2282 1581 SUPERFAMILY RNI-like 905 1170 - -
Cec10g2282 1581 SUPERFAMILY L domain-like 664 975 - -
Cec10g2282 1581 SMART LRR_typ_2 1120 1143 IPR003591 -
Cec10g2282 1581 SMART LRR_typ_2 906 930 IPR003591 -
Cec10g2282 1581 SMART LRR_typ_2 737 761 IPR003591 -
Cec10g2282 1581 SMART LRR_typ_2 1024 1048 IPR003591 -
Cec10g2282 1581 SMART LRR_typ_2 1144 1168 IPR003591 -
Cec10g2282 1581 SMART LRR_typ_2 713 736 IPR003591 -
Cec10g2282 1581 SMART LRR_typ_2 834 858 IPR003591 -
Cec10g2282 1581 SMART LRR_typ_2 810 833 IPR003591 -
Cec10g2282 1581 CDD STKc_IRAK 1304 1570 - -
Cec10g2282 1581 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 647 925 - -
Cec10g2282 1581 Gene3D Ribonuclease Inhibitor 804 904 IPR032675 -
Cec10g2282 1581 FunFam vacuolar-sorting receptor 1 395 451 - -
Cec10g2282 1581 Gene3D Ribonuclease Inhibitor 986 1193 IPR032675 -
Cec10g2282 1581 ProSiteProfiles Protein kinase domain profile. 1298 1570 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec10g2282 1581 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 926 1194 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0726 Cec-Chr2:7699547 Cec10g2282 Cec-Chr10:36997328 1.10E-271 dispersed
Cec07g0576 Cec-Chr7:7295543 Cec10g2282 Cec-Chr10:36997328 7.10E-158 dispersed
Cec08g0386 Cec-Chr8:10809587 Cec10g2282 Cec-Chr10:36997328 1.60E-06 dispersed
Cec10g0341 Cec-Chr10:4089807 Cec10g2282 Cec-Chr10:36997328 7.20E-83 dispersed
Cec10g1051 Cec-Chr10:23491159 Cec10g2282 Cec-Chr10:36997328 5.60E-263 dispersed
Cec10g2282 Cec-Chr10:36997328 Cec11g1765 Cec-Chr11:31850201 1.70E-50 dispersed
Cec07g1694 Cec-Chr7:32530773 Cec10g2282 Cec-Chr10:36997328 3.00E-24 transposed
Cec10g2282 Cec-Chr10:36997328 Cec11g0592 Cec-Chr11:6499016 5.20E-185 wgd
Cec10g2282 Cec-Chr10:36997328 Cec05g0922 Cec-Chr5:8040270 1.20E-48 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72366 PF07714 PK_Tyr_Ser-Thr 3.00E-41 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g2282 - - - 0.0