Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g2293 ATGTCACCTGTGCGAACGCTGCTACTTTTCGCTTTCTTCTACGCTGGAATCGACACAACCGGTTCTTTCACTGATCCCCGCGATTCTGCGGCGCTGGAATCCCTGAAAAACGAATGGCAAAATACACCACCAAGCTGGGGAGCATCAAATGATCCGTGTGGAGCTCCCTGGGAAGGAGTGGCTTGCATCAATTCAAGAGTCACGGCACTGAGATTATCAACTATGGGCCTGAAAGGTAAACTTGGTGGTGACATTGGAGGCCTGACCGAACTAAAATCATTGGACCTTTCGTTCAATAAAGATCTCACTGGTTCAATCTCTCCAGCATTAGGGGATCTACAGAGTTTGAGTATCTTGATCCTGGCTGGGTGTGGCTTCAGTGGCAGTATTCCTGAACAACTGGGCAATCTTTCCAATCTATCCTTCTTGGCTTTAAACTCTAACAACTTCACTGGTTCCATACCGCCATCTCTTGGGAAACTCTCCAATCTCTATTGGCTGGACCTGGCAGATAATCAATTGACAGGTAGTCTCCCAGTCTCGACTTCCCAATCTTCTGGTTTGGACCTCCTTCTGAAGGCTAAACACTTTCATTTCAACAAAAACCAGTTGTCAGGTTCCATTTCACCTAAACTTTTTAGCTCTGAGATGGTATTAATACACATATTATTTGATGGAAATAATTTTTCTGGGAATATCCCACCGACACTGGGACTTGTTAAGACCCTTGAGGTTCTTCGACTAGATCGGAATTCTCTGACAGGATCTGTCCCATCAAATCTGAACAACCTAACAAATATCAATGAATTGAATTTAGCCAACAATAAGTTGACCGGTCCACTGCCAAACTTAACTCAAATGAGCTCACTAAATTACTTGGACCTTAGTAACAACTCATTTGATTCATCAGAAGCTCCAGAATGGTTCTCAAATCTACAATCTCTCACCACTCTGATCATTGAATTTGGGTCAATTCGCGGACCTGTGCCAGAAGGAGTGTTTAGCTTACCACAAATACAACAAATAAAATTGAAGAATAATGCATTTAGTGACACATTTAATATGGGTGACAAAGTCAGCGAACAGTTGCAGCTCGTTGATTTGCAAAATAACAATATTTCCCATTTTACCCTTGGTTCAAGATACACCAAAACTTTGATGCTTATAGGGAATCCTGTGTGTAGCACTGATGCTACCCTCTCAAATACAAACTACTGCCAAGTTCAAAATCAACCGGTCAAACCCTATTCAACCAGCCTTGCCAGTTGTTTAAGTAAATCATGTTCTCCAGATGAGAAGTTAAGTCCTCAGAGTTGTGAATGTGCCTATCCATTTGAAGGGACTTTATACTTTAGAGCACCCTCGTTCAGGGAATTGTCCAATGTGACTTTGTTTCATTCTTTGGAAATGAGCCTTTGGAAAAAACTGGACCTTACACCGGGTTCAGTTTCTATTCAAAACCCTTTCTTCAATGTTGATGATTATCTTCAGATGCAAATTGCACTTTTTCCACCAGACGGAAAGTATTTTAATAGGTCAGATATTCAGAGGATTGGGTTTGACTTGAGCAATCAAACCTACAAACCTCCCCCAGAATTTGGGCCATTTTATTTCATTGCATCTCCCTACGGTTTTGCAGGCACGGCTAGGGGAACTTCAATCAGCCCTGGAGTGATAATTGGGGTAGCTATTGGTTGTGCCTTCCTCATTCTAGGCCTCATTGGAGTTGGAATATATGCAATTCGGCAAAAGAAACGTGCAGAAAAGGCCATCGGGATGAGTCGGCCATTTGCTTCTTGGGCACCAAGTGGCAATGATAGTGGGGGCGCACCACAATTGAAGGGAGCCCGATGGTTTTCTTATGATGAACTTAAAAAATGCACAAATAATTTCTCCATGAGCAATGAGGTAGGATCTGGAGGATATGGCAAGGTATATAGAGGAATGCTTGTGGATGGACAAGCAGTTGCGATCAAAAGAGCTCAGCAAGGATCAATGCAAGGTGGCCTTGAGTTCAAGACGGAAATCGAACTGCTTTCACGAGTTCATCACAAGAACCTTCTTGGCCTCGTGGGATTTTGTTTTGAACAAGGAGAACAGATACTTGTTTATGAATTTATGCCTAATGGAACTCTTAGAGATAGCCTATCTGGAAAATCTGGTATCAATCTTGACTGGAAGAGAAGACTTCGTATTGCACTTGGGTCTGCCAGAGGATTGACTTACTTGCATGAACTTGCTAATCCTCCCATAATCCATAGAGACATTAAGTCCACCAATATTTTATTGGATGAACATTTAAATGCAAAAGTTGCAGATTTTGGCTTGTCCAAGCTTGTCTCAGACAGCGAAAAGGGACACGTTTCTACTCAAGTTAAAGGGACATTGGGTTATTTGGATCCCGAATATTACATGACTCAACAATTGACGGAGAAAAGTGATGTATATAGCTTTGGAGTTGTTATGTTGGAATTATTAACGGCTAAGCTGCCTATCGAGAAAGGAAAGTATGTAGTTCGTGAGGTGTGCATGTTGATGAATAAAAGTGAAGAAGAATATTATGGTCTGAAGCAGATAATGGATGTAACCATAATAAATAATACAACGACCATTATTGGGCTTGGAAGGTTCTTGGAGTTGGCCATGCAATGCGTTGAAGAATCAGCTGTAGATCGTCCCACAATGAGTGAAGTGGTCAAGGCAATTGAGAGTATTTTGCAGAATGATGGAATTAATACGAACACAACTTCTGCATCCTCGTCTGCAACTGACTTTGGGGCTTCCAGAACCGCTCCTAGGCATCCCTATAATGATTCTATACCAAAAAAGGATGCTAATGACAGCAATGCTTTTGATTACAGTGGTGGATACACTCATTCGACAAAAGTGGAGCCCAAATAG 2901 41.92 MSPVRTLLLFAFFYAGIDTTGSFTDPRDSAALESLKNEWQNTPPSWGASNDPCGAPWEGVACINSRVTALRLSTMGLKGKLGGDIGGLTELKSLDLSFNKDLTGSISPALGDLQSLSILILAGCGFSGSIPEQLGNLSNLSFLALNSNNFTGSIPPSLGKLSNLYWLDLADNQLTGSLPVSTSQSSGLDLLLKAKHFHFNKNQLSGSISPKLFSSEMVLIHILFDGNNFSGNIPPTLGLVKTLEVLRLDRNSLTGSVPSNLNNLTNINELNLANNKLTGPLPNLTQMSSLNYLDLSNNSFDSSEAPEWFSNLQSLTTLIIEFGSIRGPVPEGVFSLPQIQQIKLKNNAFSDTFNMGDKVSEQLQLVDLQNNNISHFTLGSRYTKTLMLIGNPVCSTDATLSNTNYCQVQNQPVKPYSTSLASCLSKSCSPDEKLSPQSCECAYPFEGTLYFRAPSFRELSNVTLFHSLEMSLWKKLDLTPGSVSIQNPFFNVDDYLQMQIALFPPDGKYFNRSDIQRIGFDLSNQTYKPPPEFGPFYFIASPYGFAGTARGTSISPGVIIGVAIGCAFLILGLIGVGIYAIRQKKRAEKAIGMSRPFASWAPSGNDSGGAPQLKGARWFSYDELKKCTNNFSMSNEVGSGGYGKVYRGMLVDGQAVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLLGLVGFCFEQGEQILVYEFMPNGTLRDSLSGKSGINLDWKRRLRIALGSARGLTYLHELANPPIIHRDIKSTNILLDEHLNAKVADFGLSKLVSDSEKGHVSTQVKGTLGYLDPEYYMTQQLTEKSDVYSFGVVMLELLTAKLPIEKGKYVVREVCMLMNKSEEEYYGLKQIMDVTIINNTTTIIGLGRFLELAMQCVEESAVDRPTMSEVVKAIESILQNDGINTNTTSASSSATDFGASRTAPRHPYNDSIPKKDANDSNAFDYSGGYTHSTKVEPK 966
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 37101359 37109660 + CePI673135_10g022930.1 Cec10g2293 215208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g2293 966 ProSiteProfiles Protein kinase domain profile. 631 906 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec10g2293 966 PANTHER RECEPTOR-LIKE PROTEIN 55 39 903 - -
Cec10g2293 966 Pfam Protein tyrosine and serine/threonine kinase 633 901 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec10g2293 966 MobiDBLite consensus disorder prediction 912 927 - -
Cec10g2293 966 CDD STKc_IRAK 637 905 - -
Cec10g2293 966 Gene3D Ribonuclease Inhibitor 219 283 IPR032675 -
Cec10g2293 966 FunFam Predicted protein 186 405 - -
Cec10g2293 966 SUPERFAMILY L domain-like 43 411 - -
Cec10g2293 966 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 707 919 - -
Cec10g2293 966 Gene3D Ribonuclease Inhibitor 25 218 IPR032675 -
Cec10g2293 966 SUPERFAMILY Protein kinase-like (PK-like) 616 916 IPR011009 -
Cec10g2293 966 Gene3D Transferase(Phosphotransferase) domain 1 707 930 - -
Cec10g2293 966 Gene3D Phosphorylase Kinase; domain 1 605 706 - -
Cec10g2293 966 FunFam Leucine-rich repeat protein kinase family protein 600 706 - -
Cec10g2293 966 FunFam Leucine-rich repeat family protein 27 183 - -
Cec10g2293 966 SMART serkin_6 631 906 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec10g2293 966 MobiDBLite consensus disorder prediction 912 966 - -
Cec10g2293 966 ProSitePatterns Serine/Threonine protein kinases active-site signature. 751 763 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec10g2293 966 ProSitePatterns Protein kinases ATP-binding region signature. 637 659 IPR017441 GO:0005524(InterPro)
Cec10g2293 966 Gene3D Ribonuclease Inhibitor 284 423 IPR032675 -
Cec10g2293 966 Pfam Leucine Rich Repeat 243 264 IPR001611 GO:0005515(InterPro)
Cec10g2293 966 Pfam Leucine Rich Repeat 139 161 IPR001611 GO:0005515(InterPro)
Cec10g2293 966 Pfam Leucine Rich Repeat 289 312 IPR001611 GO:0005515(InterPro)
Cec10g2293 966 Pfam Leucine Rich Repeat 115 137 IPR001611 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec07g0474 Cec-Chr7:5069643 Cec10g2293 Cec-Chr10:37101359 4.70E-57 dispersed
Cec10g1331 Cec-Chr10:27598337 Cec10g2293 Cec-Chr10:37101359 0.00E+00 dispersed
Cec10g2293 Cec-Chr10:37101359 Cec11g0552 Cec-Chr11:6039190 2.60E-70 dispersed
Cec02g0002 Cec-Chr2:32164 Cec10g2293 Cec-Chr10:37101359 5.30E-241 transposed
Cec10g2293 Cec-Chr10:37101359 Cec04g0749 Cec-Chr4:26760230 2.40E-92 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72368 PF07714 PK_Tyr_Ser-Thr 1.50E-46 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g2293 - - - 0.0