Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec11g0010 | ATGGATCTGACTACTCAAGATCCTCCTATCCCCATCCCTATTCCCATCCCCTTAAATAGTCGTTACGGCGGCCACGACCATGACCATATCATCCACCACCACCATGACCCCTCTGCCACCCGCAACCACATCATCGCGGCCACCATCAATGGTGGAAGCCCACTTCCAACCTCTCAAATGGAAGTTGACCTTCACCACCATAACAACAATAACAATAACAACAGCGGCAACAACAACAAGAAGCATATCAAATACAAAGAATGTCTCAAAAACCATGCAGCTTCCATGGGAGGCAATGCTACGGATGGCTGCGGCGAGTTTATGCCGAGTGGAGAAGAAGGCTCCATTGAAGCCCTCACATGCTCGGCTTGCAACTGTCATAGAAACTTCCATCGAAAAGAGATCGAAGGAGAATCCTACGATTGGCTTCACCCCTCTCGCCTCGGGCGGAAGCTACTCGTCGGTGGAAAGAACATGATCGCCCCACCAGAGGCTGCCGCATTCGCATACCCAACCCCTACTGGGGCGGCGTTCATATCATCAAGAGCAGCAACAGCACAACCCCACCACATGATAATGTCGTACAACATGCTCGGTGGGGGCGGCGGGCACTCGGAGTCGGAGGAGCAGGAGGAGGCGACAGGGGCAGGGGTCGGGGGAAGGGTGTATTCAGGGCCGATGATGAACAAGAAGCGATTCCGAACGAAGTTCACGGTGGAGCAGAAGGAGAAGATGCTGAGGTTTGCAGAGAAAGTTGGATGGAAGATTCAAAAGCAAGAGGAGAGTGTGGTGCAGCAATTCTGTCAAGAGATTGGAGTGAAGAGAAGAGTTCTTAAGGTTTGGATGCATAACAACAAGCATAATCTTGCCAAGAAGGATATAATTTCCCCTTCCCATTCTCCTAATCCCTTAAATTAA | 918 | 50.87 | MDLTTQDPPIPIPIPIPLNSRYGGHDHDHIIHHHHDPSATRNHIIAATINGGSPLPTSQMEVDLHHHNNNNNNNSGNNNKKHIKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTCSACNCHRNFHRKEIEGESYDWLHPSRLGRKLLVGGKNMIAPPEAAAFAYPTPTGAAFISSRAATAQPHHMIMSYNMLGGGGGHSESEEQEEATGAGVGGRVYSGPMMNKKRFRTKFTVEQKEKMLRFAEKVGWKIQKQEESVVQQFCQEIGVKRRVLKVWMHNNKHNLAKKDIISPSHSPNPLN | 305 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 170889 | 171806 | + | CePI673135_11g000100.1 | Cec11g0010 | 215222 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec11g0010 | 305 | NCBIfam | homeobox domain, ZF-HD class | 230 | 286 | IPR006455 | - | |
Cec11g0010 | 305 | ProSiteProfiles | Zinc-finger ZF-HD dimerization-type profile. | 85 | 134 | IPR006456 | - | |
Cec11g0010 | 305 | PANTHER | ZINC-FINGER HOMEODOMAIN PROTEIN 2 | 67 | 288 | - | GO:0000976(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0050793(PANTHER) | |
Cec11g0010 | 305 | Gene3D | - | 220 | 292 | - | - | |
Cec11g0010 | 305 | Pfam | ZF-HD protein dimerisation region | 83 | 135 | IPR006456 | - | |
Cec11g0010 | 305 | SUPERFAMILY | Homeodomain-like | 223 | 291 | IPR009057 | - | |
Cec11g0010 | 305 | FunFam | Zinc-finger homeodomain protein 2 | 220 | 291 | - | - | |
Cec11g0010 | 305 | MobiDBLite | consensus disorder prediction | 201 | 221 | - | - | |
Cec11g0010 | 305 | NCBIfam | ZF-HD homeobox protein Cys/His-rich dimerization domain | 84 | 135 | IPR006456 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec04g1544 | Cec-Chr4:34928549 | Cec11g0010 | Cec-Chr11:170889 | 6.40E-47 | dispersed | |
Cec05g2662 | Cec-Chr5:37235934 | Cec11g0010 | Cec-Chr11:170889 | 1.20E-31 | dispersed | |
Cec08g1176 | Cec-Chr8:23624466 | Cec11g0010 | Cec-Chr11:170889 | 4.40E-46 | dispersed | |
Cec09g1936 | Cec-Chr9:36246808 | Cec11g0010 | Cec-Chr11:170889 | 2.10E-34 | dispersed | |
Cec09g1937 | Cec-Chr9:36258856 | Cec11g0010 | Cec-Chr11:170889 | 4.80E-17 | dispersed | |
Cec10g0867 | Cec-Chr10:18775665 | Cec11g0010 | Cec-Chr11:170889 | 8.60E-37 | dispersed | |
Cec10g1514 | Cec-Chr10:29555252 | Cec11g0010 | Cec-Chr11:170889 | 4.20E-35 | dispersed | |
Cec11g0010 | Cec-Chr11:170889 | Cec08g1547 | Cec-Chr8:27126900 | 2.90E-47 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
30473 | PF04770 | ZF-HD_dimer | 4.60E-29 | No_clan | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec11g0010 | - | - | - | 0.0 |