Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g0010 ATGGATCTGACTACTCAAGATCCTCCTATCCCCATCCCTATTCCCATCCCCTTAAATAGTCGTTACGGCGGCCACGACCATGACCATATCATCCACCACCACCATGACCCCTCTGCCACCCGCAACCACATCATCGCGGCCACCATCAATGGTGGAAGCCCACTTCCAACCTCTCAAATGGAAGTTGACCTTCACCACCATAACAACAATAACAATAACAACAGCGGCAACAACAACAAGAAGCATATCAAATACAAAGAATGTCTCAAAAACCATGCAGCTTCCATGGGAGGCAATGCTACGGATGGCTGCGGCGAGTTTATGCCGAGTGGAGAAGAAGGCTCCATTGAAGCCCTCACATGCTCGGCTTGCAACTGTCATAGAAACTTCCATCGAAAAGAGATCGAAGGAGAATCCTACGATTGGCTTCACCCCTCTCGCCTCGGGCGGAAGCTACTCGTCGGTGGAAAGAACATGATCGCCCCACCAGAGGCTGCCGCATTCGCATACCCAACCCCTACTGGGGCGGCGTTCATATCATCAAGAGCAGCAACAGCACAACCCCACCACATGATAATGTCGTACAACATGCTCGGTGGGGGCGGCGGGCACTCGGAGTCGGAGGAGCAGGAGGAGGCGACAGGGGCAGGGGTCGGGGGAAGGGTGTATTCAGGGCCGATGATGAACAAGAAGCGATTCCGAACGAAGTTCACGGTGGAGCAGAAGGAGAAGATGCTGAGGTTTGCAGAGAAAGTTGGATGGAAGATTCAAAAGCAAGAGGAGAGTGTGGTGCAGCAATTCTGTCAAGAGATTGGAGTGAAGAGAAGAGTTCTTAAGGTTTGGATGCATAACAACAAGCATAATCTTGCCAAGAAGGATATAATTTCCCCTTCCCATTCTCCTAATCCCTTAAATTAA 918 50.87 MDLTTQDPPIPIPIPIPLNSRYGGHDHDHIIHHHHDPSATRNHIIAATINGGSPLPTSQMEVDLHHHNNNNNNNSGNNNKKHIKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTCSACNCHRNFHRKEIEGESYDWLHPSRLGRKLLVGGKNMIAPPEAAAFAYPTPTGAAFISSRAATAQPHHMIMSYNMLGGGGGHSESEEQEEATGAGVGGRVYSGPMMNKKRFRTKFTVEQKEKMLRFAEKVGWKIQKQEESVVQQFCQEIGVKRRVLKVWMHNNKHNLAKKDIISPSHSPNPLN 305
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 170889 171806 + CePI673135_11g000100.1 Cec11g0010 215222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g0010 305 NCBIfam homeobox domain, ZF-HD class 230 286 IPR006455 -
Cec11g0010 305 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 85 134 IPR006456 -
Cec11g0010 305 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 67 288 - GO:0000976(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0050793(PANTHER)
Cec11g0010 305 Gene3D - 220 292 - -
Cec11g0010 305 Pfam ZF-HD protein dimerisation region 83 135 IPR006456 -
Cec11g0010 305 SUPERFAMILY Homeodomain-like 223 291 IPR009057 -
Cec11g0010 305 FunFam Zinc-finger homeodomain protein 2 220 291 - -
Cec11g0010 305 MobiDBLite consensus disorder prediction 201 221 - -
Cec11g0010 305 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 84 135 IPR006456 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g1544 Cec-Chr4:34928549 Cec11g0010 Cec-Chr11:170889 6.40E-47 dispersed
Cec05g2662 Cec-Chr5:37235934 Cec11g0010 Cec-Chr11:170889 1.20E-31 dispersed
Cec08g1176 Cec-Chr8:23624466 Cec11g0010 Cec-Chr11:170889 4.40E-46 dispersed
Cec09g1936 Cec-Chr9:36246808 Cec11g0010 Cec-Chr11:170889 2.10E-34 dispersed
Cec09g1937 Cec-Chr9:36258856 Cec11g0010 Cec-Chr11:170889 4.80E-17 dispersed
Cec10g0867 Cec-Chr10:18775665 Cec11g0010 Cec-Chr11:170889 8.60E-37 dispersed
Cec10g1514 Cec-Chr10:29555252 Cec11g0010 Cec-Chr11:170889 4.20E-35 dispersed
Cec11g0010 Cec-Chr11:170889 Cec08g1547 Cec-Chr8:27126900 2.90E-47 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30473 PF04770 ZF-HD_dimer 4.60E-29 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g0010 - - - 0.0