Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec11g0021 | ATGGTGTTCCAAGATTTCGACCAAATCTCTGAACGCCGACGAGCCGAGAGGGCACGTAAGTTTCGAAAACGAGTCACCATTGCTGTGGTCTCGGCCTCTGTGATCCTCCTCGTCGTTGCTGCCGCTGTGTTCGTCCAGGTCTCCTCCTCCTCCAAGTCCACCACCAAAAATGGCGATAGCAAGAGTAGTGGCAACTCTAAACAACCCGTGCCACCCGACACGAAACAAGTGTCGCGCATCGAGAAAATGATTACCATGATATGCAACTCGACAGACTACAAAGGCAAATGCGAGAGCACTCTAAAGGATGGCGTCCACACGGATCCTGATTCCTCGGACCCGAAAGACCTCATCAAGCTGGCAATCTCGGCTGCGGCGGATGAGGTCAAATCTGCAGTGAAAAAGGCGTCGGGGTTCAACTTCGCGACGCCGGAGGAAAAGGGGGCGTTCGAGGACTGCAAGGTGCTGTTGGAAGACGCTGTGGAGGAATTGGAGATGTCTATGAGCGAAGTGAGCAAGAAGAATATGGGAAAGCTGACGGCGAAAACGACGCCGGATCTGAATAACTGGCTAAGTGCGGTGATGTCGTATCATGAAACTTGTGTTGATGGGTTCCCAGAGGGGAAGATGAAGACCGAAATGGAGAAGGCAGTGAAGGCTGGAAAGGAACTCACCAGTAATTCCTTGGCGATGATATCGCAGGTGGCTTCCTTTTTCTCCACGTTCGAGATGCCTGAGGGAGCTGCAACACGACGTCGTCTCATGGCCAACGGTGGGGTGCCAACTTGGATGAATAGCAATGAGCGAAGGATGTTGAAGGGCGCTTCTGCTGGGGTTAAGCCCAAGCCTAACGTTGTGGTCGCCAAAGATGGGTCTGGAGATTTCAAAACTATTAATGAAGCCTTGGCCAAGATGCCTGCCAAATATGATGGACGGTATGTGATCTATGTGAAGGAAGGAATCTACGAAGAGACGGTGGTGATTACGAAAAAGATGGCGAATGTTACAATGTACGGAGATGGTTCTCAAAAGAGCATGATAAGTGGGAGCAAGAACTTTGTGGATGGAGTCAGAACCTTCCAAACCGCAACATTTGTGGCACTTGGAGAGGGCTTCTTGGGGCAAGGCATGGGATTCAGAAACACAGCGGGTCCTGAAAAGCACCAAGCCGTAGCAGCGAGAGTCCAAGCAGACCGAGCCATATTTGTGAACTGCCGGTTCGAGGGGTACCAGGACACGTTATACGCCCAAGCCCATCGCCAGTTCTACAGAAGCTGTCTGATAACAGGCACCATCGACTTCATCTTCGGTGACGCCGCTGCCATTTTCCAAAACTGCAACATGATGCTCAGAAAGCCCTTAGACAACCAACAGAACATAGTCACAGCACAGGGCAGGACTGACAAGCATGAAACCACAGGCATAGTCCTCCAAAACTGCAAAATTTTGCCCGACAAGACGTTGGAGCCTGTGAAGTCCCAATTCAAAAGCTACTTGGGGAGGCCTTGGAAAGAGTTCTCTAGAACCATTGTAATGGAGTCCACCATTGAAGATATCATTCATCCCGATGGCTGGATGCCTTGGGAAGGAGATTTTGCACTCAAAACCTTGTACTATGCTGAATTTAACAACCAAGGCCCTGGGGCTAAGACCGATGCCAGGGTCAAATGGCCTGGCTACAAGGTGATTGATAAGGACGAGGCTGCAAAGTTTACCATAGGAACTTTTCTAGAGCTGGATTGGATCGAGAGCTCCTCCGCTCCTGTTCATGTCGGCCTATTTTGA | 1785 | 50.59 | MVFQDFDQISERRRAERARKFRKRVTIAVVSASVILLVVAAAVFVQVSSSSKSTTKNGDSKSSGNSKQPVPPDTKQVSRIEKMITMICNSTDYKGKCESTLKDGVHTDPDSSDPKDLIKLAISAAADEVKSAVKKASGFNFATPEEKGAFEDCKVLLEDAVEELEMSMSEVSKKNMGKLTAKTTPDLNNWLSAVMSYHETCVDGFPEGKMKTEMEKAVKAGKELTSNSLAMISQVASFFSTFEMPEGAATRRRLMANGGVPTWMNSNERRMLKGASAGVKPKPNVVVAKDGSGDFKTINEALAKMPAKYDGRYVIYVKEGIYEETVVITKKMANVTMYGDGSQKSMISGSKNFVDGVRTFQTATFVALGEGFLGQGMGFRNTAGPEKHQAVAARVQADRAIFVNCRFEGYQDTLYAQAHRQFYRSCLITGTIDFIFGDAAAIFQNCNMMLRKPLDNQQNIVTAQGRTDKHETTGIVLQNCKILPDKTLEPVKSQFKSYLGRPWKEFSRTIVMESTIEDIIHPDGWMPWEGDFALKTLYYAEFNNQGPGAKTDARVKWPGYKVIDKDEAAKFTIGTFLELDWIESSSAPVHVGLF | 594 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 306833 | 308883 | + | CePI673135_11g000210.1 | Cec11g0021 | 215233 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec11g0021 | 594 | Pfam | Pectinesterase | 284 | 578 | IPR000070 | GO:0030599(InterPro)|GO:0042545(InterPro) | |
Cec11g0021 | 594 | FunFam | Pectinesterase | 80 | 236 | - | - | |
Cec11g0021 | 594 | CDD | PMEI-like_3 | 87 | 237 | - | - | |
Cec11g0021 | 594 | SMART | PMEI_2 | 79 | 231 | IPR006501 | GO:0004857(InterPro) | |
Cec11g0021 | 594 | MobiDBLite | consensus disorder prediction | 51 | 73 | - | - | |
Cec11g0021 | 594 | SUPERFAMILY | Pectin lyase-like | 280 | 578 | IPR011050 | - | |
Cec11g0021 | 594 | Coils | Coil | 154 | 174 | - | - | |
Cec11g0021 | 594 | NCBIfam | pectinesterase inhibitor domain | 81 | 235 | IPR006501 | GO:0004857(InterPro) | |
Cec11g0021 | 594 | ProSitePatterns | Pectinesterase signature 2. | 428 | 437 | IPR033131 | - | |
Cec11g0021 | 594 | PANTHER | PECTINESTERASE | 26 | 584 | - | GO:0030599(PANTHER)|GO:0046910(PANTHER) | |
Cec11g0021 | 594 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 80 | 236 | IPR035513 | - | |
Cec11g0021 | 594 | MobiDBLite | consensus disorder prediction | 51 | 76 | - | - | |
Cec11g0021 | 594 | SUPERFAMILY | Plant invertase/pectin methylesterase inhibitor | 82 | 235 | IPR035513 | - | |
Cec11g0021 | 594 | Pfam | Plant invertase/pectin methylesterase inhibitor | 83 | 231 | IPR006501 | GO:0004857(InterPro) | |
Cec11g0021 | 594 | Gene3D | - | 278 | 593 | IPR012334 | - | |
Cec11g0021 | 594 | FunFam | Pectinesterase | 278 | 593 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec01g0725 | Cec-Chr1:8024767 | Cec11g0021 | Cec-Chr11:306833 | 1.70E-141 | dispersed | |
Cec01g0726 | Cec-Chr1:8031467 | Cec11g0021 | Cec-Chr11:306833 | 2.10E-136 | dispersed | |
Cec05g0742 | Cec-Chr5:6111351 | Cec11g0021 | Cec-Chr11:306833 | 3.00E-135 | dispersed | |
Cec10g0006 | Cec-Chr10:119820 | Cec11g0021 | Cec-Chr11:306833 | 5.50E-101 | dispersed | |
Cec11g0021 | Cec-Chr11:306833 | Cec11g1504 | Cec-Chr11:29244139 | 3.50E-81 | dispersed | |
Cec11g0021 | Cec-Chr11:306833 | Cec06g0498 | Cec-Chr6:5588404 | 8.40E-136 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec11g0021 | - | - | - | 0.0 |