Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g0040 ATGGAAGATCAGAATAGTTTGAAATCACGGTGGCGTTTACGTTACTGCTATGCACATGGAGGAATAGCTGCCGGGGAAAGTCGTGGTTATCCAAGAATTGGTGAACATATGGAGCATGGAGATCGAATTGAAGAAGGTAGCTCCAGATTGCTGCGGGGCAATAGCGTTGCTGGGAGTAGTAATGATTACAGGTGGGTTGACGGTAGTGAAGTCGACTCCGAATCGCCTCCATGGTCGCTGTTTGAAGAAAGAGAGAGCGGGGAAGGATATGGATCTATCAGAAGGAGGTTAATTAAGAAGCCCAAGAGAGTTGATTCTTTTGATGTTGAAGCAATGGAGATTGCCGGTGCCAACTATCACCATTTAAAGGATGTTTCCCTTTGGCAAACTATTGCTATAGCATTTCAAACACTTGGTGTTGTGTATGGTGACATGGGTACAAGTCCATTATACGTCTTTGCTGATGTATTTAGCAAGGTGCATATTGAGGCAGATGTTGATGTCTTGGGGGCTCTTTCCTTAGTGATTTATACAATTGCTCTTATTCCTTTGGCAAAATATGTTTTTGTAGTGCTCAGAGCCAACGACAATGGGGAAGGAGGAACATTTGCATTGTATTCGCTTATCTGTAGGTATGCCAAAGTTAACATGCTGCCAAACCGTCAGCCAGCTGACGAACATATCTCAAGTTTTAAGCTTAAACTTCCCACTCCAGAGTTGGAAAGGGCCTTACATATCAAAGAGACTCTGGAGAAGAGATCATCCCTGAAAACTCTTATATTGCTGTTGGTTCTCATGGGCACTTCAATGATTATTGGGGATGGTATTCTAACCCCAGCAATATCAGTGATGTCTGCTGTGAGTGGTCTGCAGGGACAAATAAAGTCATTTGATACAAATGCTGTGGTTATTGTTTCAATTATAATCCTTGTGGCCTTGTTCAGCATACAGAAATTTGGAACTGGGAAAGTAGGATTTATGTTTGCTCCTGTCCTTGCTTTGTGGTTTTTTAGTTTGGGATCTATTGGAATTTACAATGTAGTGAAGTATGATCCCACCGTTGTAAGGGCTCTCAATCCCACTTACATCTATTTATTCTTCAAGAAAAATTCAAAAAATGCATGGTCAGCTCTCGGTGGTTGTGTTTTGTGCGTAACAGGAGCTGAAGCCATGTTCGCCGATCTTGGCCATTTCACTGTGCCAGCCATACAGATTGCTTTCACATGTGTTGTTTTCCCCTGCCTTCTCTTCGCATACATGGGCCAGGCTGCATACCTTTTGAAACATCCAGATTCTGCAGCAAGAATATTTTATGATTCTGTGCCAGCAAGTCTTTTTTGGCCGGTCTTTGTGACAGCAACACTTGCTGCTATGATTGCAAGCCAAGCAATGATTTCTGCAACCTTTTCTTGTGTCAAGCAATCTATGGCTCTTGGATGTTTTCCAAGAATGAAGATAGTTCACACCTCTAAGAGACGAATGGGTCAAATTTACATCCCTGTGATCAATTGGTTTTTGATGATAATGTGCATATTTGTCGTTGCAATATTTCGAAGGACTACAGACATCGCCAATGCTTATGGTATTGCTGAAGTTGGTGTGATGTTGGTGAGCACTGTCCTGGTGACTCTAGTAATGCTCCTAATCTGGCAGACAAATTTGTTTCTTGCGTTTTGTTTCCCACTTGTATTTGGGTCAGTGGAAGTTATCTACTTATCTGCAGTTCTATCAAAAATCAGAGAGGGTGGATGGTTGCCACTTGCTTTTGCTTCCGTCTTCCTCTCTGTGATGTACACATGGAACTATGGGAGTGTGTTGAAGTACCAAAGTGAGGTGAGAGACAAAATATCAACGGATTTCTTGCTTGAACTGGGTTCTACACTTGGAACTGTAAGAGTTCCAGGAATTGGTCTCCTGTACAATGAGCTTGTCCAAGGCATTCCTGCAATTTTTGGGCAATTTCTTCTTAGCCTTCCAGCCATCCACTCCACAATTGTGTTTGTGTGCATTAAATATGTTCCAATCCCCGTGGTTCCACAAGAGGAAAGGTTTTTGTTTAGGAGGGTTGGCCCAAAAGATTACCATATGTTCCGTTGCATCGCAAGATATGGTTACAAGGATGTGCGGAAGGAAGATCACCATGCGTTTGAGCAACTTTTGATGGAAAGCCTCGAGAAGTTCTTAAGAAAGGAGTCTCAAGAACTTGCCCTGGAGAGCAATTTGAATGAGTTGCAATTCGACAATATTTCAGAGAGGTCGCGGGATTCTCCATCTCGAGGTGCTGCTGATGTGAATGAGGAGCTGAGAATTCCATTGATGGAACAGGAAAGAACTGTGGATTCGGAAGAAGGTTATGGGGTGCGGTTGCCATCCAGCATTATGGCATCAGATGACGACCCTAGTTTGGAGTATGAGCTATCAGCCCTTCGGGAAGCAATGGATTCAGGATTTACGTATCTATTGGCCCAAGGGGACGTTCGAGCAAAGAAAAACTCATTTTTTGTTAAGAAGCTTGTTATAAACTATTTCTATGCATTCCTAAGGAGGAACTGTAGGGGTGGTGCAGCAACAATGCGAGTTCCTCACATGAACATTATGCAAGTTGGGATGACTTACATGGTTTGA 2625 42.9 MEDQNSLKSRWRLRYCYAHGGIAAGESRGYPRIGEHMEHGDRIEEGSSRLLRGNSVAGSSNDYRWVDGSEVDSESPPWSLFEERESGEGYGSIRRRLIKKPKRVDSFDVEAMEIAGANYHHLKDVSLWQTIAIAFQTLGVVYGDMGTSPLYVFADVFSKVHIEADVDVLGALSLVIYTIALIPLAKYVFVVLRANDNGEGGTFALYSLICRYAKVNMLPNRQPADEHISSFKLKLPTPELERALHIKETLEKRSSLKTLILLLVLMGTSMIIGDGILTPAISVMSAVSGLQGQIKSFDTNAVVIVSIIILVALFSIQKFGTGKVGFMFAPVLALWFFSLGSIGIYNVVKYDPTVVRALNPTYIYLFFKKNSKNAWSALGGCVLCVTGAEAMFADLGHFTVPAIQIAFTCVVFPCLLFAYMGQAAYLLKHPDSAARIFYDSVPASLFWPVFVTATLAAMIASQAMISATFSCVKQSMALGCFPRMKIVHTSKRRMGQIYIPVINWFLMIMCIFVVAIFRRTTDIANAYGIAEVGVMLVSTVLVTLVMLLIWQTNLFLAFCFPLVFGSVEVIYLSAVLSKIREGGWLPLAFASVFLSVMYTWNYGSVLKYQSEVRDKISTDFLLELGSTLGTVRVPGIGLLYNELVQGIPAIFGQFLLSLPAIHSTIVFVCIKYVPIPVVPQEERFLFRRVGPKDYHMFRCIARYGYKDVRKEDHHAFEQLLMESLEKFLRKESQELALESNLNELQFDNISERSRDSPSRGAADVNEELRIPLMEQERTVDSEEGYGVRLPSSIMASDDDPSLEYELSALREAMDSGFTYLLAQGDVRAKKNSFFVKKLVINYFYAFLRRNCRGGAATMRVPHMNIMQVGMTYMV 874
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 543709 549520 + CePI673135_11g000400.1 Cec11g0040 215252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g0040 874 NCBIfam potassium uptake protein 133 873 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cec11g0040 874 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 115 874 IPR003855 GO:0006813(PANTHER)|GO:0015079(InterPro)|GO:0015079(PANTHER)|GO:0016020(InterPro)|GO:0016020(PANTHER)|GO:0071805(InterPro)
Cec11g0040 874 Pfam K+ potassium transporter integral membrane domain 134 621 IPR053951 -
Cec11g0040 874 Pfam K+ potassium transporter C-terminal domain 634 872 IPR053952 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec09g0590 Cec-Chr9:5088064 Cec11g0040 Cec-Chr11:543709 1.30E-181 dispersed
Cec09g2001 Cec-Chr9:37017380 Cec11g0040 Cec-Chr11:543709 1.80E-186 dispersed
Cec10g0935 Cec-Chr10:20610313 Cec11g0040 Cec-Chr11:543709 1.30E-92 dispersed
Cec10g1456 Cec-Chr10:28900416 Cec11g0040 Cec-Chr11:543709 8.50E-189 dispersed
Cec11g0040 Cec-Chr11:543709 Cec10g1075 Cec-Chr10:23827252 6.70E-190 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g0040 K03549 - csv:101202804 1514.59