Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g0058 ATGGCCGTTGAAGCTATGGTCAGTACAGGGGAGAAAGGGTCGTCAGAGCTATGGTTGGGGCAGGGAGAAAGGGTTGTTAGATCTATGGTCGGGGGTGTCATTCCCAAAACATTTTCAAATCTAACAAATCTGCAGACAGTATGGGCATCAGACAACGAACTCACCGGAGAAATACCTGGATTCATTGGGAGTTGGTTAAAACTCAGAACTTTGAGGTTTCAAGGAAACTCTTTCATGGGTCCCATACCATTGACACTTTCAAAATTGACAGCTCTGAATGAGTTGAGAATAAGTGATATGTCAAACGGGGGCTCTTCCCTAGAATTTATCAGGAATATGACGTCTTTGAAGACCCTAGTTTTGAGAAATAATAAAATATCAGATTCAATTCATTCCTACACTAGAGAGTTTGAAGAATTGAGCCTGCTAGACTTGAGTTTCAACATGTTAAAGGGAGATATTCCAAAGTGGCTTTTCAAGTTGAATAGTCTGTCATACTTGCTTCTTGGAAACAACAAGTTAACGGGCACACTACCTTCAGAGAAGTCTGACTCTCTTCTTTTTATAGACTTATCATACAATGCTTTATCAGGGGCCTTTCCTGACTGGGTCGATGGTTCAACCTTACAGTTAAATTTAGTTGCCAACAACTTCTCGTCAGGCAGTGCGAAAAGCAGCTATTTGCCTTCGGGTTTGGACTGTCTTCAACGAGAATTTTCTTGTAATGTATCTTCTGAACACCGTGAGTTAAGATCTAGTTTTGGGATCAACTGTGGAGGTGGAAAATTTGTGAGTGCCTCTGGGGGCCAGTATGAAAGGGAAAATGCGATTGTTGGTGCAGCAGCTTCATATTATGTTAGTGACTCGGAAACTTGGGCTGTTAGTGATGTCGGATACTTCCCTAAAAACACCAAAAGCTCTAGTAACTCTAGTAGTTATAACAGAGACAATGACACGACAGAATATATATTTGCAAATACAAGTGACTCAGAACTTTTTCAGACACAAGAATTATCTACTTCATCATTGAGGTTTTACGGACTAGAGCTTAAAAACGGGAACTACACTGTCAACCTTCAGTTTGCAGAACATGCATTCTCCAATTTATCTACATGGAGCAGCCTTGGGAGGCGCGTCTTTGATATATATATTCAGGGGAAACTTGTCCACAAGGATTTTAGTATTCAAAATGAGGCGGGTGGGTCTTTACGCGCTATTTCAAAGCCATTTAAGACACAAGTTTCAAAAAACTACATGGAAATCCATCTTTTTTGGGCTGGGAAAGGTACTTGCTGCATACCTGAAGAAGGTACTTTTGGTCCTTCTATTTCGGCAATCATTGCAAGTCTAGATTCGGAGCCTGGAAGTAATGAGAAGAATGGAACCAGTCAAATAAAGGTGACTAGTAGTAAGAAGAATGGAGCCAGTCTAATAGTGGGGATTGTTGTTGGTGTAGGATCTGTTTGCTTTCTAATTGTCACAATTTCCATTCTTTTCCATAGAAGGAAAGGTCGTTCCTCTGAAGGTGAAGAGCTCTTTGGAACTGATGAAAGACCACACACTTATAGTTATTCTGAACTAAGGAATGCTACAGAAGGTTTTAGTTCGTCCAACAAGCTTGGAGAAGGGGGGTTTGGACCTGTTTACAAGGGAATACTGAATGATGGAAGAGTAATTGCTGTAAAGCAACTATCTGTAAAATCTGACCAAGGAAGGAACCAGTTTGTGGCTGAGATTTCTATAATATCCGCCGTGCAACATCGCAACCTTGTGAAGTTGCATGGGTGTTGCATTGAGGACCACAATCGTCTCCTTGTTTATGAGTACCTGGAGAAAGGGAGTCTGGACCAAGCATTATTTGGAAAAAGAAACTTCACTCTTGATTGGCCGAAACGATTTGATATATGCTTGGGTGTGGCGAGAGGTCTGACTTATCTTCATGAGGAATCAAGGCTTCGAATTGTTCATAGAGATGTTAAAGCCAGTAACATTCTACTTGATGCTGATCTGAACCCCAAAATTTCAGATTTTGGTTTAGCAAAACTTTATGATGACAAAAAGACTCATATTAGCACCCTTGTTGCTGGGACAATTGGATATCTTGCACCCGAGTATGCCATGCGTGGCCATCTGACTGAGAAGGCTGATGTTTTTAGTTTTGGCGTTGTGGCACTTGAAATTGTCAGTGGTAGGCCAAATTCAGACCGAAGCTTGGAGGACAATGTTTTTCTTCTTGAATTGGCTTGGTACCTCTATGAAAACAATCGTGAAATCGAGTTGCTGGATTCAGATTTGTCGACATTCAATGAGGACGAAGTAAAGCGAGTGATCAGAGTAGGTCTTATGTGCACTCAAACATCCCCAGCTCGGCGACCATCAATGTCACGTGTGGTGGCAATGTTGTGTGGAGATACTGAAGTGGCTGCTATTACTTCAAAGCCAGGATACTTAACTGAATGGACCTTCGATGACGTAGTCACTTCTGCAAATGATACAACTATAGAAGGATCCAGCACTACCCATGAAGGCTCTTCAATCGGCCATCAATGTCAAGCTCCAAAGCCGCCATCGTCCAACCCTCCTCCACCATCCCAGGATGAGCTCAAGTGA 2610 41.99 MAVEAMVSTGEKGSSELWLGQGERVVRSMVGGVIPKTFSNLTNLQTVWASDNELTGEIPGFIGSWLKLRTLRFQGNSFMGPIPLTLSKLTALNELRISDMSNGGSSLEFIRNMTSLKTLVLRNNKISDSIHSYTREFEELSLLDLSFNMLKGDIPKWLFKLNSLSYLLLGNNKLTGTLPSEKSDSLLFIDLSYNALSGAFPDWVDGSTLQLNLVANNFSSGSAKSSYLPSGLDCLQREFSCNVSSEHRELRSSFGINCGGGKFVSASGGQYERENAIVGAAASYYVSDSETWAVSDVGYFPKNTKSSSNSSSYNRDNDTTEYIFANTSDSELFQTQELSTSSLRFYGLELKNGNYTVNLQFAEHAFSNLSTWSSLGRRVFDIYIQGKLVHKDFSIQNEAGGSLRAISKPFKTQVSKNYMEIHLFWAGKGTCCIPEEGTFGPSISAIIASLDSEPGSNEKNGTSQIKVTSSKKNGASLIVGIVVGVGSVCFLIVTISILFHRRKGRSSEGEELFGTDERPHTYSYSELRNATEGFSSSNKLGEGGFGPVYKGILNDGRVIAVKQLSVKSDQGRNQFVAEISIISAVQHRNLVKLHGCCIEDHNRLLVYEYLEKGSLDQALFGKRNFTLDWPKRFDICLGVARGLTYLHEESRLRIVHRDVKASNILLDADLNPKISDFGLAKLYDDKKTHISTLVAGTIGYLAPEYAMRGHLTEKADVFSFGVVALEIVSGRPNSDRSLEDNVFLLELAWYLYENNREIELLDSDLSTFNEDEVKRVIRVGLMCTQTSPARRPSMSRVVAMLCGDTEVAAITSKPGYLTEWTFDDVVTSANDTTIEGSSTTHEGSSIGHQCQAPKPPSSNPPPPSQDELK 869
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 733511 755191 - CePI673135_11g000580.1 Cec11g0058 215270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g0058 869 Gene3D - 252 449 - -
Cec11g0058 869 SUPERFAMILY L domain-like 32 219 - -
Cec11g0058 869 Gene3D Transferase(Phosphotransferase) domain 1 610 813 - -
Cec11g0058 869 MobiDBLite consensus disorder prediction 833 869 - -
Cec11g0058 869 FunFam Putative LRR receptor-like serine/threonine-protein kinase 103 226 - -
Cec11g0058 869 SUPERFAMILY Protein kinase-like (PK-like) 516 801 IPR011009 -
Cec11g0058 869 FunFam Putative LRR receptor-like serine/threonine-protein kinase 610 813 - -
Cec11g0058 869 ProSitePatterns Serine/Threonine protein kinases active-site signature. 654 666 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec11g0058 869 Gene3D Phosphorylase Kinase; domain 1 497 609 - -
Cec11g0058 869 Pfam Protein tyrosine and serine/threonine kinase 537 800 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec11g0058 869 ProSiteProfiles Protein kinase domain profile. 534 807 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g0058 869 MobiDBLite consensus disorder prediction 833 853 - -
Cec11g0058 869 FunFam Leucine-rich repeat receptor-like protein kinase 503 609 - -
Cec11g0058 869 Pfam Malectin domain 254 446 IPR021720 -
Cec11g0058 869 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 28 825 IPR051824 GO:0005886(PANTHER)
Cec11g0058 869 CDD STKc_IRAK 540 803 - -
Cec11g0058 869 SMART serkin_6 534 801 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g0058 869 Gene3D Ribonuclease Inhibitor 26 246 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec09g2363 Cec-Chr9:40450966 Cec11g0058 Cec-Chr11:733511 2.50E-228 dispersed
Cec10g1412 Cec-Chr10:28462798 Cec11g0058 Cec-Chr11:733511 3.50E-74 dispersed
Cec10g2237 Cec-Chr10:36715447 Cec11g0058 Cec-Chr11:733511 1.00E-65 dispersed
Cec10g2238 Cec-Chr10:36723850 Cec11g0058 Cec-Chr11:733511 1.50E-67 dispersed
Cec11g0058 Cec-Chr11:733511 Cec11g1780 Cec-Chr11:31983638 4.50E-130 dispersed
Cec11g0058 Cec-Chr11:733511 Cec11g1781 Cec-Chr11:32008008 2.60E-133 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72369 PF07714 PK_Tyr_Ser-Thr 3.00E-48 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g0058 - - - 0.0