Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec11g0058 | ATGGCCGTTGAAGCTATGGTCAGTACAGGGGAGAAAGGGTCGTCAGAGCTATGGTTGGGGCAGGGAGAAAGGGTTGTTAGATCTATGGTCGGGGGTGTCATTCCCAAAACATTTTCAAATCTAACAAATCTGCAGACAGTATGGGCATCAGACAACGAACTCACCGGAGAAATACCTGGATTCATTGGGAGTTGGTTAAAACTCAGAACTTTGAGGTTTCAAGGAAACTCTTTCATGGGTCCCATACCATTGACACTTTCAAAATTGACAGCTCTGAATGAGTTGAGAATAAGTGATATGTCAAACGGGGGCTCTTCCCTAGAATTTATCAGGAATATGACGTCTTTGAAGACCCTAGTTTTGAGAAATAATAAAATATCAGATTCAATTCATTCCTACACTAGAGAGTTTGAAGAATTGAGCCTGCTAGACTTGAGTTTCAACATGTTAAAGGGAGATATTCCAAAGTGGCTTTTCAAGTTGAATAGTCTGTCATACTTGCTTCTTGGAAACAACAAGTTAACGGGCACACTACCTTCAGAGAAGTCTGACTCTCTTCTTTTTATAGACTTATCATACAATGCTTTATCAGGGGCCTTTCCTGACTGGGTCGATGGTTCAACCTTACAGTTAAATTTAGTTGCCAACAACTTCTCGTCAGGCAGTGCGAAAAGCAGCTATTTGCCTTCGGGTTTGGACTGTCTTCAACGAGAATTTTCTTGTAATGTATCTTCTGAACACCGTGAGTTAAGATCTAGTTTTGGGATCAACTGTGGAGGTGGAAAATTTGTGAGTGCCTCTGGGGGCCAGTATGAAAGGGAAAATGCGATTGTTGGTGCAGCAGCTTCATATTATGTTAGTGACTCGGAAACTTGGGCTGTTAGTGATGTCGGATACTTCCCTAAAAACACCAAAAGCTCTAGTAACTCTAGTAGTTATAACAGAGACAATGACACGACAGAATATATATTTGCAAATACAAGTGACTCAGAACTTTTTCAGACACAAGAATTATCTACTTCATCATTGAGGTTTTACGGACTAGAGCTTAAAAACGGGAACTACACTGTCAACCTTCAGTTTGCAGAACATGCATTCTCCAATTTATCTACATGGAGCAGCCTTGGGAGGCGCGTCTTTGATATATATATTCAGGGGAAACTTGTCCACAAGGATTTTAGTATTCAAAATGAGGCGGGTGGGTCTTTACGCGCTATTTCAAAGCCATTTAAGACACAAGTTTCAAAAAACTACATGGAAATCCATCTTTTTTGGGCTGGGAAAGGTACTTGCTGCATACCTGAAGAAGGTACTTTTGGTCCTTCTATTTCGGCAATCATTGCAAGTCTAGATTCGGAGCCTGGAAGTAATGAGAAGAATGGAACCAGTCAAATAAAGGTGACTAGTAGTAAGAAGAATGGAGCCAGTCTAATAGTGGGGATTGTTGTTGGTGTAGGATCTGTTTGCTTTCTAATTGTCACAATTTCCATTCTTTTCCATAGAAGGAAAGGTCGTTCCTCTGAAGGTGAAGAGCTCTTTGGAACTGATGAAAGACCACACACTTATAGTTATTCTGAACTAAGGAATGCTACAGAAGGTTTTAGTTCGTCCAACAAGCTTGGAGAAGGGGGGTTTGGACCTGTTTACAAGGGAATACTGAATGATGGAAGAGTAATTGCTGTAAAGCAACTATCTGTAAAATCTGACCAAGGAAGGAACCAGTTTGTGGCTGAGATTTCTATAATATCCGCCGTGCAACATCGCAACCTTGTGAAGTTGCATGGGTGTTGCATTGAGGACCACAATCGTCTCCTTGTTTATGAGTACCTGGAGAAAGGGAGTCTGGACCAAGCATTATTTGGAAAAAGAAACTTCACTCTTGATTGGCCGAAACGATTTGATATATGCTTGGGTGTGGCGAGAGGTCTGACTTATCTTCATGAGGAATCAAGGCTTCGAATTGTTCATAGAGATGTTAAAGCCAGTAACATTCTACTTGATGCTGATCTGAACCCCAAAATTTCAGATTTTGGTTTAGCAAAACTTTATGATGACAAAAAGACTCATATTAGCACCCTTGTTGCTGGGACAATTGGATATCTTGCACCCGAGTATGCCATGCGTGGCCATCTGACTGAGAAGGCTGATGTTTTTAGTTTTGGCGTTGTGGCACTTGAAATTGTCAGTGGTAGGCCAAATTCAGACCGAAGCTTGGAGGACAATGTTTTTCTTCTTGAATTGGCTTGGTACCTCTATGAAAACAATCGTGAAATCGAGTTGCTGGATTCAGATTTGTCGACATTCAATGAGGACGAAGTAAAGCGAGTGATCAGAGTAGGTCTTATGTGCACTCAAACATCCCCAGCTCGGCGACCATCAATGTCACGTGTGGTGGCAATGTTGTGTGGAGATACTGAAGTGGCTGCTATTACTTCAAAGCCAGGATACTTAACTGAATGGACCTTCGATGACGTAGTCACTTCTGCAAATGATACAACTATAGAAGGATCCAGCACTACCCATGAAGGCTCTTCAATCGGCCATCAATGTCAAGCTCCAAAGCCGCCATCGTCCAACCCTCCTCCACCATCCCAGGATGAGCTCAAGTGA | 2610 | 41.99 | MAVEAMVSTGEKGSSELWLGQGERVVRSMVGGVIPKTFSNLTNLQTVWASDNELTGEIPGFIGSWLKLRTLRFQGNSFMGPIPLTLSKLTALNELRISDMSNGGSSLEFIRNMTSLKTLVLRNNKISDSIHSYTREFEELSLLDLSFNMLKGDIPKWLFKLNSLSYLLLGNNKLTGTLPSEKSDSLLFIDLSYNALSGAFPDWVDGSTLQLNLVANNFSSGSAKSSYLPSGLDCLQREFSCNVSSEHRELRSSFGINCGGGKFVSASGGQYERENAIVGAAASYYVSDSETWAVSDVGYFPKNTKSSSNSSSYNRDNDTTEYIFANTSDSELFQTQELSTSSLRFYGLELKNGNYTVNLQFAEHAFSNLSTWSSLGRRVFDIYIQGKLVHKDFSIQNEAGGSLRAISKPFKTQVSKNYMEIHLFWAGKGTCCIPEEGTFGPSISAIIASLDSEPGSNEKNGTSQIKVTSSKKNGASLIVGIVVGVGSVCFLIVTISILFHRRKGRSSEGEELFGTDERPHTYSYSELRNATEGFSSSNKLGEGGFGPVYKGILNDGRVIAVKQLSVKSDQGRNQFVAEISIISAVQHRNLVKLHGCCIEDHNRLLVYEYLEKGSLDQALFGKRNFTLDWPKRFDICLGVARGLTYLHEESRLRIVHRDVKASNILLDADLNPKISDFGLAKLYDDKKTHISTLVAGTIGYLAPEYAMRGHLTEKADVFSFGVVALEIVSGRPNSDRSLEDNVFLLELAWYLYENNREIELLDSDLSTFNEDEVKRVIRVGLMCTQTSPARRPSMSRVVAMLCGDTEVAAITSKPGYLTEWTFDDVVTSANDTTIEGSSTTHEGSSIGHQCQAPKPPSSNPPPPSQDELK | 869 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 733511 | 755191 | - | CePI673135_11g000580.1 | Cec11g0058 | 215270 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec11g0058 | 869 | Gene3D | - | 252 | 449 | - | - | |
Cec11g0058 | 869 | SUPERFAMILY | L domain-like | 32 | 219 | - | - | |
Cec11g0058 | 869 | Gene3D | Transferase(Phosphotransferase) domain 1 | 610 | 813 | - | - | |
Cec11g0058 | 869 | MobiDBLite | consensus disorder prediction | 833 | 869 | - | - | |
Cec11g0058 | 869 | FunFam | Putative LRR receptor-like serine/threonine-protein kinase | 103 | 226 | - | - | |
Cec11g0058 | 869 | SUPERFAMILY | Protein kinase-like (PK-like) | 516 | 801 | IPR011009 | - | |
Cec11g0058 | 869 | FunFam | Putative LRR receptor-like serine/threonine-protein kinase | 610 | 813 | - | - | |
Cec11g0058 | 869 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 654 | 666 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec11g0058 | 869 | Gene3D | Phosphorylase Kinase; domain 1 | 497 | 609 | - | - | |
Cec11g0058 | 869 | Pfam | Protein tyrosine and serine/threonine kinase | 537 | 800 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec11g0058 | 869 | ProSiteProfiles | Protein kinase domain profile. | 534 | 807 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec11g0058 | 869 | MobiDBLite | consensus disorder prediction | 833 | 853 | - | - | |
Cec11g0058 | 869 | FunFam | Leucine-rich repeat receptor-like protein kinase | 503 | 609 | - | - | |
Cec11g0058 | 869 | Pfam | Malectin domain | 254 | 446 | IPR021720 | - | |
Cec11g0058 | 869 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED | 28 | 825 | IPR051824 | GO:0005886(PANTHER) | |
Cec11g0058 | 869 | CDD | STKc_IRAK | 540 | 803 | - | - | |
Cec11g0058 | 869 | SMART | serkin_6 | 534 | 801 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec11g0058 | 869 | Gene3D | Ribonuclease Inhibitor | 26 | 246 | IPR032675 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec09g2363 | Cec-Chr9:40450966 | Cec11g0058 | Cec-Chr11:733511 | 2.50E-228 | dispersed | |
Cec10g1412 | Cec-Chr10:28462798 | Cec11g0058 | Cec-Chr11:733511 | 3.50E-74 | dispersed | |
Cec10g2237 | Cec-Chr10:36715447 | Cec11g0058 | Cec-Chr11:733511 | 1.00E-65 | dispersed | |
Cec10g2238 | Cec-Chr10:36723850 | Cec11g0058 | Cec-Chr11:733511 | 1.50E-67 | dispersed | |
Cec11g0058 | Cec-Chr11:733511 | Cec11g1780 | Cec-Chr11:31983638 | 4.50E-130 | dispersed | |
Cec11g0058 | Cec-Chr11:733511 | Cec11g1781 | Cec-Chr11:32008008 | 2.60E-133 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72369 | PF07714 | PK_Tyr_Ser-Thr | 3.00E-48 | CL0016 | Cec | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec11g0058 | - | - | - | 0.0 |