Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g0067 ATGGGTTGCATTTGCTCGAAGGGAATTCCAGCTAACGACTATGTTGCTGAGAATCATTCCAAAGAGAGGCATTTGAAGTCTAATAGATCTTCCAGACATGGGGCTTCATTGAGGAAAGAAGAATCCGTGTTACATTCTGATGGAGGGCAAAGTGATGCAATGGCGCGATTGATATTGAACCAACATGGGGAAGAGAATGCTGGATCAACATCTGAATCGGATGATGCTGAGAAGGCAACACCCATTGGAAAAGCTGCCAGTGCCAAGCCACTGCGTCAAGAACAACGGCCAAGTATGGAGGATGGAGAAAAGAGAGTAGGAGTACATAACAATAATAATAATGCAACTCCTAGAATAATCGGTGTTGTAATTGGGGAAAAGGGGGCTTTGGTTATTGCTGGATGGCCTTCTTGGCTGACATCTGTGGCTGGAGAAGCAATCAATGGATGGGTTCCTAGAAAGGCAGACTCTTTTCAGAAGTTGGATAAGATTGGACAAGGAACGTACAGCAGTGTGTACAGGGCCCGTGATATTGAAACAAACAAGATTGTTGCATTGAAGAAGGTGCGATTTGCTAACATGGATCCTGAAAGTGTTCGTTTTATGGCCAGGGAAATTCTTATCCTACGTAGGCTTGACCACCCCAATGTCATGAAGCTTGAAGGTCTTATCACTTCAAGGGTATCGGGCAGTTTATACCTCATATTTGAGTATATGGAACATGATCTTGCAGGGTTGGTAGCAACCCCAGGGATCAAGTTCACTGAAGCACAGATAAAATGCTATATGAAACAGCTGCTTGGTGGCCTTGAACATTGCCATGCGCAGGGAGTTTTGCACCGTGACATCAAGGGCTCAAATCTTCTGATTGACAATAATGGTAATCTGAAGATAGGTGATTTTGGGCTATCAACCTTTTTCCGTTCCCGGCAAAAGCAGCCTCTTACAAGTCGTGTGGTAACTTTGTGGTATCGGCCACCTGAGCTTTTGCTTGGTGCAACGGACTATGGAGTTTCTGTAGATTTGTGGAGTGCTGGTTGCATTCTTGCAGAACTGTATGCTGGAAAGCCTATCATGCCTGGAAGAACAGAGGTGGAGCAACTACACAAGATCTTCAAACTCTGTGGCTCCCCGTCTGAAGAATACTGGAAAAAGTCAAAATTACCTCATGCCACCATCTTTAAACCTCAACATCCTTACAAGCGGTGTGTTGCTGAGACATTCAAAGACTTTCCTTTCTCTGCATTGGCCCTTTTGGATGTCCTTCTCGCAGTGGAACCTGATGGCCGTGGAACAGCGTCCTCTGCCCTTCAAAGTGAGTTCTTTACCACTGAACCGCTTCCCTCGGATCCCTCTGCTTTGCCAAAGTACCCACCTTGCAAGGAGTTTGATGTAAAGCTTCGAGATGAGGAATCTCGGAGAAGAAGAGCTCCTATCTGCATTGCACGTGAACATGAAGCAGCTCGTAAATTTTCCCGAGAATCAAAAGCAATTCCTGCACCAGATGCGAATGCTGAATTGCAGGCATCCATACAGAAGAAACAAGGGCAGCAGAATCCTACAAGTGTCAGTGAAAAGTATAATCATGAAGAGGACGGTGGCTCTGGCTTTTGCATCGGCCCCCCAAGAGAAGCAACGCAAATGCAGCCAACTGCATTGGGTTCTTCACGAAACATGAATGGAAGTCAGGGTGATAATCTAAGAGGTTCTTCAGTTGGGGCAAAAGGTGCAGAACTTAGAAAACAGAGATCTTTTATGCAGCATGGTGCTGGACAGTTATCTCGGTATTCCAATTCTGTTGCAGTTCGAGGTGGTTCACGATTTGGCTGTGGTGGAGAAAGTAGTGCTAATTCACACTGGCCAGAAGAGTGTTTTAATGTGTCATATAACCATTTCAATGGTGGCGACTCTTCAGAAAAGCATGAATGGTCTCACCATTTACTAGACAGGCCAAAATCTTCATATAAGATAGATGATCAATCATCTGGAAAAGAATCTACTATGAGTTATGCTCCGAAGAAGAGAATTCACTACTCAGGACCATTGATGCCTCCTGGGGGAAACCTTGAGGAAATGTTAAAAGAGCACGAGAAACAAATCCAGCATGCAGTGCGCAAGGCTCGTATTGACAAAGCTAAGACAAAAAAGACGTACGACGACAAAGGTCAGATGGAATCGTTGCTTCACCATGCGAGAAATGGCAATTGA 2208 44.97 MGCICSKGIPANDYVAENHSKERHLKSNRSSRHGASLRKEESVLHSDGGQSDAMARLILNQHGEENAGSTSESDDAEKATPIGKAASAKPLRQEQRPSMEDGEKRVGVHNNNNNATPRIIGVVIGEKGALVIAGWPSWLTSVAGEAINGWVPRKADSFQKLDKIGQGTYSSVYRARDIETNKIVALKKVRFANMDPESVRFMAREILILRRLDHPNVMKLEGLITSRVSGSLYLIFEYMEHDLAGLVATPGIKFTEAQIKCYMKQLLGGLEHCHAQGVLHRDIKGSNLLIDNNGNLKIGDFGLSTFFRSRQKQPLTSRVVTLWYRPPELLLGATDYGVSVDLWSAGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQHPYKRCVAETFKDFPFSALALLDVLLAVEPDGRGTASSALQSEFFTTEPLPSDPSALPKYPPCKEFDVKLRDEESRRRRAPICIAREHEAARKFSRESKAIPAPDANAELQASIQKKQGQQNPTSVSEKYNHEEDGGSGFCIGPPREATQMQPTALGSSRNMNGSQGDNLRGSSVGAKGAELRKQRSFMQHGAGQLSRYSNSVAVRGGSRFGCGGESSANSHWPEECFNVSYNHFNGGDSSEKHEWSHHLLDRPKSSYKIDDQSSGKESTMSYAPKKRIHYSGPLMPPGGNLEEMLKEHEKQIQHAVRKARIDKAKTKKTYDDKGQMESLLHHARNGN 735
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 826153 837557 + CePI673135_11g000670.1 Cec11g0067 215279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g0067 735 PANTHER CELL DIVISION PROTEIN KINASE 157 442 IPR050108 GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER)
Cec11g0067 735 FunFam probable serine/threonine-protein kinase At1g54610 241 481 - -
Cec11g0067 735 SMART serkin_6 158 442 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g0067 735 MobiDBLite consensus disorder prediction 510 524 - -
Cec11g0067 735 ProSiteProfiles Protein kinase domain profile. 158 442 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g0067 735 MobiDBLite consensus disorder prediction 548 567 - -
Cec11g0067 735 MobiDBLite consensus disorder prediction 18 112 - -
Cec11g0067 735 MobiDBLite consensus disorder prediction 705 735 - -
Cec11g0067 735 FunFam probable serine/threonine-protein kinase At1g54610 145 240 - -
Cec11g0067 735 Coils Coil 686 706 - -
Cec11g0067 735 SUPERFAMILY Protein kinase-like (PK-like) 152 449 IPR011009 -
Cec11g0067 735 ProSitePatterns Serine/Threonine protein kinases active-site signature. 278 290 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec11g0067 735 MobiDBLite consensus disorder prediction 510 567 - -
Cec11g0067 735 MobiDBLite consensus disorder prediction 705 727 - -
Cec11g0067 735 Pfam Protein kinase domain 158 442 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g0067 735 Gene3D Phosphorylase Kinase; domain 1 145 240 - -
Cec11g0067 735 Gene3D Transferase(Phosphotransferase) domain 1 241 480 - -
Cec11g0067 735 ProSitePatterns Protein kinases ATP-binding region signature. 164 187 IPR017441 GO:0005524(InterPro)
Cec11g0067 735 CDD STKc_CDK9_like 158 442 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g1107 Cec-Chr5:9800993 Cec11g0067 Cec-Chr11:826153 6.80E-193 dispersed
Cec08g0186 Cec-Chr8:3525833 Cec11g0067 Cec-Chr11:826153 4.50E-194 dispersed
Cec08g0290 Cec-Chr8:6246007 Cec11g0067 Cec-Chr11:826153 3.60E-118 dispersed
Cec10g1422 Cec-Chr10:28564247 Cec11g0067 Cec-Chr11:826153 1.00E-95 dispersed
Cec11g0067 Cec-Chr11:826153 Cec11g0476 Cec-Chr11:5119750 3.40E-147 dispersed
Cec11g0067 Cec-Chr11:826153 Cec05g0684 Cec-Chr5:5607655 3.40E-171 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72371 PF00069 Pkinase 5.10E-68 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g0067 - - - 0.0