Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g0073 ATGGCAATGCCACAAGTAGTTGTTGTCGTGTTGACGTTTTTGTTTTTGGGTTTAGCATCCAACGCTCAACTTTCCTCCACATTTTACGACCAAACTTGTCCCACTGCACTCACCACGATTAGAACGGATATTAGGCAAGCAATTTCTCGAGAACGTCGAATGGTTGCATCTCTCATTCGCCTCCATTTTCACGATTGCTTCGTTCAGGGTTGTGATGCGTCAATATTCCTTGACGATACTCCTTCTATGATTGGTGAACAAAATGCAGCACCCAATAGAAACTCTGCTAGAGGTTACGGGGTGATTCATAAGGCTAAGACTGAAGTTGAGAAGAAATGTCCCGGTGTTGTATCTTGTGCCGATATTCTTGCTGTGGCTGCAAGGGATGCTTCTTTTGCTGTTGGTGGTCCATCTTGGAAAGTAAAACTTGGAAGAAGAGACTCTACTACTGCAAGCAAAACTCTAGCAGAGAACGAGCTTCCACATTTCCAAGCAGGTCTTGAAAGGCTTATTTCCATTTTTGCAAATAAAGGTCTTAGTACCAGAGACATGGTTGCACTATCCGGTTCTCATACTATAGGACAAGCCCAATGCTTCCTTTTCCGCAATAGGATATACAACCAAAGTAATATTGACACAGGGTTTGCCAAGACTCGTCGCAGAATTGTCTAA 672 43.3 MAMPQVVVVVLTFLFLGLASNAQLSSTFYDQTCPTALTTIRTDIRQAISRERRMVASLIRLHFHDCFVQGCDASIFLDDTPSMIGEQNAAPNRNSARGYGVIHKAKTEVEKKCPGVVSCADILAVAARDASFAVGGPSWKVKLGRRDSTTASKTLAENELPHFQAGLERLISIFANKGLSTRDMVALSGSHTIGQAQCFLFRNRIYNQSNIDTGFAKTRRRIV 223
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 883704 884562 - CePI673135_11g000730.1 Cec11g0073 215285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g0073 223 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec11g0073 223 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec11g0073 223 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec11g0073 223 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec11g0073 223 Gene3D Peroxidase, domain 2 161 221 - -
Cec11g0073 223 PANTHER PEROXIDASE 72-RELATED 10 221 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec11g0073 223 CDD secretory_peroxidase 23 221 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cec11g0073 223 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Cec11g0073 223 Gene3D - 27 160 - -
Cec11g0073 223 Pfam Peroxidase 40 220 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec11g0073 223 FunFam Peroxidase 27 176 - -
Cec11g0073 223 SUPERFAMILY Heme-dependent peroxidases 23 221 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec11g0073 223 ProSiteProfiles Plant heme peroxidase family profile. 23 223 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec11g0073 223 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec11g0073 223 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec11g0073 223 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec11g0073 223 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec11g0073 223 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec11g0073 223 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec11g0073 223 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec11g0073 Cec-Chr11:883704 Cec11g0098 Cec-Chr11:1209959 8.40E-105 dispersed
Cec11g0073 Cec-Chr11:883704 Cec04g1355 Cec-Chr4:33177770 5.10E-54 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g0073 K00430 - csv:116403994 385.571