Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec11g0084 | ATGGCTGCATCTTCTTCCTCAGTTCCACTTTTTGGAGTTCGAGAAGAAGGGCAGATGAGAGGTCAGCAGCAGCAGCCGCCGCCGCCACCACCTCCCTCTAATTCTTCCACTGCTCCAAATCCTCAACAACCCCAAAAGAAAAAGAGAAACCAACCAGGAACTCCAAATCCAGATGCGGAAGTGATAGCGTTGAGTCCGAAGACGTTAATGGCAACAAACAGATTCATATGTGAAGTATGCAACAAAGGGTTTCAAAGAGAACAAAATCTACAACTGCATAGAAGAGGACACAATCTGCCATGGAAATTAAAGCAAAAAAGCACAAAAGAGCCAAAAAGAAAAGTGTATTTATGCCCAGAACCCACATGCGTACACCACGACCCATCAAGAGCACTTGGAGATTTAACAGGCATCAAGAAACACTACTCGAGAAAGCACGGCGAGAAGAAATGGAAGTGCGATAAATGCTCTAAACGTTACGCCGTTCAATCCGACTGGAAAGCCCATTCCAAAACCTGTGGCACCAGAGAATATCGCTGCGATTGTGGTACTCTCTTCTCCAGACGGGACAGTTTTATTACCCATAGAGCTTTTTGTGATGCATTGGCTCAAGAAAGTGCAAGACATCCTCCAAATTTAGGGTCTGCTATTGGAAGCCATTTATATGGAGGTAATAGCAATGTGGGTTTGACATTATCACAAGTCCCTCAAATTTCTTCTCTTCAAGACCATCCCAATATCCCCCAATCCCCTCACGACGTCCTCCGTCTCGGTGGCGGCCGAACCGGGCAATTCACTCATCTCCTCCCTCCTTCTATTGGCTCTTCCTTCCGACCCCCACCACAACAAGCAATGCCGTCGTCGAATAATGCCGCCGCGTTCTTCCTTTCGGACCAAACTAACCAAAGTAGCTTCCATGAAGATCATCATCAAAGCCAATCGCAACAAGGGTTGTTTGGAAACAAAGCCTTTCATGGGCTAATGCAATTCCCTTCTGATATCCAAACCCATGCAAGTAACAACAACAACAATTCTGCCTCAAATCTCTTCAATTTAGGCTTCATTTCAAATCCAACTGGTGATAATACTTCCAATATGAACAGTAACAACGACACCAACACTAACAATAGCAACAGCAGCAGCAACAACAACAACAATCTTCCATCCTCTTTGCTAAATCAATTCAATGGAACAAACAATGGCAACAATGACGGTCCTGCATCTAATATTTTCGCCGTTAACATAATGGGAGATCAAATCAATTCAGCTGCAGTTCCATCTCTCTACAGCACGGCCGCCCCGGGAGGATGTAGTAGCGGTACAAGCGGAGGAGCAATCCCACATATGTCAGCGACAGCACTTCTCCAAAAGGCAGCACAATTAGGCTCAACAACGTCGAGTAGCAACACTACAGCAACGTTGCTAAGGACATTTGGGAGCTCCTCAAGCTCAGCCGGGAAGGCGACGGATAGAACACTATTCCCACCAAGCTACGGTGGAGTAGTGTTTGGCGAGAACGAGAGCAATCTCCAGGATTTGATGAACTCGTTCACGACGGGGAGCTCGGGGAGCGGGATGTTCGGCAGCGGGATGAGCTCGTTCGGTGGATTTGAAGGGAGTAATCGAAACAATATGGAAAGTATGGAGGATCCAACGAAGTTACAACAGAATTTAAGCACAGTGAGTGTGGGAGGTGGGGCAGATAGGTTAACAAGAGACTTCTTAGGGGTTGGACAGGTTTTGAGAAGTATGAGCGGTGGTGGCGGTTATTCACAAAGAGAACATAAACAGCCACCGCAAGGGATAGTTTTGGAGGTGAAGAAGAGAAGAACGAAAACAAGTACAGACAGAAACAGATTTTTCAAATGCAACAAATATCAATGCCTGCCAACTTCAATCAGTGATCCAAAAATATCAGTGGATGGTGGAAGAATTCAAAGCTTTATACATTCTTTACATTAA | 1962 | 45.62 | MAASSSSVPLFGVREEGQMRGQQQQPPPPPPPSNSSTAPNPQQPQKKKRNQPGTPNPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEPKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARHPPNLGSAIGSHLYGGNSNVGLTLSQVPQISSLQDHPNIPQSPHDVLRLGGGRTGQFTHLLPPSIGSSFRPPPQQAMPSSNNAAAFFLSDQTNQSSFHEDHHQSQSQQGLFGNKAFHGLMQFPSDIQTHASNNNNNSASNLFNLGFISNPTGDNTSNMNSNNDTNTNNSNSSSNNNNNLPSSLLNQFNGTNNGNNDGPASNIFAVNIMGDQINSAAVPSLYSTAAPGGCSSGTSGGAIPHMSATALLQKAAQLGSTTSSSNTTATLLRTFGSSSSSAGKATDRTLFPPSYGGVVFGENESNLQDLMNSFTTGSSGSGMFGSGMSSFGGFEGSNRNNMESMEDPTKLQQNLSTVSVGGGADRLTRDFLGVGQVLRSMSGGGGYSQREHKQPPQGIVLEVKKRRTKTSTDRNRFFKCNKYQCLPTSISDPKISVDGGRIQSFIHSLH | 653 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 1068620 | 1072836 | - | CePI673135_11g000840.1 | Cec11g0084 | 215296 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec11g0084 | 653 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 77 | 97 | IPR013087 | - | |
Cec11g0084 | 653 | Gene3D | Classic Zinc Finger | 129 | 208 | - | - | |
Cec11g0084 | 653 | MobiDBLite | consensus disorder prediction | 360 | 403 | - | - | |
Cec11g0084 | 653 | FunFam | protein indeterminate-domain 12-like | 54 | 122 | - | - | |
Cec11g0084 | 653 | Pfam | BIRD-IDD transcription factor, fourth C2HC zinc finger | 177 | 212 | - | - | |
Cec11g0084 | 653 | MobiDBLite | consensus disorder prediction | 23 | 38 | - | - | |
Cec11g0084 | 653 | Pfam | Zinc-finger of C2H2 type | 75 | 97 | IPR013087 | - | |
Cec11g0084 | 653 | SMART | c2h2final6 | 116 | 146 | IPR013087 | - | |
Cec11g0084 | 653 | SMART | c2h2final6 | 75 | 97 | IPR013087 | - | |
Cec11g0084 | 653 | SMART | c2h2final6 | 151 | 171 | IPR013087 | - | |
Cec11g0084 | 653 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 75 | 97 | IPR013087 | - | |
Cec11g0084 | 653 | PANTHER | SERINE/THREONINE-PROTEIN KINASE RIO | 34 | 592 | IPR031140 | GO:0003700(PANTHER)|GO:0005634(PANTHER) | |
Cec11g0084 | 653 | MobiDBLite | consensus disorder prediction | 1 | 60 | - | - | |
Cec11g0084 | 653 | Gene3D | Classic Zinc Finger | 54 | 123 | - | - | |
Cec11g0084 | 653 | FunFam | protein indeterminate-domain 5, chloroplastic-like | 129 | 208 | - | - | |
Cec11g0084 | 653 | SUPERFAMILY | beta-beta-alpha zinc fingers | 74 | 171 | IPR036236 | - | |
Cec11g0084 | 653 | Pfam | BIRD-IDD transcription factor, second C2H2 zinc finger | 112 | 146 | - | - | |
Cec11g0084 | 653 | Pfam | BIRD-IDD transcription factor, third C2HC zinc finger | 150 | 174 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec09g0710 | Cec-Chr9:6352375 | Cec11g0084 | Cec-Chr11:1068620 | 2.20E-84 | dispersed | |
Cec10g2045 | Cec-Chr10:35188726 | Cec11g0084 | Cec-Chr11:1068620 | 3.30E-85 | dispersed | |
Cec01g1580 | Cec-Chr1:30412475 | Cec11g0084 | Cec-Chr11:1068620 | 9.10E-57 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
30479 | PF12171 | zf-C2H2_jaz | 4.10E-05 | CL0361 | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec11g0084 | K25870 | - | csv:101219959 | 976.852 |