Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g0089 ATGGATGAGCCAGCCATAGACAACCAGGCAATTTATAAGTCGATGACACATGAATCAATGACAGATGGCATTGTGATGATACATGAGATGACGACACAAGAGCTAGAGATAAATGTGCCATCGATGACTCAGAATTTGATGGCACACAAGCAACCAACTTATGATAATGATATGACACTTGAGCTGGTGAGCGTGAAGTCAAAGTTGGCCTTAATGAAGTCAGTCCTCACGAGCATAAAGTTAGAGTTGGCCACTGTCATGTTAAAGTTGAAGAGTATAACGTCAGTGTTACATTTGTTCTATAAGGAAAAGGTAGTCGAGGTGGAACAAGTGGTTCAACAGAAGGCTATTGAAGACCCATCGACCATAAAGAAAAAGGGCATGGATGTTGATGAGCGATCTGTTGCAAAATCATCACTTGCAGACTTGACTTTCTTCTCTAGTGTTGCTAACTTGCTATCGACCTCTTTTCTTGAAGGACAAGGCTGGGCCCTAGCCTTTGTAAAACGCAAGCTTCCTGTAATCTCTCTACCTCTCTCTTTCACGACGGTGATCTCTCTCTCACATTCATCACTCGCCGCCGCCGGCAGCTTCTCTCTCTCTGACGCCACCGCCGCCGGTAATCTCTCTCCCTTTCTCTCACTCATCTCTCAATCGCTCTCTCAACGCAGAGAAATTCAGATTGAGCATCAGCAGGTCCCACGACTAACAGCTGCTTGCTGCATCTCTCTTTCTTCAACTTCTGGCATAATTTTGATGGATGGATTTTACTTCCCCTTCCCCTTCCAAGTGCTACGTCTGACTGTCGCTCAATCTCCAGAATCGTTCGCAGGCGCAAGTTCTTTCCATCATTCATTATCGATGCTTCTGTTTAGACCGTTTGCTGATCTTGTTACCTTGGTTGGTGGCAGTGCAGGACATTCAGACAAGATGTCTCGGAAGGGTTTGATGGAACAAGACTTAAAGAAATTGGATGTGACAAAGCTCCATCCGCTCTCGCCAGAGGTTATATCTCGTCAAGCTACCATTAATATCGGTACTATTGGTCATGTGGCACATGGGAAGTCTACCGTTGTAAAAGCAATTTCAGGAGTCCAGACTGTACGTTTTAAGAATGAGCTGGAGCGTAACATTACTATTAAGCTGGGGTATGCTAATGCAAAGATATACAAATGTGAAGATGACAAGTGCCCTCGGCCTATGTGCTACAAGGCATATGGAAGTGGAAAGGAAGACAGTCCTTTATGTGATGTGCTTGGGTTTGAAAATTGCAGGATGAAACTATTGCGACATGTATCCTTTGTCGACTGCCCAGGTCACGATATTCTCATGGCTACCATGCTTAACGGAGCAGCCATTATGGATGGAGCATTACTTCTGATAGCTGCCAATGAAAGCTGCCCTCAACCTCAAACTTCTGAGCACCTTGCTGCTGTTGAAATTATGCGCCTTCAGCATATTATAATCCTCCAGAATAAAGTTGATCTTATTCAGGAAAATGTAGCAATCAATCAGCACGAAGCTATTCAAAAGTTCATTCAGGGAACTGTCGCTGATGGTGCACCAGTAGTACCAATTTCTGCTCAGCTGAAGTATAACATTGATGTTGTTTGCGAGTACATAGTTAAAAAGATTCCAATTCCAGAAAGGAATTTTGTCTCGCCTCCTAATATGATCGTGATTCGTTCTTTTGACGTTAACAAACCTGGATTTGAAGTTGATGAGATCAAAGGTGGTGTGGCTGGTGGTAGCATACTACGGGGTGTTTTAAAGGTGAATCAATTTATTGAAGTTCGCCCGGGTATTGTTGTTAAGGATGAAAGTGGTAACATCAAGTGCACCCCAATATACTCTAGGATTGTTTCTTTGTATGCGGAGCAAAATGAGCTGCAATTTGCAGTCCCTGGAGGTCTCATTGGGGTTGGCACGACCATGGATCCCACGTTGACTCGTGCTGACAGATTGGTCGGTCAGGTTCTTGGGGAAGTTGGATCACTTCCTGATGTTTTTGTTGAGCTAGAGGTAAACTTTTTCCTTTTGCGGCGGCTCCTAGGTGTGAGGACAAAAGGATCAGAAAGGCAGGGAAAAGTATCAAAACTGGCCAAGGGGGAGATTTTAATGTTGAACATAGGATCCATGTCTACGGGAGCTAGAGTACTTGCAGTGAAGAACGATCTAGCAAAGTTGCAGCTTACATCTCCTGTTTGCACCAGCAAAGGGGAGAAGATTGCTCTAAGTCGTCGAGTCGAGAAGCACTGGCGTCTTATTGGCTGGGGTCAAATTCAAGCTGGAACGACTCTCGATGTCCCTCCCTGCCCCATTTGA 2325 44.65 MDEPAIDNQAIYKSMTHESMTDGIVMIHEMTTQELEINVPSMTQNLMAHKQPTYDNDMTLELVSVKSKLALMKSVLTSIKLELATVMLKLKSITSVLHLFYKEKVVEVEQVVQQKAIEDPSTIKKKGMDVDERSVAKSSLADLTFFSSVANLLSTSFLEGQGWALAFVKRKLPVISLPLSFTTVISLSHSSLAAAGSFSLSDATAAGNLSPFLSLISQSLSQRREIQIEHQQVPRLTAACCISLSSTSGIILMDGFYFPFPFQVLRLTVAQSPESFAGASSFHHSLSMLLFRPFADLVTLVGGSAGHSDKMSRKGLMEQDLKKLDVTKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCEDDKCPRPMCYKAYGSGKEDSPLCDVLGFENCRMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIIILQNKVDLIQENVAINQHEAIQKFIQGTVADGAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFVSPPNMIVIRSFDVNKPGFEVDEIKGGVAGGSILRGVLKVNQFIEVRPGIVVKDESGNIKCTPIYSRIVSLYAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPDVFVELEVNFFLLRRLLGVRTKGSERQGKVSKLAKGEILMLNIGSMSTGARVLAVKNDLAKLQLTSPVCTSKGEKIALSRRVEKHWRLIGWGQIQAGTTLDVPPCPI 774
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1136408 1144402 - CePI673135_11g000890.1 Cec11g0089 215301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g0089 774 Pfam Initiation factor eIF2 gamma, C terminal 672 761 IPR015256 -
Cec11g0089 774 CDD eIF2_gamma_II 551 664 IPR044127 GO:0000049(InterPro)
Cec11g0089 774 FunFam Eukaryotic translation initiation factor 2 subunit gamma 667 766 - -
Cec11g0089 774 Pfam Elongation factor Tu GTP binding domain 342 546 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Cec11g0089 774 Pfam Elongation factor Tu domain 2 578 660 IPR004161 GO:0005525(InterPro)
Cec11g0089 774 FunFam Eukaryotic translation initiation factor 2 subunit gamma 340 550 - -
Cec11g0089 774 CDD eIF2_gamma_III 667 761 IPR015256 -
Cec11g0089 774 Gene3D Translation factors 667 766 - -
Cec11g0089 774 PRINTS GTP-binding elongation factor signature 487 496 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Cec11g0089 774 PRINTS GTP-binding elongation factor signature 344 357 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Cec11g0089 774 PRINTS GTP-binding elongation factor signature 449 460 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Cec11g0089 774 PRINTS GTP-binding elongation factor signature 433 443 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Cec11g0089 774 CDD eIF2_gamma 343 550 IPR044128 GO:0005525(InterPro)
Cec11g0089 774 Gene3D Translation factors 552 666 - -
Cec11g0089 774 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 340 549 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Cec11g0089 774 Gene3D - 340 550 IPR027417 -
Cec11g0089 774 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 665 762 IPR009001 -
Cec11g0089 774 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 333 552 IPR027417 -
Cec11g0089 774 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 3 FAMILY MEMBER 314 769 IPR050543 GO:0000049(PANTHER)|GO:0001731(PANTHER)|GO:0003743(PANTHER)|GO:0005829(PANTHER)|GO:0005850(PANTHER)
Cec11g0089 774 FunFam Eukaryotic translation initiation factor 2 subunit gamma 551 666 - -
Cec11g0089 774 SUPERFAMILY Translation proteins 550 664 IPR009000 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec09g0650 Cec-Chr9:5719234 Cec11g0089 Cec-Chr11:1136408 1.10E-13 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g0089 K03242 - csv:101220434 912.909