Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g0098 ATGTCTCGACTAGTTGTTGTTGCATTCACGTTGTTGCTTTTGGGTTTAGCATGCAATGCCCAACTTTCTTCTTCGTTTTACGACCAAACTTGTCCCTCTGCACTCACCACTATTAGAACAGTTATTAGGCAAGCGATCTCTCAAGAACGTCGTATGGCTGCGTCTCTCATTCGCCTCCATTTCCATGATTGTTTTGTTCAGGGATGCGACGCATCGATATTGCTTGATGATACTCCCTCGATGATTGGCGAACAAAATGCAGCACCCAACATAAATTCTGCTAGGGGTTACGGAGTGATACACAAGGCCAAGACTAAAGTTGAGAAGATATGTCCTGGTGTGGTATCTTGTGCAGATATTCTTGCTATAGCTGCAAGAGATGCTTCTTTTACCGTTGGTGGTCCATCTTGGACAGTAAGACTTGGAAGAAGAGACTCTACCACTGCAAGCAAAGCTCTAGCGGAGAGTGAGCTTCCACATTTCCAAGAAAGTCTTGATAGGCTAATTTCCATTTTTGCAAATAAAGGACTTAGTACGAGAGATATGGTTGCATTGTCAGGTTCTCATACTATAGGACAAGCTCAATGCTTTCTTTTCCGCAATAGGATATACAACCAAAGTAATATTGATGCAGGATTTGCTAGCACACGCCGTAGAAATTGTCCAACATCAGGTGGAAATGGAAATTTGGCACCACTTGATTTGGTCACACCCAATTCTTTTGACAATAATTACTTCAAAAATCTTGTTCAAAGAAAGGGTTTGCTAGAAACAGATCAAGTTCTCTTTAATGGAGGATCAACAGATAATATTGTTACAGAGTACAGTACAGATCCAACCGCATTCAAATCTGACTTTGCAGCTGCAATGATTAAAATGGGAGATATTCAACCTCTCACTGGTTCAGAAGGACAGATAAGAAACATATGTGGTGTTGTTAACTAA 945 40.95 MSRLVVVAFTLLLLGLACNAQLSSSFYDQTCPSALTTIRTVIRQAISQERRMAASLIRLHFHDCFVQGCDASILLDDTPSMIGEQNAAPNINSARGYGVIHKAKTKVEKICPGVVSCADILAIAARDASFTVGGPSWTVRLGRRDSTTASKALAESELPHFQESLDRLISIFANKGLSTRDMVALSGSHTIGQAQCFLFRNRIYNQSNIDAGFASTRRRNCPTSGGNGNLAPLDLVTPNSFDNNYFKNLVQRKGLLETDQVLFNGGSTDNIVTEYSTDPTAFKSDFAAAMIKMGDIQPLTGSEGQIRNICGVVN 314
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1209959 1211091 + CePI673135_11g000980.1 Cec11g0098 215310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g0098 314 FunFam Peroxidase 25 174 - -
Cec11g0098 314 ProSitePatterns Peroxidases active site signature. 53 64 IPR019794 GO:0004601(InterPro)
Cec11g0098 314 Pfam Peroxidase 38 278 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec11g0098 314 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec11g0098 314 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec11g0098 314 PRINTS Plant peroxidase signature 288 301 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec11g0098 314 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec11g0098 314 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec11g0098 314 PRINTS Plant peroxidase signature 232 247 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec11g0098 314 PRINTS Plant peroxidase signature 248 265 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec11g0098 314 PRINTS Plant peroxidase signature 133 148 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec11g0098 314 PRINTS Plant peroxidase signature 180 192 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec11g0098 314 ProSitePatterns Peroxidases proximal heme-ligand signature. 181 191 IPR019793 -
Cec11g0098 314 PRINTS Haem peroxidase superfamily signature 181 196 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec11g0098 314 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec11g0098 314 PRINTS Haem peroxidase superfamily signature 133 145 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec11g0098 314 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec11g0098 314 PRINTS Haem peroxidase superfamily signature 234 249 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec11g0098 314 PANTHER PEROXIDASE 72-RELATED 11 312 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec11g0098 314 FunFam Peroxidase 159 293 - -
Cec11g0098 314 CDD secretory_peroxidase 21 313 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cec11g0098 314 Gene3D - 26 310 - -
Cec11g0098 314 Gene3D Peroxidase, domain 2 159 293 - -
Cec11g0098 314 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Cec11g0098 314 ProSiteProfiles Plant heme peroxidase family profile. 21 314 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec11g0098 314 SUPERFAMILY Heme-dependent peroxidases 21 314 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec07g1845 Cec-Chr7:34119312 Cec11g0098 Cec-Chr11:1209959 4.90E-72 dispersed
Cec11g0073 Cec-Chr11:883704 Cec11g0098 Cec-Chr11:1209959 8.40E-105 dispersed
Cec11g0098 Cec-Chr11:1209959 Cec11g0607 Cec-Chr11:6671703 6.20E-106 dispersed
Cec11g0098 Cec-Chr11:1209959 Cec11g0099 Cec-Chr11:1215045 6.90E-129 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g0098 K00430 - csv:116403992 572.007