Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g0101 ATGGGTCTCTTCTTCTTCCTCTCTACAATGCCCATTTCAAGGCTTTGCCTATTTCTCGCCTTCTTTCCGCTGTTTCTTTCACCCCTTTCCGCCGCCGCCGCCGCCGCCGCCCATGACCGGAGCTTCCTCCTCCTCCGCCACCACCGCCACCTCCTCCACCAAGCCTTTTTCCCATGGACTTCTTTACCTCCATCTCAAGCTCCATCTTCTCTTTCTCCCTTGCCTCAACCACAGCACCAACAGCCTAAACTCCCCTTTTCTTCTACTTCATTTTCCTCGCCCCCAAAACCCTTTTTTCCATCCTACCCTTCGTCGCCGCCGCCGCCTCCGTCGCCTCCTTCGACGGCGCTCCCTACATTTCCGGCCAATATTTCTGCTCTTCTCTTTCCGCAGCCTACTTCTTCTTCCCAACACCTCCACCGCCATGTCTTTGCCATTGTCATCTCTGTTTCTCTTGTCTTCTCTGTTCTTGTTTTTCTCGTTGCTCTGTACTTTTACTTTCGAAAGCGGAACCGACAAATCTCTGCTACTGATAAGGCCTCGAGAACAGATAATCTCCGGCTGTATCCGCCGGATATTGACACTTCTGATGGAGTTCACAAACACAGAACCTCCTCCACCACCAGCTCCAAATTTCTTTATCTTGGGACTTTGGCTACTTCTCGAGAGATTGATGAGGAGGCCGCCGGAAATGTGGAGGACGGTGGCGGCGGGGTCGTGGAGTCTGTTTCTCCGGTGAAAATGGGATCGCCGGAGCTGAAGCCCCTTCCACCGCTTCCTCGCCGGAATTTCGCCGAAGATTATCAGAGGAATGTTGATAGTAATGACAACGATGATGACGAAGAAGATCGCGACGATGAAGAGTTCTTTTCGCCAAGAGGGTCTTCTGTCGGCGGGAAGGATAATGTGGGGAGTAATAGAAGATTGAGCCCTGTGAAGTTGTTTCATAATGTGGAAACTGAAAATTTCTTAAGGAAAAGCTATAATTCCAGTTTGAATTCTGGTTCTCGCTCTGTTTCTGTTCCCAATAGTCCTTCTCCGCCATTGATGTTGAGCCCCACGAGTTTGAGGTCGAAGTCGCCTGACTCCATTATCAGATTCCCTGTTCTTTTACGGCCATTGCCAACACTTCCGGTACCGCCATCACCGTCGTTGTCCTCTGCTTCTTCACCACTGGGAGGTTCAGGGAACACCAAGAACTCGCCGTCGAGAGATTCCGATTTGTCAGAGCTGCATCGACAGTGTTCAAATGGTTTTAGGATGGATTACCAGCAACCATTACCGGTAAAACTACCACCACCCCGGCCACCACCACCGCCGCCACCTCCTCCAATGTTTTGGGAGATTCCTCAATCTTCCTCTCTTCTCAACAAGGAACCAAATCTAGGTCCACCGGTACTCACCGTGCCATCGAGACCGATACTCTCACAGAACATAGCTCATATGTCAGCAGGGGAGCAATCAAACACCAATGGAGATGCAGAGAGAATGGAAGAAAATACGAAGCCGAAACTGAAGGCCTTGCATTGGGACAAAGTTCGGACGAGCTCCGATCGAGCCATGGTGTGGGATCAGATCAAGTCGAGTTCTTTTCAGTTGAATGAGGAAATGATTGAATCACTTTTTATGGTGAATAACAATAATTCAAGTCTGATGAGCAAGGAAAATGGTAGTGTTCGTCAAAACATGCCTTTAGGGAGCCAAGAGAATCGAGTTCTTGATCCTAAGAAATCTCAGAATATTGCAATTTTGTTGAGGGCACTTAATGTTACCATTGAAGAAGTCTCAGAGGCCCTTTTGGAAGGAAATTCAGATACTTTGTGTACCGAACTGCTAGAAAGTTTACTAAAAATGGCACCGACCGAAGAAGAAGAACGTAATTTGAAAGAATACAAAGATGATTCACCTTTTAAACTTGGCCCAGCTGAGAAATTCCTCAAGGTAGTTCTCGATGTACCATTTGCATTCAAAAGGGTGGATGCAATGCTTTACATTGCTAATTTCGAATCTGAGGTCGAGTACCTCAATCGGTCCTTTGAAACTCTTGAGGCTGCTTGTATAGAATTGAAGAACAGCAGAATGTTTCTCAAACTTCTTGAAGCAGTGCTCAAAACCGGGAACCGGATGAATGTAGGCACGAACCGAGGCGATGCACATGCTTTTAAACTCGACACCCTTCTCAAGCTTGTCGATATCAAGGGCACTGATGGAAAGACCACTCTCTTGCATTTCGTAGTGCAGGAGATTATTAGAGCTGAAGGTTATCGACACTCCACCTCTGACCTCAACCTGACAGCTGATAAAACTCAACAATCTTCCTTAACAAATGACATCGAGTTTCGGAAGCTTGGTCTTCAAGTTGTTTCAGGTCTTAGTAGGGAGCTATCCAATGTGAAAAAAGCTGCATTAATGGATGCAGATGTGCTTAGCAATGACGTAGGGAAACTCGCTGGAGGGATCACAAAAATCACTGAGGTCATTAGATTAAACGAAGACATGTCGAGAGGAGGGAGTAAGTCAAATTTCTCGGACTCCATGAACAGGTTCTTGGGGAGGGCAGCTGAAGAAGTAGCAAGGGTACAAGTCAAAGAGCGCATTGTCCTCTCCATGGTAAAGGAAATAACCGAATACTTTCATGGAAACTTAGCGAAAGAAGAAGCTCGGCCGCTGCGTATATTCATGGTGGTAAAGGATTTTCTTGCAATCTTAGATCAGGTATGCAAAGAAGTCGGAAGAATCAATGAAAGAACAATAGTTGGTTCGGCTCGTCAATTTACGGGCCCTCCGAATCCATGTCTTCCATCGATTTTCCCTGGATTATGCGAAAGTCAGCGCTATGGTTCCTCTGATGATGATAGCTCATCTTCCTCATCTTAG 2877 46.96 MGLFFFLSTMPISRLCLFLAFFPLFLSPLSAAAAAAAHDRSFLLLRHHRHLLHQAFFPWTSLPPSQAPSSLSPLPQPQHQQPKLPFSSTSFSSPPKPFFPSYPSSPPPPPSPPSTALPTFPANISALLFPQPTSSSQHLHRHVFAIVISVSLVFSVLVFLVALYFYFRKRNRQISATDKASRTDNLRLYPPDIDTSDGVHKHRTSSTTSSKFLYLGTLATSREIDEEAAGNVEDGGGGVVESVSPVKMGSPELKPLPPLPRRNFAEDYQRNVDSNDNDDDEEDRDDEEFFSPRGSSVGGKDNVGSNRRLSPVKLFHNVETENFLRKSYNSSLNSGSRSVSVPNSPSPPLMLSPTSLRSKSPDSIIRFPVLLRPLPTLPVPPSPSLSSASSPLGGSGNTKNSPSRDSDLSELHRQCSNGFRMDYQQPLPVKLPPPRPPPPPPPPPMFWEIPQSSSLLNKEPNLGPPVLTVPSRPILSQNIAHMSAGEQSNTNGDAERMEENTKPKLKALHWDKVRTSSDRAMVWDQIKSSSFQLNEEMIESLFMVNNNNSSLMSKENGSVRQNMPLGSQENRVLDPKKSQNIAILLRALNVTIEEVSEALLEGNSDTLCTELLESLLKMAPTEEEERNLKEYKDDSPFKLGPAEKFLKVVLDVPFAFKRVDAMLYIANFESEVEYLNRSFETLEAACIELKNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRAEGYRHSTSDLNLTADKTQQSSLTNDIEFRKLGLQVVSGLSRELSNVKKAALMDADVLSNDVGKLAGGITKITEVIRLNEDMSRGGSKSNFSDSMNRFLGRAAEEVARVQVKERIVLSMVKEITEYFHGNLAKEEARPLRIFMVVKDFLAILDQVCKEVGRINERTIVGSARQFTGPPNPCLPSIFPGLCESQRYGSSDDDSSSSSS 958
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1230218 1234425 - CePI673135_11g001010.1 Cec11g0101 215313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g0101 958 Gene3D Formin, FH2 domain 493 913 IPR042201 -
Cec11g0101 958 ProSiteProfiles Formin homology-2 (FH2) domain profile. 495 929 IPR015425 -
Cec11g0101 958 MobiDBLite consensus disorder prediction 330 359 - -
Cec11g0101 958 MobiDBLite consensus disorder prediction 67 116 - -
Cec11g0101 958 MobiDBLite consensus disorder prediction 96 116 - -
Cec11g0101 958 MobiDBLite consensus disorder prediction 273 287 - -
Cec11g0101 958 MobiDBLite consensus disorder prediction 427 448 - -
Cec11g0101 958 MobiDBLite consensus disorder prediction 386 404 - -
Cec11g0101 958 MobiDBLite consensus disorder prediction 380 409 - -
Cec11g0101 958 PANTHER FORMIN-RELATED 25 952 IPR027643 GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro)
Cec11g0101 958 SUPERFAMILY Formin homology 2 domain (FH2 domain) 432 916 - -
Cec11g0101 958 MobiDBLite consensus disorder prediction 227 308 - -
Cec11g0101 958 SMART it6_source 495 918 IPR015425 -
Cec11g0101 958 MobiDBLite consensus disorder prediction 67 95 - -
Cec11g0101 958 Pfam Formin Homology 2 Domain 498 903 IPR015425 -
Cec11g0101 958 Coils Coil 665 685 - -
Cec11g0101 958 MobiDBLite consensus disorder prediction 423 450 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g1767 Cec-Chr3:35954173 Cec11g0101 Cec-Chr11:1230218 6.80E-105 dispersed
Cec05g1657 Cec-Chr5:27272658 Cec11g0101 Cec-Chr11:1230218 5.80E-98 dispersed
Cec07g0284 Cec-Chr7:2808091 Cec11g0101 Cec-Chr11:1230218 3.70E-166 dispersed
Cec08g0918 Cec-Chr8:21009271 Cec11g0101 Cec-Chr11:1230218 8.00E-69 dispersed
Cec11g0101 Cec-Chr11:1230218 Cec02g0866 Cec-Chr2:10756652 5.60E-97 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g0101 K28090 - csv:101213912 1348.95