Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g0147 ATGGGCGCTTTTGGAATTGTGTTCTTCTTCCTCCTCCTTGTCGTTGTGTTTCCTTTGTCTTCTCCTTTGTCCGAGAACGAAGCTCTTTTGAAACTCAAACAATCCTTCACCCATTCCGAATCCTTGAATTCTTGGAACTCTGACTCTGTCCCTTGCTCCGCTCGATGGACCGGCATTATCTGTAATAGAGGCGTTATCACCGGCCTACATCTCTCCGGCCTCCAACTCTCCGGAAAAATCGACGTCGAAGCTCTTCTTCAGCTTCGTAGCCTTCGAACCATTAGCTTCGTTAACAACAAATTCTCCGGTCCGATTCCGGAATTCAACAAAATCGGAGTTCTAAAATCTCTTCTCTTAACCGGAAACCACTTCTCCGGCGCTATCCCAAACGATTTCTTCTCTTCCTTAACTTCTTTAAAAAAGGTTTGGCTCTCTTCAAACAATTTCTCCGGTAACATTCCAAATTCTCTAGCTCAACTCTCCCATTTAATCGAACTCCATCTCGAGAGCAACCAATTTTCAGGACCAATCCCAAATCTCAAATACGCTTCAATTATAAAATCCCTTGATCTCTCCAACAACAAACTCGAAGGTCAAATTCCCGAAACCCTTTCAAAATTCGACGCAAAAGCATTCGCTGGAAATGAAGGCCTTTGCGGAAACCCACTCCCGAAATCTTGCGGCGAAAACGCTGGACGAATTTCTGAAGAGAAACCCCTTTCTTCTTCTTCACCTCCTGGGGAATCGCAAAGCAATGTTTCGAAATTGGTTGTGGCTTCATTGATAGCCGTGGTTGTATTTCTAATGGTGTTTATATTTTTGAGTGCTTCAAAGCGCAGAGAAGATGAGTTCAGTGTATTGGGGAGAGAACAAATGGAGGAAGTTGTGGAGGTTCATGTACCGAGTTCCGGCGGCGGCCATGATAAGCAATCCAGCAGAAGAGGTGGGGATTCTAAGAGAGGATCGCAACAGGGGAAGGCGGGAATGAGCGATCTTGTGGTGGTTAATGAAGATAAAGGGACGTTTGGTTTGGCGGATTTGATGAAGGCTGCGGCGGAGGTTTTAGGGAATGGTGGGTTGGGTTCGGCTTACAAGGCGGTTATGTCCAATGGGTTGTCGGTGGTGGTGAAGAGAATGAGAGAGATGAATAAATTAGGGAAAGATGGGTTCGATGCGGAGATGAGACGACTTGGAAGATTGCGCCATCAGAATATATTAACGCCTTTGGCCTATCATTACAGGAGAGAGGAGAAATTGCTTGTGTCCGAGTACATTCCAAAGGGTAGCCTCTTGTATGTGTTGCATGGTGATCGTGGAGCCTGCCATGCAGATCTCAATTGGGCCACTCGGTTAAGGATCGTGCATGGGATTGCAAGGGGATTGGGATTCCTCCATTCAGAATTTGCAACGTATGATCTGCCGCATGGGAATCTGAAATCCAGCAACGTTCTTCTAAGCGACAACTATGAGCCACTTTTGAGCGACTACGCATTCCATCCCCTTATCAATCCCAACAATGCAACTCAGGCAATGTTCGCTTACAAATCCCCTGAGTACGGGCAATACCAGGAAGTCTCTCCCAAGTCTGATGTTTATTGTCTTGGCATTATCATTCTTGAAATCATGACTAGTAAATTTCCTTCTCAATATCTTACAAATGGCAAGGGTGGTACTGATGTGGTGCAGTGGGTCTCATCTGCAATTTCTGAGAAGAGGGAGGCTGAACTCATTGACCCTGAGATTGCAAACGACACCGGTGCACTCAATCACATGGTCCAGCTTCTCATAATTGGCGCGGATTGCACCCACAATAATCCTCAGCAACGGCCAGAAATGAGGGAAGCCATTAGGAGAATAGAAGAGATATGA 1869 45.96 MGAFGIVFFFLLLVVVFPLSSPLSENEALLKLKQSFTHSESLNSWNSDSVPCSARWTGIICNRGVITGLHLSGLQLSGKIDVEALLQLRSLRTISFVNNKFSGPIPEFNKIGVLKSLLLTGNHFSGAIPNDFFSSLTSLKKVWLSSNNFSGNIPNSLAQLSHLIELHLESNQFSGPIPNLKYASIIKSLDLSNNKLEGQIPETLSKFDAKAFAGNEGLCGNPLPKSCGENAGRISEEKPLSSSSPPGESQSNVSKLVVASLIAVVVFLMVFIFLSASKRREDEFSVLGREQMEEVVEVHVPSSGGGHDKQSSRRGGDSKRGSQQGKAGMSDLVVVNEDKGTFGLADLMKAAAEVLGNGGLGSAYKAVMSNGLSVVVKRMREMNKLGKDGFDAEMRRLGRLRHQNILTPLAYHYRREEKLLVSEYIPKGSLLYVLHGDRGACHADLNWATRLRIVHGIARGLGFLHSEFATYDLPHGNLKSSNVLLSDNYEPLLSDYAFHPLINPNNATQAMFAYKSPEYGQYQEVSPKSDVYCLGIIILEIMTSKFPSQYLTNGKGGTDVVQWVSSAISEKREAELIDPEIANDTGALNHMVQLLIIGADCTHNNPQQRPEMREAIRRIEEI 622
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1732035 1734371 + CePI673135_11g001470.1 Cec11g0147 215359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g0147 622 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 24 622 IPR046959 -
Cec11g0147 622 Gene3D Phosphorylase Kinase; domain 1 317 424 - -
Cec11g0147 622 Gene3D Transferase(Phosphotransferase) domain 1 425 622 - -
Cec11g0147 622 Pfam Leucine rich repeat N-terminal domain 24 62 IPR013210 -
Cec11g0147 622 Gene3D Ribonuclease Inhibitor 23 182 IPR032675 -
Cec11g0147 622 SUPERFAMILY L domain-like 23 206 - -
Cec11g0147 622 MobiDBLite consensus disorder prediction 236 250 - -
Cec11g0147 622 MobiDBLite consensus disorder prediction 230 250 - -
Cec11g0147 622 FunFam Nuclear pore complex protein NUP107 23 179 - -
Cec11g0147 622 Gene3D Ribonuclease Inhibitor 183 230 IPR032675 -
Cec11g0147 622 SUPERFAMILY Protein kinase-like (PK-like) 353 618 IPR011009 -
Cec11g0147 622 ProSiteProfiles Protein kinase domain profile. 349 622 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g0147 622 Pfam Leucine Rich Repeat 187 206 IPR001611 GO:0005515(InterPro)
Cec11g0147 622 Pfam Protein kinase domain 353 616 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g0147 622 MobiDBLite consensus disorder prediction 298 329 - -
Cec11g0147 622 Pfam Leucine rich repeat 114 173 IPR001611 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec08g1291 Cec-Chr8:24893880 Cec11g0147 Cec-Chr11:1732035 1.70E-100 dispersed
Cec11g0147 Cec-Chr11:1732035 Cec11g0278 Cec-Chr11:3025179 7.30E-66 dispersed
Cec01g1526 Cec-Chr1:29863629 Cec11g0147 Cec-Chr11:1732035 5.70E-34 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72373 PF00069 Pkinase 5.10E-26 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g0147 K28077 - csv:101215919 1066.22