Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g0155 ATGGCGGTGAAGAAAATGAAGTGGAGATCCATTTTCTCCAGCTGCTGCGAGGTTGATTCGCAGTCGTCGGAGGTGATGAAAGTAGTGGCGGCGAATAAGCCGAGTTCCTTCCAAAGGATTTCGAAACTGGATTTGAGTAACCCTAATTCCACTCTCTCTGAAGATCTTTCCATTTCACTCGCCGGATCTGACATCCACGCTTTCACTCTCGCCGAATTGAAGCTCATCTCTCAGACCTTTTCTTCCTCAAACTTCCTTGGAGAAGGTGGATTCGGCCCCGTCTACAAAGGATTCCTCGATGACAATCTCAGGGCTGGCTTGTCTCCTCAGCCCGTCGCTATTAAACTCCTCGATTTGGATGGAACACAAGGCCACAGAGAATGGCTGACGGAGGTGATTTTTCTAGGACAGCTTAAGCACGCTCATCTAGTGAAGCTAATTGGATATTGCTGCGAAGACGAACATAGGATGCTTGTGTATGAGTATATGCCCAGAGGAAGCTTGGAGAATCAACTTTTCAAAAAATATTCGATCCCATTGCCATGGTCGACGAGAATGAAGATCGCTCTTGGAGCTGCCAAGGGTCTGGCCTTCCTCCACGAAGCAGATAAACCAGTCATTTACCGAGATTTCAAAGCCTCCAACATACTGCTCGACTCTGATTATAACGCGAAGCTGTCTGATTTTGGACTAGCCAAAGACGGTCCAGAAGGAGACAACACGCATGTCTCGACCCGAGTAATGGGGACGCATGGATATGCTGCGCCGGAGTATATAATGACGGGTCATTTGACGGCGATGAGTGACGTGTATAGCTTCGGAGTAGTGCTTTTGGAGTTGTTGACAGGGCGGCGGTCGGTGGAGAAGAGCAGCCGTAAGAGGCAACAGAACTTGGCAGAGTGGGCGAGGCCGATGCTGAATGATCCAAGGAAGCTAAGCCGTATAATAGACCCAAGACTTGAAGGCCAATACTCGGAAATGGGAGCTCAGAAAGCAGCCACATTGGCTTACCAATGCTTGAGCCACCGCCCAAAGCAGAGGCCCACCATGAGCGCCGTCGTCAAGGTATTAGAGCCGCTTAAGGATTTCGATGACATTTCTTCAGGCACCTTCGTTTATACGGTTCTCGCCCAAAACGATCTTCACAACAAACCAATAGGAAATTCAACTTTAGAAGAAGCTAAAAAGTAA 1191 48.61 MAVKKMKWRSIFSSCCEVDSQSSEVMKVVAANKPSSFQRISKLDLSNPNSTLSEDLSISLAGSDIHAFTLAELKLISQTFSSSNFLGEGGFGPVYKGFLDDNLRAGLSPQPVAIKLLDLDGTQGHREWLTEVIFLGQLKHAHLVKLIGYCCEDEHRMLVYEYMPRGSLENQLFKKYSIPLPWSTRMKIALGAAKGLAFLHEADKPVIYRDFKASNILLDSDYNAKLSDFGLAKDGPEGDNTHVSTRVMGTHGYAAPEYIMTGHLTAMSDVYSFGVVLLELLTGRRSVEKSSRKRQQNLAEWARPMLNDPRKLSRIIDPRLEGQYSEMGAQKAATLAYQCLSHRPKQRPTMSAVVKVLEPLKDFDDISSGTFVYTVLAQNDLHNKPIGNSTLEEAKK 396
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1786763 1788620 - CePI673135_11g001550.1 Cec11g0155 215367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g0155 396 ProSiteProfiles Protein kinase domain profile. 80 361 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g0155 396 FunFam Probable serine/threonine-protein kinase PBL8 163 375 - -
Cec11g0155 396 PANTHER OS01G0588500 PROTEIN-RELATED 55 361 IPR050823 -
Cec11g0155 396 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec11g0155 396 SUPERFAMILY Protein kinase-like (PK-like) 56 358 IPR011009 -
Cec11g0155 396 CDD STKc_IRAK 86 360 - -
Cec11g0155 396 FunFam Serine/threonine-protein kinase BIK1 47 162 - -
Cec11g0155 396 Gene3D Transferase(Phosphotransferase) domain 1 163 371 - -
Cec11g0155 396 Gene3D Phosphorylase Kinase; domain 1 44 162 - -
Cec11g0155 396 Pfam Protein tyrosine and serine/threonine kinase 84 357 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec11g0155 Cec-Chr11:1786763 Cec11g1169 Cec-Chr11:23979325 1.40E-110 dispersed
Cec03g1521 Cec-Chr3:33304435 Cec11g0155 Cec-Chr11:1786763 5.40E-120 transposed
Cec05g1753 Cec-Chr5:29173609 Cec11g0155 Cec-Chr11:1786763 1.40E-124 transposed
Cec07g1224 Cec-Chr7:27742574 Cec11g0155 Cec-Chr11:1786763 3.60E-125 transposed
Cec10g2292 Cec-Chr10:37080301 Cec11g0155 Cec-Chr11:1786763 1.20E-101 transposed
Cec11g0155 Cec-Chr11:1786763 Cec03g1566 Cec-Chr3:33778080 4.20E-168 wgd
Cec11g0155 Cec-Chr11:1786763 Cec09g0102 Cec-Chr9:852336 1.10E-120 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72374 PF07714 PK_Tyr_Ser-Thr 1.70E-47 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g0155 - - - 0.0